Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g063810 Medicago truncatula HOM05D001538 ORTHO05D000007 7.6e-94 347.1 164 100.0
Medtr0195s0010 Medicago truncatula HOM05D001538 ORTHO05D000007 1.2e-41 173.7 121 68.6
Medtr0195s0020 Medicago truncatula HOM05D001538 ORTHO05D000007 1.2e-41 173.7 121 68.6
Medtr0566s0020 Medicago truncatula HOM05D001538 ORTHO05D000007 3.4e-41 172.2 124 67.7
Medtr1g034250 Medicago truncatula HOM05D001538 ORTHO05D000007 3.5e-38 162.2 128 61.7
Medtr4g096760 Medicago truncatula HOM05D001538 ORTHO05D000007 4.7e-35 151.8 131 56.5
Medtr6g022050 Medicago truncatula HOM05D001538 ORTHO05D000007 3.4e-33 145.6 129 55.8
Medtr6g045237 Medicago truncatula HOM05D001538 ORTHO05D000007 1.9e-31 139.8 122 50.8
Medtr1g033070 Medicago truncatula HOM05D001538 ORTHO05D000007 1.6e-30 136.7 124 50.8
TPR.G15063 Trifolium pratense HOM05D001538 ORTHO05D000007 4.6e-30 135.2 130 52.3
Medtr0012s0140 Medicago truncatula HOM05D001538 ORTHO05D000007 3.9e-29 132.1 102 52.0
TPR.G16012 Trifolium pratense HOM05D001538 ORTHO05D000007 1.1e-28 130.6 120 52.5
TPR.G15478 Trifolium pratense HOM05D001538 ORTHO05D000007 1.5e-28 130.2 120 51.7
Medtr8g445450 Medicago truncatula HOM05D001538 ORTHO05D000007 3.3e-28 129.0 99 52.5
Medtr7g013110 Medicago truncatula HOM05D016686 ORTHO05D000007 1.6e-27 126.7 112 50.9
TPR.G14439 Trifolium pratense HOM05D000092 ORTHO05D000042 2.8e-27 125.9 107 54.2
Medtr8g063620 Medicago truncatula HOM05D001538 ORTHO05D000007 6.2e-27 124.8 105 53.3
TPR.G19027 Trifolium pratense HOM05D001538 ORTHO05D000007 2.3e-26 122.9 117 50.4
Medtr2g034230 Medicago truncatula HOM05D001538 ORTHO05D000007 4.0e-26 122.1 109 51.4
Medtr8g069240 Medicago truncatula HOM05D001538 ORTHO05D000007 2.0e-25 119.8 81 65.4
Medtr2g438650 Medicago truncatula HOM05D001538 ORTHO05D000007 4.9e-24 115.2 129 44.2
TPR.G21617 Trifolium pratense HOM05D001538 ORTHO05D000007 1.4e-23 113.6 128 40.6
Medtr3g464250 Medicago truncatula HOM05D001538 ORTHO05D000007 5.4e-23 111.7 69 71.0
Medtr5g071600 Medicago truncatula HOM05D001538 ORTHO05D000007 1.2e-22 110.5 81 66.7
Lalb_Chr09g0334161 Lupinus albus HOM05D001538 ORTHO05D000007 2.7e-22 109.4 127 44.1
Medtr7g063160 Medicago truncatula HOM05D001538 ORTHO05D000007 2.7e-22 109.4 76 65.8
TPR.G33855 Trifolium pratense HOM05D001538 ORTHO05D000007 3.5e-22 109.0 130 40.0
Medtr5g048840 Medicago truncatula HOM05D001538 ORTHO05D000007 1.0e-21 107.5 97 51.5
Phvul.002G232500 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 2.3e-21 106.3 114 45.6
Medtr7g445700 Medicago truncatula HOM05D001538 ORTHO05D000007 6.6e-21 104.8 129 38.8
Phvul.004G102300 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 6.6e-21 104.8 119 42.0
TPR.G27280 Trifolium pratense HOM05D001538 ORTHO05D000007 6.6e-21 104.8 91 49.5
TPR.G39433 Trifolium pratense HOM05D001538 ORTHO05D000007 8.6e-21 104.4 91 49.5
Medtr4g108010 Medicago truncatula HOM05D001538 ORTHO05D000007 1.5e-20 103.6 118 42.4
