Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g066530 Medicago truncatula HOM05D005276 ORTHO05D006813 1.8e-130 469.2 223 100.0
Ca_03455_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 2.7e-65 252.7 223 55.6
Medtr6g073540 Medicago truncatula HOM05D005276 ORTHO05D006813 1.2e-60 237.3 225 52.0
Psat0s971g0080 Pisum sativum HOM05D005276 ORTHO05D006813 3.4e-60 235.7 229 51.1
Medtr6g072470 Medicago truncatula HOM05D005276 ORTHO05D006813 4.0e-53 212.2 195 53.3
Medtr0695s0030 Medicago truncatula HOM05D005276 ORTHO05D006813 4.4e-52 208.8 220 45.9
Medtr6g048620 Medicago truncatula HOM05D005276 ORTHO05D006813 2.2e-51 206.5 222 48.2
Medtr8g038070 Medicago truncatula HOM05D005276 ORTHO05D006813 2.9e-51 206.1 220 45.5
TPR.G33522 Trifolium pratense HOM05D005276 ORTHO05D006813 2.9e-51 206.1 225 47.1
Medtr8g038100 Medicago truncatula HOM05D005276 ORTHO05D006813 1.1e-50 204.1 220 45.0
Medtr6g045077 Medicago truncatula HOM05D005276 ORTHO05D006813 1.9e-50 203.4 218 45.4
Medtr6g048910 Medicago truncatula HOM05D005276 ORTHO05D006813 2.1e-49 199.9 220 45.5
TPR.G33545 Trifolium pratense HOM05D005276 ORTHO05D006813 6.0e-49 198.4 218 45.0
Ca_08210_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 1.3e-48 197.2 224 46.9
VMungo0720G1899 Vigna mungo HOM05D005276 ORTHO05D006813 2.5e-47 193.0 219 46.1
Rhsim04G0073100 Rhododendron simsii HOM05D005276 ORTHO05D006813 7.3e-47 191.4 225 44.0
Phvul.007G276000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.2e-46 190.7 221 47.1
VMungo0720G2128 Vigna mungo HOM05D005276 ORTHO05D006813 2.1e-46 189.9 220 46.8
Medtr6g048810 Medicago truncatula HOM05D005276 ORTHO05D006813 3.6e-46 189.1 298 36.6
Psat0s1021g0280 Pisum sativum HOM05D005276 ORTHO05D006813 4.7e-46 188.7 224 44.6
Psat0s876g0120 Pisum sativum HOM05D005276 ORTHO05D006813 1.1e-45 187.6 222 44.6
TPR.G33532 Trifolium pratense HOM05D005276 ORTHO05D006813 1.8e-45 186.8 223 43.0
Phvul.007G276500 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.3e-45 186.4 221 46.6
TWI23G0671 Tripterygium wilfordii HOM05D005276 ORTHO05D006813 3.1e-45 186.0 220 44.1
VMungo0720G3131 Vigna mungo HOM05D005276 ORTHO05D006813 3.1e-45 186.0 220 45.0
Medtr0057s0100 Medicago truncatula HOM05D005276 ORTHO05D006813 4.0e-45 185.7 223 41.7
Phvul.007G275900 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 5.2e-45 185.3 220 45.0
VMungo0720G2700 Vigna mungo HOM05D005276 ORTHO05D006813 5.2e-45 185.3 223 44.4
Rhsim05G0197900 Rhododendron simsii HOM05D005276 ORTHO05D006813 8.9e-45 184.5 222 44.1
Psat0s876g0040 Pisum sativum HOM05D005276 ORTHO05D006813 1.2e-44 184.1 222 43.7
Hma1.2p1_0052F.1_g030780 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 2.6e-44 183.0 226 43.4
Hma1.2p1_0472F.1_g160005 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 2.6e-44 183.0 226 43.4
Rhsim04G0116800 Rhododendron simsii HOM05D005276 ORTHO05D006813 2.6e-44 183.0 221 42.1
