Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g064700 Medicago truncatula HOM05D003216 ORTHO05D002268 3.1e-110 401.7 192 100.0
Medtr4g132765 Medicago truncatula HOM05D003216 ORTHO05D002268 3.4e-85 318.5 167 89.8
Medtr6g035400 Medicago truncatula HOM05D003216 ORTHO05D002268 3.2e-83 312.0 167 86.8
Medtr8g017510 Medicago truncatula HOM05D003216 ORTHO05D002268 2.1e-82 309.3 167 88.6
Medtr6g084230 Medicago truncatula HOM05D003216 ORTHO05D002268 4.8e-79 298.1 161 87.0
Medtr3g087410 Medicago truncatula HOM05D003216 ORTHO05D002268 4.2e-67 258.5 167 77.8
Medtr7g056013 Medicago truncatula HOM05D003216 ORTHO05D002268 5.1e-65 251.5 167 74.9
Medtr7g004990 Medicago truncatula HOM05D003216 ORTHO05D002268 4.3e-64 248.4 141 85.8
Medtr2g061890 Medicago truncatula HOM05D003216 ORTHO05D002268 7.4e-64 247.7 168 70.8
Medtr7g095760 Medicago truncatula HOM05D003216 ORTHO05D002268 1.9e-56 223.0 156 70.5
Medtr8g468040 Medicago truncatula HOM05D003216 ORTHO05D002268 2.2e-47 193.0 168 60.1
Medtr5g039360 Medicago truncatula HOM05D003216 ORTHO05D002268 7.4e-40 167.9 106 75.5
Medtr3g014480 Medicago truncatula HOM05D003216 ORTHO05D002268 7.2e-35 151.4 157 51.0
Medtr3g032550 Medicago truncatula HOM05D003216 ORTHO05D002268 7.2e-35 151.4 169 48.5
Medtr0700s0010 Medicago truncatula HOM05D003216 ORTHO05D002268 2.3e-33 146.4 84 83.3
Medtr8g040220 Medicago truncatula HOM05D003216 ORTHO05D002268 4.4e-32 142.1 172 45.3
Medtr1g051465 Medicago truncatula HOM05D003216 ORTHO05D002268 1.1e-30 137.5 170 45.3
Medtr4g066180 Medicago truncatula HOM05D003216 ORTHO05D002268 2.4e-30 136.3 73 87.7
Medtr5g018790 Medicago truncatula HOM05D003216 ORTHO05D002268 7.0e-30 134.8 170 44.7
Medtr7g029645 Medicago truncatula HOM05D003216 ORTHO05D002268 9.1e-30 134.4 170 44.7
TPR.G28459 Trifolium pratense HOM05D003216 ORTHO05D002268 1.6e-29 133.7 127 49.6
Medtr4g065057 Medicago truncatula HOM05D003216 ORTHO05D002268 2.0e-29 133.3 169 43.8
Medtr5g062340 Medicago truncatula HOM05D003216 ORTHO05D002268 2.7e-29 132.9 170 42.9
Medtr7g006230 Medicago truncatula HOM05D003216 ORTHO05D002268 2.7e-29 132.9 170 44.7
TPR.G40729 Trifolium pratense HOM05D003216 ORTHO05D002268 4.5e-29 132.1 129 50.4
Medtr8g020437 Medicago truncatula HOM05D003216 ORTHO05D002268 1.7e-28 130.2 170 43.5
Medtr1g035110 Medicago truncatula HOM05D003216 ORTHO05D002268 3.8e-28 129.0 170 43.5
Medtr4g113170 Medicago truncatula HOM05D003216 ORTHO05D002268 3.8e-28 129.0 123 48.8
TPR.G27562 Trifolium pratense HOM05D003216 ORTHO05D002268 3.2e-27 125.9 114 52.6
Medtr6g084295 Medicago truncatula HOM05D003216 ORTHO05D002268 9.4e-27 124.4 69 84.1
TPR.G17632 Trifolium pratense HOM05D003216 ORTHO05D002268 2.1e-26 123.2 114 52.6
Medtr1g016820 Medicago truncatula HOM05D003216 ORTHO05D002268 2.7e-26 122.9 170 43.5
Medtr3g437080 Medicago truncatula HOM05D003216 ORTHO05D002268 3.6e-26 122.5 105 52.4
TPR.G32043 Trifolium pratense HOM05D003216 ORTHO05D002268 1.0e-25 120.9 114 51.8
Medtr8g446690 Medicago truncatula HOM05D003216 ORTHO05D002268 1.8e-25 120.2 142 43.7
TPR.G16425 Trifolium pratense HOM05D003216 ORTHO05D002268 2.3e-25 119.8 114 51.8