Lalb_Chr02g0151671 Lupinus albus HOM05D001538 ORTHO05D000007 5.6e-20 101.7 127 40.9
Medtr4g060870 Medicago truncatula HOM05D001538 ORTHO05D000007 5.6e-20 101.7 73 60.3
Medtr4g093740 Medicago truncatula HOM05D001538 ORTHO05D000007 5.6e-20 101.7 116 43.1
Medtr3g071850 Medicago truncatula HOM05D000051 ORTHO05D000015 9.5e-20 100.9 110 44.5
FvH4_7g19511 Fragaria vesca HOM05D001538 ORTHO05D000007 3.6e-19 99.0 109 44.0
Medtr0488s0020 Medicago truncatula HOM05D001538 ORTHO05D000007 3.6e-19 99.0 118 38.1
TPR.G23606 Trifolium pratense HOM05D001538 ORTHO05D000007 3.6e-19 99.0 74 59.5
TPR.G28466 Trifolium pratense HOM05D001538 ORTHO05D000007 4.7e-19 98.6 121 37.2
Phvul.001G160900 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 6.2e-19 98.2 89 49.4
Medtr0063s0100 Medicago truncatula HOM05D001538 ORTHO05D000007 1.1e-18 97.4 83 50.6
Medtr1g032900 Medicago truncatula HOM05D016686 ORTHO05D000007 1.8e-18 96.7 96 45.8
FvH4_3g10372 Fragaria vesca HOM05D001538 ORTHO05D000007 2.4e-18 96.3 103 37.9
FvH4_4g08213 Fragaria vesca HOM05D001538 ORTHO05D000007 3.1e-18 95.9 132 35.6
FvH4_4g05601 Fragaria vesca HOM05D001538 ORTHO05D000007 4.0e-18 95.5 122 38.5
Phvul.008G032300 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 5.2e-18 95.1 90 48.9
Medtr3g449600 Medicago truncatula HOM05D001538 ORTHO05D000007 8.9e-18 94.4 135 37.8
Medtr4g035630 Medicago truncatula HOM05D001538 ORTHO05D000007 1.2e-17 94.0 97 39.2
Medtr0014s0120 Medicago truncatula HOM05D001538 ORTHO05D000007 2.0e-17 93.2 99 42.4
Medtr3g062250 Medicago truncatula HOM05D027863 ORTHO05D000007 2.0e-17 93.2 102 42.2
TPR.G21298 Trifolium pratense HOM05D001538 ORTHO05D000007 2.0e-17 93.2 102 41.2
FvH4_1g13572 Fragaria vesca HOM05D001538 ORTHO05D000007 2.6e-17 92.8 119 38.7
Medtr7g111460 Medicago truncatula HOM05D001538 ORTHO05D000007 2.6e-17 92.8 119 39.5
Phvul.001G068900 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 3.4e-17 92.4 104 42.3
TPR.G13832 Trifolium pratense HOM05D001538 ORTHO05D000007 3.4e-17 92.4 119 37.0
Phvul.004G102400 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 4.4e-17 92.0 102 40.2
Psat3g128360 Pisum sativum HOM05D001538 ORTHO05D000007 4.4e-17 92.0 102 40.2
Medtr3g050340 Medicago truncatula HOM05D001538 ORTHO05D000007 5.8e-17 91.7 80 47.5
RcHm_v2.0_Chr3g0453631 Rosa chinensis HOM05D001538 ORTHO05D000007 1.3e-16 90.5 128 35.9
FvH4_7g18611 Fragaria vesca HOM05D001538 ORTHO05D000007 1.7e-16 90.1 102 38.2
Medtr6g471850 Medicago truncatula HOM05D001538 ORTHO05D000007 2.9e-16 89.4 122 42.6
Medtr8g045340 Medicago truncatula HOM05D001538 ORTHO05D000007 6.4e-16 88.2 69 56.5
TPR.G39675 Trifolium pratense HOM05D001538 ORTHO05D000007 6.4e-16 88.2 121 36.4
FvH4_2g26101 Fragaria vesca HOM05D001538 ORTHO05D000007 8.4e-16 87.8 143 32.9
FvH4_2g03281 Fragaria vesca HOM05D001538 ORTHO05D000007 1.9e-15 86.7 116 33.6
Phvul.004G102600 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 1.9e-15 86.7 94 40.4