Medtr0057s0170 Medicago truncatula HOM05D005276 ORTHO05D006813 3.4e-44 182.6 223 41.7
Psat5g117800 Pisum sativum HOM05D005276 ORTHO05D006813 3.4e-44 182.6 220 45.5
Psat5g117840 Pisum sativum HOM05D005276 ORTHO05D006813 3.4e-44 182.6 220 45.5
Actinidia07622 Actinidia chinensis HOM05D005276 ORTHO05D006813 4.4e-44 182.2 221 43.4
Hma1.2p1_0472F.1_g160020 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 4.4e-44 182.2 226 43.4
Phvul.007G277100 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 4.4e-44 182.2 221 46.2
Rhsim05G0142600 Rhododendron simsii HOM05D005276 ORTHO05D006813 4.4e-44 182.2 223 43.5
Rhsim08G0006900 Rhododendron simsii HOM05D005276 ORTHO05D006813 5.8e-44 181.8 221 42.1
Phvul.008G252000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 7.6e-44 181.4 220 44.5
PGR031G1219 Punica granatum HOM05D005276 ORTHO05D006813 7.6e-44 181.4 219 43.4
Hma1.2p1_0370F.1_g137770 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 9.9e-44 181.0 226 43.8
Phvul.007G276200 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 9.9e-44 181.0 220 45.0
Psat0s3494g0040 Pisum sativum HOM05D005276 ORTHO05D006813 1.3e-43 180.6 220 43.6
Psat1g110680 Pisum sativum HOM05D005276 ORTHO05D006813 1.3e-43 180.6 220 43.6
vmacro22834 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 2.2e-43 179.9 222 43.2
Phvul.007G276100 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 3.8e-43 179.1 221 43.4
TPR.G10459 Trifolium pratense HOM05D005276 ORTHO05D006813 4.9e-43 178.7 224 40.2
Phvul.007G275800 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 6.4e-43 178.3 223 44.8
Phvul.009G133400 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 8.4e-43 177.9 219 44.7
Rhsim04G0165600 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.1e-42 177.6 220 43.2
Medtr7g103990 Medicago truncatula HOM05D005276 ORTHO05D006813 7.1e-42 174.9 226 41.6
Ca_23693_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 3.5e-41 172.6 268 38.8
Phvul.007G277000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 3.5e-41 172.6 203 45.3
Hma1.2p1_0472F.1_g159990 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 4.6e-41 172.2 210 44.3
Phvul.007G275700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 5.1e-40 168.7 203 44.8
EL10Ac3g05487 Beta vulgaris HOM05D005276 ORTHO05D006813 8.6e-40 167.9 229 40.2
Phvul.007G276300 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.5e-39 166.4 220 41.8
PGR102G1949 Punica granatum HOM05D005276 ORTHO05D006813 2.5e-39 166.4 229 40.6
PGR102G3141 Punica granatum HOM05D005276 ORTHO05D006813 7.3e-39 164.9 225 43.1
AUR62014887 Chenopodium quinoa HOM05D005276 ORTHO05D006813 2.8e-38 162.9 230 40.4
RcHm_v2.0_Chr5g0076681 Rosa chinensis HOM05D005276 ORTHO05D006813 4.7e-38 162.2 223 40.4
Medtr0807s0020 Medicago truncatula HOM05D005276 ORTHO05D006813 1.8e-37 160.2 224 37.9
