Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g066650 Medicago truncatula HOM05D000435 ORTHO05D010267 4.4e-53 211.1 109 100.0
Lj5g0001637 Lotus japonicus HOM05D000435 ORTHO05D007717 1.8e-14 82.8 57 78.9
AUR62039560 Chenopodium quinoa HOM05D000435 ORTHO05D007717 3.0e-14 82.0 84 59.5
Psat6g221400 Pisum sativum HOM05D000435 ORTHO05D007717 4.0e-14 81.6 57 77.2
TPR.G4902 Trifolium pratense HOM05D000435 ORTHO05D007717 4.0e-14 81.6 70 65.7
Lalb_Chr02g0145491 Lupinus albus HOM05D000435 ORTHO05D007717 6.8e-14 80.9 70 67.1
Lj6A748T52 Lonicera japonica HOM05D000435 ORTHO05D007717 8.9e-14 80.5 107 46.7
Medtr1g108340 Medicago truncatula HOM05D000435 ORTHO05D007717 8.9e-14 80.5 57 75.4
Glyma.20G125600 Glycine max HOM05D000435 ORTHO05D007717 1.2e-13 80.1 57 75.4
Sed0013515 Sechium edule HOM05D000435 ORTHO05D007717 1.2e-13 80.1 66 65.2
Hund24996 Selenicereus undatus HOM05D000435 ORTHO05D007717 1.2e-13 80.1 58 74.1
Sc11g0004030 Simmondsia chinensis HOM05D000435 ORTHO05D007717 1.5e-13 79.7 58 74.1
ClCG05G022200 Citrullus lanatus HOM05D000435 ORTHO05D007717 2.0e-13 79.3 66 65.2
Migut.E00410 Erythranthe guttata HOM05D000435 ORTHO05D007717 2.0e-13 79.3 65 66.2
Oeu044341.1 Olea europaea HOM05D000435 ORTHO05D007717 2.0e-13 79.3 65 66.2
Aa31LG2G8600 Aethionema arabicum HOM05D000435 ORTHO05D007717 2.6e-13 79.0 57 75.4
Prupe.1G322600 Prunus persica HOM05D000435 ORTHO05D007717 2.6e-13 79.0 57 73.7
Glyma.10G264900 Glycine max HOM05D000435 ORTHO05D007717 3.4e-13 78.6 57 73.7
Manes.06G061400 Manihot esculenta HOM05D000435 ORTHO05D007717 3.4e-13 78.6 86 55.8
Atru.chr11.413 Acer truncatum HOM05D000435 ORTHO05D007717 4.4e-13 78.2 83 55.4
arahy.Tifrunner.gnm1.ann1.X7UDDV Arachis hypogaea HOM05D000435 ORTHO05D007717 4.4e-13 78.2 57 75.4
arahy.Tifrunner.gnm1.ann1.XA63TZ Arachis hypogaea HOM05D000435 ORTHO05D007717 4.4e-13 78.2 57 75.4
Eucgr.B02893 Eucalyptus grandis HOM05D000435 ORTHO05D007717 4.4e-13 78.2 57 73.7
GSVIVG01011781001 Vitis vinifera HOM05D000435 ORTHO05D007717 4.4e-13 78.2 57 75.4
MSTRG.13574 Avicennia marina HOM05D000435 ORTHO05D007717 5.8e-13 77.8 61 67.2
BcaB07g30406 Brassica carinata HOM05D000435 ORTHO05D007717 5.8e-13 77.8 57 73.7
BcaC03g17022 Brassica carinata HOM05D000435 ORTHO05D007717 5.8e-13 77.8 57 73.7
A02p31890 Brassica napus HOM05D000435 ORTHO05D007717 5.8e-13 77.8 57 73.7
C02p49340 Brassica napus HOM05D000435 ORTHO05D007717 5.8e-13 77.8 57 73.7
BolC2t11021H Brassica oleracea HOM05D000435 ORTHO05D007717 5.8e-13 77.8 57 73.7
BraA02t08199Z Brassica rapa HOM05D000435 ORTHO05D007717 5.8e-13 77.8 57 73.7
CARHR143840 Cardamine hirsuta HOM05D000435 ORTHO05D007717 5.8e-13 77.8 57 73.7
CsaV3_5G034920 Cucumis sativus L. HOM05D000435 ORTHO05D007717 5.8e-13 77.8 57 70.2
Thhalv10000791m.g Eutrema salsugineum HOM05D000435 ORTHO05D007717 5.8e-13 77.8 57 73.7
Phvul.007G036800 Phaseolus vulgaris HOM05D000435 ORTHO05D007717 5.8e-13 77.8 57 71.9
Sp2g12770 Schrenkiella parvula HOM05D000435 ORTHO05D007717 5.8e-13 77.8 57 73.7