TPR.G22375 Trifolium pratense HOM05D001538 ORTHO05D000007 1.9e-15 86.7 86 47.7
Medtr2g036980 Medicago truncatula HOM05D001538 ORTHO05D000007 2.4e-15 86.3 123 37.4
Medtr8g104770 Medicago truncatula HOM05D001538 ORTHO05D000007 3.2e-15 85.9 121 34.7
TPR.G40148 Trifolium pratense HOM05D001538 ORTHO05D000007 3.2e-15 85.9 101 39.6
Phvul.004G102200 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 4.2e-15 85.5 101 39.6
FvH4_7g13962 Fragaria vesca HOM05D001538 ORTHO05D000007 5.4e-15 85.1 109 36.7
Medtr6g076110 Medicago truncatula HOM05D001538 ORTHO05D000007 5.4e-15 85.1 94 38.3
FvH4_3g06911 Fragaria vesca HOM05D001538 ORTHO05D000007 7.1e-15 84.7 103 37.9
Medtr2g074890 Medicago truncatula HOM05D026100 ORTHO05D000007 7.1e-15 84.7 84 40.5
Psat4g055000 Pisum sativum HOM05D001538 ORTHO05D000007 9.2e-15 84.3 102 36.3
Medtr2g048290 Medicago truncatula HOM05D001538 ORTHO05D000007 1.6e-14 83.6 94 42.6
Medtr5g037520 Medicago truncatula HOM05D001538 ORTHO05D000007 1.6e-14 83.6 118 36.4
Medtr6g003940 Medicago truncatula HOM05D002309 ORTHO05D000007 1.6e-14 83.6 84 45.2
Lj8C741T17 Lonicera japonica HOM05D001538 ORTHO05D000007 2.7e-14 82.8 118 33.9
TPR.G27799 Trifolium pratense HOM05D001538 ORTHO05D000007 3.5e-14 82.4 108 42.6
TPR.G576 Trifolium pratense HOM05D001538 ORTHO05D000007 3.5e-14 82.4 102 37.3
Lj9C692G13 Lonicera japonica HOM05D001538 ORTHO05D000007 4.6e-14 82.0 102 36.3
Lj8C740T13 Lonicera japonica HOM05D001538 ORTHO05D000007 7.8e-14 81.3 139 30.9
Lju1953C0G19 Lonicera japonica HOM05D001538 ORTHO05D000007 7.8e-14 81.3 102 36.3
Lju2422C0T10 Lonicera japonica HOM05D001538 ORTHO05D000007 7.8e-14 81.3 102 36.3
Phvul.011G112766 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 7.8e-14 81.3 102 41.2
Psat5g123120 Pisum sativum HOM05D001538 ORTHO05D000007 7.8e-14 81.3 102 38.2
Lj9C691T2 Lonicera japonica HOM05D001538 ORTHO05D000007 1.0e-13 80.9 101 34.7
Lj8C744T6 Lonicera japonica HOM05D001538 ORTHO05D000007 1.3e-13 80.5 101 34.7
TPR.G19697 Trifolium pratense HOM05D001538 ORTHO05D004353 1.7e-13 80.1 92 38.0
TPR.G2656 Trifolium pratense HOM05D001538 ORTHO05D000007 2.3e-13 79.7 88 40.9
Medtr5g046930 Medicago truncatula HOM05D001538 ORTHO05D000007 5.1e-13 78.6 92 37.0
Lj2A1219T39 Lonicera japonica HOM05D001538 ORTHO05D000007 8.7e-13 77.8 102 33.3
Medtr3g079805 Medicago truncatula HOM05D001538 ORTHO05D000007 1.5e-12 77.0 130 35.4
Lj1P491T18 Lonicera japonica HOM05D001538 ORTHO05D000007 4.3e-12 75.5 139 30.9
Medtr6g042480 Medicago truncatula HOM05D001538 ORTHO05D000007 4.3e-12 75.5 95 37.9
Psat7g105720 Pisum sativum HOM05D001538 ORTHO05D000007 4.3e-12 75.5 129 31.8
Medtr0098s0100 Medicago truncatula HOM05D001538 ORTHO05D000007 5.6e-12 75.1 74 43.2
TPR.G20035 Trifolium pratense HOM05D001538 ORTHO05D000007 5.6e-12 75.1 65 50.8
Medtr1024s0010 Medicago truncatula HOM05D001538 ORTHO05D000007 7.3e-12 74.7 51 66.7
Medtr7g451180 Medicago truncatula HOM05D001538 ORTHO05D000007 7.3e-12 74.7 71 49.3