Medtr6g040290 Medicago truncatula HOM05D005276 ORTHO05D006813 4.0e-37 159.1 226 39.8
Medtr0216s0030 Medicago truncatula HOM05D005276 ORTHO05D006813 5.8e-36 155.2 197 41.1
PGR102G1815 Punica granatum HOM05D005276 ORTHO05D006813 1.3e-35 154.1 230 39.1
Ah.02g117180 Amaranthus hybridus HOM05D005276 ORTHO05D006813 3.8e-35 152.5 229 39.3
EL10Ac1g01354 Beta vulgaris HOM05D005276 ORTHO05D006813 8.4e-35 151.4 223 38.1
EL10Ac1g01356 Beta vulgaris HOM05D005276 ORTHO05D006813 8.4e-35 151.4 223 38.1
EL10Ac1g01358 Beta vulgaris HOM05D005276 ORTHO05D006813 8.4e-35 151.4 223 38.1
Phvul.007G275600 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 3.2e-34 149.4 221 40.7
TPR.G28516 Trifolium pratense HOM05D005276 ORTHO05D006813 5.4e-34 148.7 134 54.5
VMungo0720G1439 Vigna mungo HOM05D005276 ORTHO05D006813 1.2e-33 147.5 218 39.9
AUR62016119 Chenopodium quinoa HOM05D005276 ORTHO05D006813 3.5e-33 146.0 223 39.5
Phvul.007G263500 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 6.0e-33 145.2 224 39.3
Hma1.2p1_2291F.1_g319080 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 2.3e-32 143.3 205 40.0
EL10Ac1g01352 Beta vulgaris HOM05D005276 ORTHO05D006813 3.3e-31 139.4 230 36.5
Ah.10g029400 Amaranthus hybridus HOM05D005276 ORTHO05D006813 3.6e-30 136.0 195 40.5
Medtr6g048880 Medicago truncatula HOM05D005276 ORTHO05D006813 3.6e-30 136.0 177 38.4
EL10Ac2g04799 Beta vulgaris HOM05D005276 ORTHO05D006813 4.8e-30 135.6 199 40.7
Ah.02g121010 Amaranthus hybridus HOM05D005276 ORTHO05D006813 3.1e-29 132.9 202 40.6
Lj3g0023477 Lotus japonicus HOM05D005276 ORTHO05D006813 1.2e-28 131.0 120 52.5
AUR62041391 Chenopodium quinoa HOM05D005276 ORTHO05D006813 7.6e-28 128.3 223 38.1
EL10Ac2g04798 Beta vulgaris HOM05D005276 ORTHO05D006813 1.3e-27 127.5 204 37.7
vmacro00373 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 2.2e-27 126.7 161 42.9
EL10Ac4g09362 Beta vulgaris HOM05D005276 ORTHO05D006813 8.4e-27 124.8 196 39.8
CSS0029999 Camellia sinensis var. sinensis HOM05D005276 ORTHO05D006813 1.9e-26 123.6 147 42.2
Phvul.007G263700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.9e-26 123.6 198 36.9
Os04g0213100 Oryza sativa ssp. japonica HOM05D005276 ORTHO05D006813 3.2e-26 122.9 229 33.6
Phvul.007G276401 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 7.1e-26 121.7 130 50.8
EL10Ac1g02109 Beta vulgaris HOM05D005276 ORTHO05D006813 2.7e-25 119.8 227 33.9
Hma1.2p1_0052F.1_g030770 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 2.7e-25 119.8 224 33.5
Hma1.2p1_0472F.1_g160029 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 2.7e-25 119.8 224 33.5
EL10Ac1g02090 Beta vulgaris HOM05D005276 ORTHO05D006813 6.7e-24 115.2 227 33.0
PGR102G2116 Punica granatum HOM05D005276 ORTHO05D006813 1.9e-23 113.6 214 33.6
Rhsim05G0197600 Rhododendron simsii HOM05D005276 ORTHO05D006813 2.5e-23 113.2 219 32.0
Medtr7g012000 Medicago truncatula HOM05D005276 ORTHO05D006813 9.6e-23 111.3 195 35.4