Medtr3g044770 Medicago truncatula HOM05D003216 ORTHO05D002268 3.0e-25 119.4 71 74.6
Medtr5g071805 Medicago truncatula HOM05D003216 ORTHO05D004526 1.2e-24 117.5 68 85.3
Medtr1g101180 Medicago truncatula HOM05D003216 ORTHO05D002268 2.6e-24 116.3 157 42.0
Medtr2g461120 Medicago truncatula HOM05D003216 ORTHO05D002268 3.4e-24 115.9 146 43.2
Medtr5g037560 Medicago truncatula HOM05D003216 ORTHO05D002268 1.7e-23 113.6 108 49.1
Medtr2g096070 Medicago truncatula HOM05D003216 ORTHO05D002268 4.8e-23 112.1 170 41.2
Medtr2g436740 Medicago truncatula HOM05D003216 ORTHO05D002268 8.3e-23 111.3 81 66.7
Medtr8g463980 Medicago truncatula HOM05D003216 ORTHO05D002268 1.8e-22 110.2 169 39.1
TPR.G28022 Trifolium pratense HOM05D003216 ORTHO05D002268 1.8e-22 110.2 137 43.1
Medtr5g006100 Medicago truncatula HOM05D003216 ORTHO05D004526 2.4e-22 109.8 62 82.3
Medtr7g024793 Medicago truncatula HOM05D003216 ORTHO05D002268 4.1e-22 109.0 103 49.5
TPR.G14425 Trifolium pratense HOM05D003216 ORTHO05D002268 7.0e-22 108.2 148 41.2
TPR.G31202 Trifolium pratense HOM05D009380 ORTHO05D009933 1.2e-21 107.5 121 45.5
TPR.G36380 Trifolium pratense HOM05D003216 ORTHO05D002268 2.7e-21 106.3 117 45.3
Medtr8g409330 Medicago truncatula HOM05D003216 ORTHO05D002268 3.5e-21 105.9 165 40.0
TPR.G754 Trifolium pratense HOM05D003216 ORTHO05D002268 3.5e-21 105.9 88 54.5
TPR.G7282 Trifolium pratense HOM05D003216 ORTHO05D002268 4.5e-21 105.5 86 54.7
TPR.G35306 Trifolium pratense HOM05D003216 ORTHO05D002268 1.0e-20 104.4 134 41.8
TPR.G20309 Trifolium pratense HOM05D003216 ORTHO05D002268 1.7e-20 103.6 135 42.2
TPR.G24036 Trifolium pratense HOM05D000096 ORTHO05D009933 1.7e-20 103.6 114 44.7
TPR.G40026 Trifolium pratense HOM05D003216 ORTHO05D002268 2.9e-20 102.8 95 48.4
TPR.G22805 Trifolium pratense HOM05D003216 ORTHO05D002268 6.6e-20 101.7 107 45.8
Medtr5g015710 Medicago truncatula HOM05D007688 ORTHO05D004526 1.5e-19 100.5 53 92.5
TPR.G8192 Trifolium pratense HOM05D003216 ORTHO05D002268 1.5e-19 100.5 132 39.4
Medtr7g069450 Medicago truncatula HOM05D003216 ORTHO05D002268 1.9e-19 100.1 114 45.6
TPR.G14065 Trifolium pratense HOM05D003216 ORTHO05D002268 3.3e-19 99.4 129 38.8
TPR.G20359 Trifolium pratense HOM05D003216 ORTHO05D002268 3.3e-19 99.4 130 38.5
TPR.G9575 Trifolium pratense HOM05D003216 ORTHO05D009933 3.3e-19 99.4 138 38.4
TPR.G22718 Trifolium pratense HOM05D003216 ORTHO05D002268 4.2e-19 99.0 137 40.9
TPR.G17160 Trifolium pratense HOM05D003216 ORTHO05D002268 7.2e-19 98.2 130 37.7
TPR.G22845 Trifolium pratense HOM05D003216 ORTHO05D002268 9.5e-19 97.8 136 35.3
TPR.G8656 Trifolium pratense HOM05D003216 ORTHO05D002268 2.8e-18 96.3 138 35.5
Medtr2g067680 Medicago truncatula HOM05D003216 ORTHO05D002268 6.1e-18 95.1 131 45.0
TPR.G40558 Trifolium pratense HOM05D003216 ORTHO05D002268 1.0e-17 94.4 130 36.9
TPR.G25329 Trifolium pratense HOM05D009380 ORTHO05D009933 4.0e-17 92.4 110 42.7
TPR.G38871 Trifolium pratense HOM05D003216 ORTHO05D002268 8.9e-17 91.3 124 39.5
Medtr2g101530 Medicago truncatula HOM05D003216 ORTHO05D002268 7.5e-16 88.2 101 47.5
