Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g064150 Medicago truncatula HOM05D010072 ORTHO05D011797 6.4e-196 687.2 339 100.0
Medtr1g064380 Medicago truncatula HOM05D010072 ORTHO05D011797 3.8e-71 272.7 308 51.6
Medtr1g064170 Medicago truncatula HOM05D010072 ORTHO05D011797 1.5e-67 260.8 350 44.9
Medtr1g021250 Medicago truncatula HOM05D010072 ORTHO05D011797 5.3e-65 252.3 376 43.6
Medtr1g105580 Medicago truncatula HOM05D010072 ORTHO05D011797 8.5e-63 245.0 364 45.3
Medtr1g054655 Medicago truncatula HOM05D010072 ORTHO05D011797 2.4e-57 226.9 345 44.3
Medtr3g104020 Medicago truncatula HOM05D010072 ORTHO05D011797 1.6e-53 214.2 299 45.8
Medtr1g039290 Medicago truncatula HOM05D010072 ORTHO05D011797 8.5e-47 191.8 189 58.2
Medtr1g008030 Medicago truncatula HOM05D010072 ORTHO05D011797 1.3e-39 167.9 241 45.2
Medtr1g034440 Medicago truncatula HOM05D010072 ORTHO05D011797 4.8e-34 149.4 400 32.8
Medtr6g004700 Medicago truncatula HOM05D010072 ORTHO05D011797 4.7e-29 132.9 339 36.3
Medtr1g008010 Medicago truncatula HOM05D010072 ORTHO05D011797 1.1e-25 121.7 192 41.7
Medtr1g034420 Medicago truncatula HOM05D010072 ORTHO05D011797 7.0e-25 119.0 308 34.4
Medtr5g008255 Medicago truncatula HOM05D010072 ORTHO05D011797 1.4e-20 104.8 277 31.4
Medtr1g011810 Medicago truncatula HOM05D010072 ORTHO05D011797 6.3e-18 95.9 96 54.2
ECA240G4803 Erigeron canadensis HOM05D000017 ORTHO05D000013 7.3e-14 82.4 313 25.9
Medtr2g025440 Medicago truncatula HOM05D010072 ORTHO05D000017 9.5e-14 82.0 82 57.3
ECA240G1124 Erigeron canadensis HOM05D005398 ORTHO05D000476 1.6e-13 81.3 299 27.1
ECA240G3448 Erigeron canadensis HOM05D000162 ORTHO05D000090 1.8e-12 77.8 239 23.8
ECA240G1752 Erigeron canadensis HOM05D000162 ORTHO05D000090 5.2e-12 76.3 235 27.7
Ca_31091_v3 Cicer arietinum L. HOM05D008100 ORTHO05D009715 6.8e-12 75.9 97 46.4
ECA240G0231 Erigeron canadensis HOM05D000162 ORTHO05D000090 2.0e-11 74.3 277 27.8
ECA240G3374 Erigeron canadensis HOM05D000102 ORTHO05D000090 3.4e-11 73.6 289 28.0
CDE07G0106 Ceratophyllum demersum HOM05D005973 ORTHO05D007285 7.5e-11 72.4 246 26.8
Prupe.2G027000 Prunus persica HOM05D005973 ORTHO05D007285 2.2e-10 70.9 245 25.7
Manes.05G118900 Manihot esculenta HOM05D005973 ORTHO05D007285 3.7e-10 70.1 241 27.8
Glyma.07G102000 Glycine max HOM05D010072 ORTHO05D011797 6.4e-10 69.3 95 42.1
MD07G1026900 Malus domestica HOM05D005973 ORTHO05D007285 8.3e-10 68.9 240 27.1
arahy.Tifrunner.gnm1.ann1.947KSG Arachis hypogaea HOM05D000162 ORTHO05D000090 1.1e-09 68.6 133 36.8
PGR031G1457 Punica granatum HOM05D005973 ORTHO05D007285 1.1e-09 68.6 243 25.9