VMungo0720G0078 Vigna mungo HOM05D000435 ORTHO05D007717 5.8e-13 77.8 57 71.9
AL5G10280 Arabidopsis lyrata HOM05D000435 ORTHO05D007717 7.5e-13 77.4 57 73.7
Carub.0005s0029 Capsella rubella HOM05D000435 ORTHO05D007717 7.5e-13 77.4 57 73.7
Cfa008583 Carpinus fangiana HOM05D000435 ORTHO05D007717 7.5e-13 77.4 83 56.6
AUR62014133 Chenopodium quinoa HOM05D000435 ORTHO05D007717 7.5e-13 77.4 84 56.0
Haze_11029 Corylus avellana HOM05D000435 ORTHO05D007717 7.5e-13 77.4 83 56.6
MD13G1027300 Malus domestica HOM05D000435 ORTHO05D007717 7.5e-13 77.4 59 72.9
SGA_v2.0_scaffold39G15150 Striga asiatica HOM05D000435 ORTHO05D007717 7.5e-13 77.4 57 71.9
AT2G01320 Arabidopsis thaliana HOM05D000435 ORTHO05D007717 9.8e-13 77.0 57 73.7
Duzib268G1320 Durio zibethinus HOM05D000435 ORTHO05D007717 9.8e-13 77.0 57 73.7
CANSAT01G1487 Cannabis sativa HOM05D000435 ORTHO05D007717 1.3e-12 76.6 57 71.9
Sabra10G0085100 Salix brachista HOM05D000435 ORTHO05D007717 1.3e-12 76.6 57 73.7
Ca_11094_v3 Cicer arietinum L. HOM05D000435 ORTHO05D007717 1.7e-12 76.3 70 62.9
Ciclev10014411m.g Citrus clementina HOM05D000435 ORTHO05D007717 1.7e-12 76.3 57 73.7
Dinv05148 Davidia involucrata HOM05D000435 ORTHO05D007717 1.7e-12 76.3 57 71.9
ECA234G2068 Erigeron canadensis HOM05D000435 ORTHO05D007717 1.7e-12 76.3 68 64.7
Hma1.2p1_2806F.1_g328830 Hydrangea macrophylla HOM05D000435 ORTHO05D007717 1.7e-12 76.3 57 71.9
Potri.010G115000 Populus trichocarpa HOM05D000435 ORTHO05D007717 1.7e-12 76.3 57 73.7
QL01p002136 Quercus lobata HOM05D000435 ORTHO05D007717 1.7e-12 76.3 57 71.9
CSS0010156 Camellia sinensis var. sinensis HOM05D000435 ORTHO05D007717 2.2e-12 75.9 54 74.1
unitig_62.g23730 Utricularia gibba HOM05D000435 ORTHO05D007717 2.2e-12 75.9 61 68.9
Dinv13004 Davidia involucrata HOM05D000435 ORTHO05D007717 3.7e-12 75.1 57 71.9
Thecc.02G278900 Theobroma cacao HOM05D000435 ORTHO05D007717 3.7e-12 75.1 57 71.9
Nitab4.5_0006134g0030 Nicotiana tabacum HOM05D000435 ORTHO05D007717 4.9e-12 74.7 64 62.5
PSO782G5050 Papaver somniferum HOM05D000435 ORTHO05D007717 4.9e-12 74.7 62 64.5
TWI79G1754 Tripterygium wilfordii HOM05D000435 ORTHO05D007717 4.9e-12 74.7 62 66.1
TAR371G0344 Trochodendron aralioides HOM05D000435 ORTHO05D007717 4.9e-12 74.7 57 70.2
CiPaw.06G013200 Carya illinoinensis HOM05D000435 ORTHO05D007717 6.4e-12 74.3 57 71.9
COL.COLO4_20458 Corchorus olitorius HOM05D000435 ORTHO05D007717 6.4e-12 74.3 54 74.1
HanXRQChr12g0377691 Helianthus annuus HOM05D000435 ORTHO05D007717 6.4e-12 74.3 65 64.6
Nn4g24088 Nelumbo nucifera HOM05D000435 ORTHO05D007717 6.4e-12 74.3 54 74.1
TAR622G0717 Trochodendron aralioides HOM05D000435 ORTHO05D007717 6.4e-12 74.3 54 74.1
THA.LOC104823881 Tarenaya hassleriana HOM05D000435 ORTHO05D007717 8.3e-12 73.9 55 72.7
EL10Ac6g14248 Beta vulgaris HOM05D000386 ORTHO05D007717 1.1e-11 73.6 84 54.8
Lsat_1_v5_gn_4_15380 Lactuca sativa HOM05D000435 ORTHO05D007717 1.1e-11 73.6 65 64.6
Sopen05g004180 Solanum pennellii HOM05D000435 ORTHO05D007717 1.1e-11 73.6 91 50.5
Cc11_g08910 Coffea canephora HOM05D000435 ORTHO05D007717 1.4e-11 73.2 57 68.4