TPR.G31505 Trifolium pratense HOM05D003216 ORTHO05D002268 7.5e-16 88.2 132 36.4
Medtr0325s0020 Medicago truncatula HOM05D003444 ORTHO05D003963 8.3e-15 84.7 88 45.5
Medtr4g015450 Medicago truncatula HOM05D003216 ORTHO05D010126 1.1e-14 84.3 69 53.6
Medtr4g048540 Medicago truncatula HOM05D003216 ORTHO05D002268 1.1e-14 84.3 106 42.5
TPR.G38697 Trifolium pratense HOM05D003216 ORTHO05D002268 9.2e-14 81.3 60 55.0
Medtr6g086765 Medicago truncatula HOM05D003216 ORTHO05D002268 5.9e-13 78.6 132 34.8
Medtr2g461930 Medicago truncatula HOM05D003216 ORTHO05D002268 7.8e-13 78.2 125 38.4
Medtr2g451140 Medicago truncatula HOM05D003216 ORTHO05D002268 1.3e-12 77.4 47 76.6
TPR.G14047 Trifolium pratense HOM05D003216 ORTHO05D002268 2.3e-12 76.6 103 37.9
Medtr3g075060 Medicago truncatula HOM05D007688 ORTHO05D004526 6.6e-12 75.1 49 77.6
Ca_05375_v3 Cicer arietinum L. HOM05D003216 ORTHO05D002268 1.9e-11 73.6 112 36.6
Medtr2g067910 Medicago truncatula HOM05D003216 ORTHO05D002268 1.9e-11 73.6 100 42.0
Medtr5g413325 Medicago truncatula HOM05D003216 ORTHO05D002268 1.6e-10 70.5 169 30.8
Medtr2g026620 Medicago truncatula HOM05D003216 ORTHO05D002268 2.1e-10 70.1 165 31.5
TPR.G17165 Trifolium pratense HOM05D003216 ORTHO05D002268 2.8e-10 69.7 127 30.7
Medtr1g024975 Medicago truncatula HOM05D003216 ORTHO05D002268 3.6e-10 69.3 95 43.2
Phvul.008G000100 Phaseolus vulgaris HOM05D000593 ORTHO05D000562 3.6e-10 69.3 110 35.5
TWI75G1234 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 3.6e-10 69.3 105 32.4
TPR.G14233 Trifolium pratense HOM05D000096 ORTHO05D000045 6.1e-10 68.6 78 44.9
Medtr5g032220 Medicago truncatula HOM05D000593 ORTHO05D000562 1.0e-09 67.8 110 31.8
TPR.G30425 Trifolium pratense HOM05D003216 ORTHO05D002268 1.8e-09 67.0 69 50.7
TPR.G30694 Trifolium pratense HOM05D003216 ORTHO05D002268 1.8e-09 67.0 67 46.3
Medtr2g034775 Medicago truncatula HOM05D003216 ORTHO05D002268 2.3e-09 66.6 62 48.4
TWI38G0345 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 2.3e-09 66.6 154 29.9
CANSAT64G1746 Cannabis sativa HOM05D000593 ORTHO05D002268 3.1e-09 66.2 130 33.1
CANSAT64G1841 Cannabis sativa HOM05D000593 ORTHO05D002268 3.1e-09 66.2 130 33.1
Medtr3g088695 Medicago truncatula HOM05D003216 ORTHO05D002268 4.0e-09 65.9 55 56.4
TWI14G0423 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 5.2e-09 65.5 102 33.3
Medtr8g463970 Medicago truncatula HOM05D003216 ORTHO05D002268 6.8e-09 65.1 61 50.8
Medtr3g072200 Medicago truncatula HOM05D003216 ORTHO05D002268 8.9e-09 64.7 55 54.5
HanXRQChr08g0232231 Helianthus annuus HOM05D000593 ORTHO05D000562 1.5e-08 63.9 108 36.1
HanXRQChr13g0412791 Helianthus annuus HOM05D000593 ORTHO05D000562 1.5e-08 63.9 108 36.1
HanXRQChr15g0467831 Helianthus annuus HOM05D000593 ORTHO05D000562 1.5e-08 63.9 108 36.1
TPR.G17604 Trifolium pratense HOM05D003216 ORTHO05D002268 1.5e-08 63.9 58 53.4
Medtr4g050580 Medicago truncatula HOM05D003216 ORTHO05D002268 2.0e-08 63.5 51 54.9
TPR.G40224 Trifolium pratense HOM05D003216 ORTHO05D002268 2.0e-08 63.5 118 33.1