QL05p089319 Quercus lobata HOM05D005973 ORTHO05D007285 1.1e-09 68.6 246 26.0
AUR62037245 Chenopodium quinoa HOM05D005973 ORTHO05D007285 1.9e-09 67.8 255 26.3
AUR62026807 Chenopodium quinoa HOM05D005973 ORTHO05D007285 3.2e-09 67.0 255 25.9
Medtr2g037815 Medicago truncatula HOM05D054157 ORTHO05D011797 3.2e-09 67.0 49 73.5
CDE05G3403 Ceratophyllum demersum HOM05D003531 ORTHO05D004354 4.1e-09 66.6 161 28.0
Dinv10023 Davidia involucrata HOM05D010072 ORTHO05D011797 4.1e-09 66.6 109 42.2
Potri.003G203100 Populus trichocarpa HOM05D005973 ORTHO05D007285 4.1e-09 66.6 268 24.6
CARHR227290 Cardamine hirsuta HOM05D005973 ORTHO05D007285 5.4e-09 66.2 245 25.7
QL09p040247 Quercus lobata HOM05D005973 ORTHO05D007285 5.4e-09 66.2 244 26.2
ECA240G0604 Erigeron canadensis HOM05D000162 ORTHO05D000090 7.0e-09 65.9 195 30.8
QL03p008266 Quercus lobata HOM05D000162 ORTHO05D000090 9.2e-09 65.5 172 31.4
QL05p070010 Quercus lobata HOM05D000162 ORTHO05D000090 9.2e-09 65.5 172 31.4
QL10p041196 Quercus lobata HOM05D005973 ORTHO05D007285 9.2e-09 65.5 225 26.2
TPR.G35260 Trifolium pratense HOM05D000162 ORTHO05D000090 9.2e-09 65.5 172 30.2
arahy.Tifrunner.gnm1.ann1.QV0CY4 Arachis hypogaea HOM05D000162 ORTHO05D000090 2.0e-08 64.3 245 26.1
Cc09_g07760 Coffea canephora HOM05D005973 ORTHO05D007285 2.0e-08 64.3 242 26.4
Sabra03G0150000 Salix brachista HOM05D005973 ORTHO05D007285 2.0e-08 64.3 241 25.3
AT4G20740 Arabidopsis thaliana HOM05D005973 ORTHO05D007285 2.7e-08 63.9 245 24.9
Eucgr.C02304 Eucalyptus grandis HOM05D005973 ORTHO05D007285 3.5e-08 63.5 240 25.0
Eucgr.C02463 Eucalyptus grandis HOM05D005973 ORTHO05D007285 4.6e-08 63.2 240 25.0
ATR0807G010 Amborella trichopoda HOM05D006556 ORTHO05D008146 6.0e-08 62.8 208 26.0
Medtr6g068820 Medicago truncatula HOM05D000162 ORTHO05D009715 7.8e-08 62.4 116 31.9
Psat7g241480 Pisum sativum HOM05D005973 ORTHO05D007285 7.8e-08 62.4 241 27.0
SGA_v2.0_scaffold354G49737 Striga asiatica HOM05D005973 ORTHO05D007285 7.8e-08 62.4 241 26.1
Ah.10g030910 Amaranthus hybridus HOM05D005973 ORTHO05D007285 1.0e-07 62.0 252 25.4
AUR62006756 Chenopodium quinoa HOM05D000162 ORTHO05D000090 1.0e-07 62.0 179 33.0
Thecc.10G003600 Theobroma cacao HOM05D005973 ORTHO05D007285 1.0e-07 62.0 241 24.9
Cc07_g18990 Coffea canephora HOM05D000162 ORTHO05D000090 1.3e-07 61.6 144 33.3
Hund21891 Selenicereus undatus HOM05D008994 ORTHO05D010954 1.3e-07 61.6 122 37.7
Medtr6g080160 Medicago truncatula HOM05D010072 ORTHO05D020453 1.7e-07 61.2 118 34.7
Duzib106G0003 Durio zibethinus HOM05D005973 ORTHO05D007285 2.3e-07 60.8 241 24.9