Peaxi162Scf00205g00039 Petunia axillaris HOM05D000435 ORTHO05D007717 1.4e-11 73.2 64 62.5
PGR102G2223 Punica granatum HOM05D000435 ORTHO05D007717 1.4e-11 73.2 55 70.9
Solyc05g008350.3 Solanum lycopersicum HOM05D000435 ORTHO05D007717 1.4e-11 73.2 90 51.1
PGSC0003DMG400030507 Solanum tuberosum HOM05D000435 ORTHO05D007717 1.4e-11 73.2 91 49.5
DCAR_007282 Daucus carota HOM05D000435 ORTHO05D007717 1.9e-11 72.8 55 69.1
Aqoxy3G03969 Aquilegia oxysepala HOM05D000435 ORTHO05D007717 2.4e-11 72.4 54 72.2
CAN.G1693.15 Capsicum annuum HOM05D000435 ORTHO05D007717 2.4e-11 72.4 64 62.5
Gohir.A01G153500 Gossypium hirsutum HOM05D000435 ORTHO05D007717 3.2e-11 72.0 57 70.2
RcHm_v2.0_Chr4g0440941 Rosa chinensis HOM05D000435 ORTHO05D007717 3.2e-11 72.0 57 68.4
vmacro00422 Vaccinium macrocarpon HOM05D000435 ORTHO05D007717 3.2e-11 72.0 54 72.2
Gohir.D01G099900 Gossypium hirsutum HOM05D000435 ORTHO05D007717 4.1e-11 71.6 57 68.4
FvH4_4g32200 Fragaria vesca HOM05D000435 ORTHO05D007717 5.4e-11 71.2 57 70.2
FAN07G1046 Fragaria x ananassa HOM05D000435 ORTHO05D007717 5.4e-11 71.2 57 70.2
FAN12G3992 Fragaria x ananassa HOM05D000435 ORTHO05D007717 5.4e-11 71.2 57 70.2
FAN17G2296 Fragaria x ananassa HOM05D000435 ORTHO05D007717 5.4e-11 71.2 57 70.2
FAN22G2141 Fragaria x ananassa HOM05D000435 ORTHO05D007717 5.4e-11 71.2 57 70.2
Actinidia31981 Actinidia chinensis HOM05D000435 ORTHO05D007717 9.2e-11 70.5 54 70.4
ATR0326G016 Amborella trichopoda HOM05D000435 ORTHO05D007717 1.6e-10 69.7 62 62.9
HPP92_004829 Vanilla planifolia HOM05D000435 ORTHO05D007717 1.6e-10 69.7 54 68.5
Ah.03g138550 Amaranthus hybridus HOM05D000435 ORTHO05D007717 2.0e-10 69.3 84 52.4
Gorai.002G180700 Gossypium raimondii HOM05D000435 ORTHO05D007717 2.0e-10 69.3 57 66.7
MBI10_g07292_MAGBIO Magnolia biondii HOM05D000435 ORTHO05D007717 3.5e-10 68.6 84 50.0
Rhsim09G0067900 Rhododendron simsii HOM05D000435 ORTHO05D007717 7.8e-10 67.4 54 70.4
CDE06G1254 Ceratophyllum demersum HOM05D000435 ORTHO05D007717 1.3e-09 66.6 55 65.5
Zm00001eb334910 Zea mays HOM05D000435 ORTHO05D007717 3.0e-09 65.5 53 67.9
CDE07G1383 Ceratophyllum demersum HOM05D000435 ORTHO05D007717 5.0e-09 64.7 54 63.0
TPR.G36463 Trifolium pratense HOM05D000386 ORTHO05D010267 6.6e-09 64.3 61 62.3
SEGI_03439 Sequoiadendron giganteum HOM05D000435 ORTHO05D007717 1.1e-08 63.5 58 62.1
Os01g0121700 Oryza sativa ssp. japonica HOM05D000435 ORTHO05D007717 2.5e-08 62.4 53 64.2
SMO352G0065 Selaginella moellendorffii HOM05D000435 ORTHO05D007717 2.5e-08 62.4 54 66.7
MELO3C012302.2 Cucumis melo HOM05D000435 ORTHO05D007717 3.3e-08 62.0 48 70.8
AagrBONN_evm.TU.Sc2ySwM_344.3186 Anthoceros agrestis HOM05D000435 ORTHO05D007717 4.7e-07 58.2 92 43.5
Pp3c14_1930 Physcomitrium patens HOM05D000435 ORTHO05D007717 6.2e-07 57.8 54 59.3
Nitab4.5_0007384g0020 Nicotiana tabacum HOM05D000435 ORTHO05D007717 1.8e-06 56.2 47 63.8
Mapoly0142s0030 Marchantia polymorpha HOM05D000435 ORTHO05D007717 6.8e-06 54.3 51 58.8


User provided reference genes

Program Settings