CANSAT54G0060 Cannabis sativa HOM05D003216 ORTHO05D002268 2.6e-08 63.2 125 33.6
Ca_13826_v3 Cicer arietinum L. HOM05D000593 ORTHO05D004526 2.6e-08 63.2 97 38.1
Medtr5g017770 Medicago truncatula HOM05D003216 ORTHO05D002268 2.6e-08 63.2 54 53.7
Ca_10000_v3 Cicer arietinum L. HOM05D000009 ORTHO05D000008 4.4e-08 62.4 99 36.4
Medtr5g071980 Medicago truncatula HOM05D003216 ORTHO05D002268 4.4e-08 62.4 42 61.9
Medtr4g124655 Medicago truncatula HOM05D003216 ORTHO05D002268 9.8e-08 61.2 82 43.9
Medtr0116s0070 Medicago truncatula HOM05D003216 ORTHO05D002268 1.7e-07 60.5 75 42.7
Medtr4g033145 Medicago truncatula HOM05D003216 ORTHO05D002268 1.7e-07 60.5 82 45.1
Lj6A78T35 Lonicera japonica HOM05D000011 ORTHO05D002639 2.2e-07 60.1 108 31.5
Medtr6g089230 Medicago truncatula HOM05D003216 ORTHO05D004526 2.2e-07 60.1 56 46.4
TWI56G1292 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 2.2e-07 60.1 113 31.0
FvH4_5g20623 Fragaria vesca HOM05D000593 ORTHO05D000562 2.9e-07 59.7 140 32.9
Medtr3g463860 Medicago truncatula HOM05D003216 ORTHO05D002268 2.9e-07 59.7 112 31.2
Medtr8g445710 Medicago truncatula HOM05D003216 ORTHO05D002268 2.9e-07 59.7 55 50.9
TWI38G0080 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 3.7e-07 59.3 108 28.7
Aqoxy3G00378 Aquilegia oxysepala HOM05D003216 ORTHO05D002268 4.9e-07 58.9 110 34.5
TWI73G0339 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 4.9e-07 58.9 112 32.1
Medtr0794s0010 Medicago truncatula HOM05D003216 ORTHO05D002268 8.3e-07 58.2 82 43.9
Medtr1g015680 Medicago truncatula HOM05D003216 ORTHO05D002268 8.3e-07 58.2 169 28.4
Medtr4g088830 Medicago truncatula HOM05D003216 ORTHO05D002268 8.3e-07 58.2 77 45.5
Medtr8g465330 Medicago truncatula HOM05D003216 ORTHO05D002268 8.3e-07 58.2 155 29.0
Actinidia22184 Actinidia chinensis HOM05D000455 ORTHO05D000434 1.1e-06 57.8 112 33.0
ECA247G1059 Erigeron canadensis HOM05D000593 ORTHO05D002268 1.1e-06 57.8 111 29.7
Medtr5g028280 Medicago truncatula HOM05D003216 ORTHO05D002268 1.1e-06 57.8 42 59.5
Medtr3g005107 Medicago truncatula HOM05D003216 ORTHO05D002268 1.4e-06 57.4 80 42.5
Rhsim01G0176400 Rhododendron simsii HOM05D003216 ORTHO05D002268 1.9e-06 57.0 110 29.1
Rhsim06G0090900 Rhododendron simsii HOM05D003216 ORTHO05D002268 1.9e-06 57.0 110 29.1
ECA246G0789 Erigeron canadensis HOM05D004279 ORTHO05D004979 3.2e-06 56.2 133 29.3
CSS0006571 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 5.4e-06 55.5 106 29.2
ECA240G3759 Erigeron canadensis HOM05D000593 ORTHO05D002268 5.4e-06 55.5 106 33.0
Medtr1g089160 Medicago truncatula HOM05D003216 ORTHO05D002268 5.4e-06 55.5 47 53.2
Medtr3g022185 Medicago truncatula HOM05D003216 ORTHO05D002268 5.4e-06 55.5 143 30.8
Atru.chr11.19 Acer truncatum HOM05D000593 ORTHO05D000562 7.0e-06 55.1 113 33.6
Atru.chr11.22 Acer truncatum HOM05D000593 ORTHO05D000562 7.0e-06 55.1 113 33.6
CSS0033855 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 7.0e-06 55.1 106 29.2
MD08G1164400 Malus domestica HOM05D000593 ORTHO05D000562 7.0e-06 55.1 114 28.9


User provided reference genes

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