TAR376G0418 Trochodendron aralioides HOM05D002825 ORTHO05D003824 2.3e-07 60.8 163 27.0
ECA240G4052 Erigeron canadensis HOM05D000162 ORTHO05D000090 3.0e-07 60.5 140 28.6
Eucgr.J01726 Eucalyptus grandis HOM05D005973 ORTHO05D007285 3.0e-07 60.5 240 25.0
Zm00001eb301300 Zea mays HOM05D005973 ORTHO05D007285 3.0e-07 60.5 247 24.7
COL.COLO4_19343 Corchorus olitorius HOM05D005973 ORTHO05D007285 3.9e-07 60.1 241 25.3
Gohir.D06G164800 Gossypium hirsutum HOM05D005973 ORTHO05D007285 3.9e-07 60.1 241 24.9
MBI11_g20198_MAGBIO Magnolia biondii HOM05D000162 ORTHO05D000090 5.0e-07 59.7 184 26.6
TPR.G2735 Trifolium pratense HOM05D005973 ORTHO05D007285 5.0e-07 59.7 242 25.6
Medtr3g030390 Medicago truncatula HOM05D035356 ORTHO05D009715 6.6e-07 59.3 129 34.9
Aqoxy5G04021 Aquilegia oxysepala HOM05D000162 ORTHO05D000090 8.6e-07 58.9 192 25.5
TAR623G1116 Trochodendron aralioides HOM05D005973 ORTHO05D007285 8.6e-07 58.9 277 24.5
TWI39G0436 Tripterygium wilfordii HOM05D003975 ORTHO05D009762 1.9e-06 57.8 177 23.7
Ca_31106_v3 Cicer arietinum L. HOM05D008100 ORTHO05D009715 2.5e-06 57.4 109 37.6
Medtr3g023180 Medicago truncatula HOM05D005973 ORTHO05D007285 2.5e-06 57.4 246 24.0
Hund13321 Selenicereus undatus HOM05D005973 ORTHO05D007285 2.5e-06 57.4 240 25.4
Gohir.A06G158900 Gossypium hirsutum HOM05D005973 ORTHO05D007285 3.3e-06 57.0 241 24.9
Sp1g14970 Schrenkiella parvula HOM05D007552 ORTHO05D009397 3.3e-06 57.0 174 27.0
MSTRG.27162 Avicennia marina HOM05D005973 ORTHO05D007285 4.3e-06 56.6 243 25.1
Medtr4g107180 Medicago truncatula HOM05D010072 ORTHO05D000090 4.3e-06 56.6 114 32.5
EL10Ac2g02881 Beta vulgaris HOM05D005973 ORTHO05D007285 5.6e-06 56.2 266 24.8
AUR62000309 Chenopodium quinoa HOM05D006174 ORTHO05D007987 5.6e-06 56.2 111 35.1
Ca_25879_v3 Cicer arietinum L. HOM05D005973 ORTHO05D007285 7.3e-06 55.8 242 26.0
ECA240G3581 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.3e-06 55.8 170 24.7
PSO170G2530 Papaver somniferum HOM05D008994 ORTHO05D010954 7.3e-06 55.8 108 34.3
vmacro13717 Vaccinium macrocarpon HOM05D000162 ORTHO05D000090 7.3e-06 55.8 265 20.8
Ca_09585_v3 Cicer arietinum L. HOM05D005973 ORTHO05D007285 9.5e-06 55.5 223 26.9
Gorai.010G192200 Gossypium raimondii HOM05D005973 ORTHO05D007285 9.5e-06 55.5 241 24.1
Lj2g0004689 Lotus japonicus HOM05D010072 ORTHO05D011797 9.5e-06 55.5 49 53.1
THA.LOC104808118 Tarenaya hassleriana HOM05D006918 ORTHO05D008525 9.5e-06 55.5 159 27.7


User provided reference genes

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