FvH4_2g29541 Fragaria vesca HOM05D001538 ORTHO05D000007 9.6e-12 74.3 82 40.2
Medtr2g032880 Medicago truncatula HOM05D001538 ORTHO05D000007 9.6e-12 74.3 49 61.2
TPR.G4426 Trifolium pratense HOM05D001538 ORTHO05D000007 1.2e-11 73.9 50 62.0
TPR.G37617 Trifolium pratense HOM05D001538 ORTHO05D000007 1.6e-11 73.6 66 43.9
Lj2C1218T15 Lonicera japonica HOM05D001538 ORTHO05D000007 2.1e-11 73.2 102 34.3
Lj4A923G18 Lonicera japonica HOM05D004198 ORTHO05D006470 2.1e-11 73.2 152 27.6
Medtr5g067840 Medicago truncatula HOM05D001538 ORTHO05D000007 2.1e-11 73.2 52 57.7
Lj9C305T8 Lonicera japonica HOM05D001538 ORTHO05D000007 3.6e-11 72.4 103 27.2
Medtr8g466790 Medicago truncatula HOM05D001538 ORTHO05D000007 3.6e-11 72.4 134 34.3
Aqoxy5G00984 Aquilegia oxysepala HOM05D002145 ORTHO05D000007 4.7e-11 72.0 122 32.8
Medtr5g037100 Medicago truncatula HOM05D001538 ORTHO05D000007 4.7e-11 72.0 102 36.3
TPR.G25770 Trifolium pratense HOM05D001538 ORTHO05D000007 4.7e-11 72.0 68 45.6
Medtr6g016995 Medicago truncatula HOM05D001538 ORTHO05D000007 6.2e-11 71.6 63 50.8
Medtr7g006745 Medicago truncatula HOM05D001538 ORTHO05D000007 6.2e-11 71.6 118 31.4
Psat1g141600 Pisum sativum HOM05D001538 ORTHO05D000007 6.2e-11 71.6 98 38.8
TPR.G28566 Trifolium pratense HOM05D001538 ORTHO05D000007 1.1e-10 70.9 66 47.0
Medtr5g079060 Medicago truncatula HOM05D001538 ORTHO05D000007 1.4e-10 70.5 117 34.2
TPR.G7611 Trifolium pratense HOM05D001538 ORTHO05D000007 1.4e-10 70.5 61 44.3
Lj9A692G58 Lonicera japonica HOM05D001538 ORTHO05D000007 1.8e-10 70.1 86 34.9
Medtr1g071830 Medicago truncatula HOM05D001538 ORTHO05D000007 2.4e-10 69.7 44 61.4
Medtr7g063750 Medicago truncatula HOM05D001538 ORTHO05D000007 2.4e-10 69.7 69 44.9
Medtr1g062320 Medicago truncatula HOM05D001538 ORTHO05D000007 3.1e-10 69.3 39 79.5
Lj5P781T15 Lonicera japonica HOM05D001538 ORTHO05D000007 5.2e-10 68.6 103 29.1
Medtr2g054220 Medicago truncatula HOM05D001538 ORTHO05D000007 6.9e-10 68.2 42 66.7
Psat4g039840 Pisum sativum HOM05D001538 ORTHO05D000007 9.0e-10 67.8 88 34.1
Medtr8g022850 Medicago truncatula HOM05D001538 ORTHO05D000007 1.2e-09 67.4 98 32.7
Medtr8g046080 Medicago truncatula HOM05D001538 ORTHO05D000007 1.2e-09 67.4 66 48.5
Psat7g029600 Pisum sativum HOM05D001538 ORTHO05D000007 1.2e-09 67.4 134 35.1
Aqoxy3G01719 Aquilegia oxysepala HOM05D002145 ORTHO05D000007 1.5e-09 67.0 112 34.8
Lalb_Chr13g0290751 Lupinus albus HOM05D000003 ORTHO05D000004 1.5e-09 67.0 43 62.8
Medtr1g093780 Medicago truncatula HOM05D001538 ORTHO05D000007 1.5e-09 67.0 117 34.2
Medtr6g043680 Medicago truncatula HOM05D001538 ORTHO05D000007 1.5e-09 67.0 52 57.7
Medtr8g104170 Medicago truncatula HOM05D001538 ORTHO05D000007 1.5e-09 67.0 79 35.4
Psat3g124560 Pisum sativum HOM05D001538 ORTHO05D000007 2.6e-09 66.2 111 33.3
Medtr3g465060 Medicago truncatula HOM05D001538 ORTHO05D000007 3.4e-09 65.9 64 46.9
TPR.G25855 Trifolium pratense HOM05D001538 ORTHO05D000007 3.4e-09 65.9 85 38.8
Aqoxy3G02984 Aquilegia oxysepala HOM05D002145 ORTHO05D000007 4.4e-09 65.5 119 32.8