AUR62014758 Chenopodium quinoa HOM05D005276 ORTHO05D006813 1.3e-22 110.9 145 41.4
CSS0004680 Camellia sinensis var. sinensis HOM05D005276 ORTHO05D006813 2.1e-22 110.2 143 39.9
EL10Ac1g02097 Beta vulgaris HOM05D005276 ORTHO05D006813 2.4e-21 106.7 191 36.1
VMungo0720G2085 Vigna mungo HOM05D005276 ORTHO05D006813 4.0e-21 105.9 139 43.2
Medtr6g049040 Medicago truncatula HOM05D005276 ORTHO05D006813 9.0e-21 104.8 187 33.2
EL10Ac1g01353 Beta vulgaris HOM05D005276 ORTHO05D006813 1.5e-20 104.0 240 30.0
Phvul.007G276700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.5e-20 104.0 113 49.6
Phvul.002G269700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 3.8e-19 99.4 122 45.9
Dinv42431 Davidia involucrata HOM05D005276 ORTHO05D006813 6.4e-19 98.6 184 34.2
Rhsim10G0134200 Rhododendron simsii HOM05D005276 ORTHO05D006813 8.4e-19 98.2 192 33.9
RcHm_v2.0_Chr5g0076491 Rosa chinensis HOM05D005276 ORTHO05D006813 1.4e-18 97.4 135 38.5
Medtr4g102470 Medicago truncatula HOM05D005276 ORTHO05D006813 3.2e-18 96.3 179 34.6
Psat1g051400 Pisum sativum HOM05D005276 ORTHO05D006813 4.2e-18 95.9 86 52.3
Ah.16g101350 Amaranthus hybridus HOM05D005276 ORTHO05D038198 1.6e-17 94.0 238 33.2
EL10Ac1g01355 Beta vulgaris HOM05D005276 ORTHO05D006813 2.7e-17 93.2 133 39.1
EL10Ac1g01357 Beta vulgaris HOM05D005276 ORTHO05D006813 2.7e-17 93.2 133 39.1
Lj6C375G5 Lonicera japonica HOM05D005276 ORTHO05D001431 3.5e-17 92.8 165 37.0
AUR62024089 Chenopodium quinoa HOM05D005276 ORTHO05D006813 4.6e-17 92.4 212 32.1
RcHm_v2.0_Chr5g0076401 Rosa chinensis HOM05D005276 ORTHO05D006813 2.5e-15 86.7 119 40.3
vmacro13228 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 9.6e-15 84.7 146 37.7
TPR.G33490 Trifolium pratense HOM05D005276 ORTHO05D006813 3.7e-14 82.8 77 53.2
TPR.G33511 Trifolium pratense HOM05D005276 ORTHO05D006813 3.7e-14 82.8 78 53.8
AUR62037739 Chenopodium quinoa HOM05D005276 ORTHO05D038198 6.2e-14 82.0 206 32.0
RcHm_v2.0_Chr5g0076801 Rosa chinensis HOM05D005276 ORTHO05D006813 1.4e-13 80.9 124 39.5
TPR.G40462 Trifolium pratense HOM05D005276 ORTHO05D006813 9.0e-13 78.2 105 37.1
Phvul.007G252000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 3.4e-12 76.3 111 38.7
Phvul.002G268600 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 7.6e-12 75.1 138 37.7
Lj6C426G9 Lonicera japonica HOM05D005276 ORTHO05D006813 1.0e-08 64.7 106 34.9
AUR62016935 Chenopodium quinoa HOM05D005276 ORTHO05D006813 3.9e-08 62.8 74 45.9
RcHm_v2.0_Chr5g0076341 Rosa chinensis HOM05D005276 ORTHO05D006813 3.9e-08 62.8 92 38.0
Phvul.007G264000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.6e-06 57.4 120 30.8
EL10Ac1g02098 Beta vulgaris HOM05D005276 ORTHO05D006813 4.8e-06 55.8 83 39.8
RcHm_v2.0_Chr5g0076541 Rosa chinensis HOM05D005276 ORTHO05D006813 8.2e-06 55.1 65 47.7


User provided reference genes

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