Aqoxy7G02800 Aquilegia oxysepala HOM05D000024 ORTHO05D000007 4.4e-09 65.5 115 31.3
Aqoxy4G00128 Aquilegia oxysepala HOM05D000003 ORTHO05D000007 7.6e-09 64.7 123 34.1
Aqoxy2G02235 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 1.3e-08 63.9 120 31.7
Aqoxy2G02256 Aquilegia oxysepala HOM05D002145 ORTHO05D000007 1.3e-08 63.9 120 31.7
Medtr6g084150 Medicago truncatula HOM05D001538 ORTHO05D000007 1.3e-08 63.9 61 45.9
Phvul.002G214200 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 1.3e-08 63.9 73 42.5
Psat4g149040 Pisum sativum HOM05D001538 ORTHO05D000007 1.7e-08 63.5 78 39.7
Lj5A648T14 Lonicera japonica HOM05D010180 ORTHO05D000007 2.9e-08 62.8 74 31.1
Phvul.009G209000 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 2.9e-08 62.8 97 32.0
Aqoxy4G01322 Aquilegia oxysepala HOM05D000003 ORTHO05D000651 4.9e-08 62.0 110 31.8
Medtr7g053210 Medicago truncatula HOM05D001538 ORTHO05D000007 6.4e-08 61.6 62 45.2
Lj9C692T4 Lonicera japonica HOM05D001538 ORTHO05D000007 8.4e-08 61.2 70 35.7
Medtr2g031910 Medicago truncatula HOM05D001538 ORTHO05D000007 8.4e-08 61.2 39 59.0
Medtr5g036050 Medicago truncatula HOM05D049287 ORTHO05D000007 1.1e-07 60.8 43 53.5
Lj4A924T29 Lonicera japonica HOM05D001538 ORTHO05D000007 1.4e-07 60.5 84 31.0
Aqoxy2G01991 Aquilegia oxysepala HOM05D002145 ORTHO05D000007 2.4e-07 59.7 102 32.4
Medtr1g007020 Medicago truncatula HOM05D001538 ORTHO05D000007 2.4e-07 59.7 34 76.5
Medtr5g047910 Medicago truncatula HOM05D001538 ORTHO05D000007 2.4e-07 59.7 88 34.1
Lj3P676T23 Lonicera japonica HOM05D001538 ORTHO05D000007 3.2e-07 59.3 102 23.5
Lju2422A0T21 Lonicera japonica HOM05D001538 ORTHO05D000007 3.2e-07 59.3 72 34.7
Medtr4g045863 Medicago truncatula HOM05D001538 ORTHO05D000007 3.2e-07 59.3 80 35.0
Psat4g031920 Pisum sativum HOM05D001538 ORTHO05D000007 3.2e-07 59.3 73 38.4
Medtr6g464500 Medicago truncatula HOM05D001538 ORTHO05D000007 4.2e-07 58.9 96 34.4
Aqoxy1G03637 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 5.4e-07 58.5 105 33.3
Medtr2g064630 Medicago truncatula HOM05D001538 ORTHO05D000007 5.4e-07 58.5 52 46.2
Medtr4g009745 Medicago truncatula HOM05D001538 ORTHO05D000007 5.4e-07 58.5 99 31.3
TPR.G27759 Trifolium pratense HOM05D001538 ORTHO05D000007 5.4e-07 58.5 39 61.5
ATR0759G056 Amborella trichopoda HOM05D002145 ORTHO05D000007 9.3e-07 57.8 121 30.6
Medtr1g040935 Medicago truncatula HOM05D001538 ORTHO05D000007 9.3e-07 57.8 38 68.4
Medtr7g063170 Medicago truncatula HOM05D001538 ORTHO05D000007 9.3e-07 57.8 35 68.6
Aqoxy2G01513 Aquilegia oxysepala HOM05D000024 ORTHO05D000007 1.6e-06 57.0 90 31.1
Lalb_Chr10g0106351 Lupinus albus HOM05D001538 ORTHO05D000007 4.6e-06 55.5 49 49.0
Medtr3g032560 Medicago truncatula HOM05D001538 ORTHO05D000007 6.0e-06 55.1 33 69.7
Medtr1g032820 Medicago truncatula HOM05D001538 ORTHO05D000007 7.8e-06 54.7 39 69.2


User provided reference genes

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