Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g063370 Medicago truncatula HOM05D005747 ORTHO05D007159 2.3e-54 215.3 107 100.0
Psat6g073040 Pisum sativum HOM05D005747 ORTHO05D007159 2.7e-47 191.8 107 87.9
Ca_11494_v3 Cicer arietinum L. HOM05D005747 ORTHO05D007159 2.3e-46 188.7 107 86.0
TPR.G25697 Trifolium pratense HOM05D005747 ORTHO05D007159 5.1e-46 187.6 101 91.1
Glyma.13G143500 Glycine max HOM05D005747 ORTHO05D007159 1.3e-41 172.9 107 79.4
Lj5g0010104 Lotus japonicus HOM05D005747 ORTHO05D007159 1.3e-41 172.9 107 78.5
Glyma.10G057000 Glycine max HOM05D005747 ORTHO05D007159 1.9e-40 169.1 107 76.6
arahy.Tifrunner.gnm1.ann1.548B55 Arachis hypogaea HOM05D005747 ORTHO05D007159 5.4e-40 167.5 107 78.5
Lalb_Chr02g0155891 Lupinus albus HOM05D005747 ORTHO05D007159 5.4e-40 167.5 107 74.8
arahy.Tifrunner.gnm1.ann1.GC88CS Arachis hypogaea HOM05D005747 ORTHO05D007159 7.1e-40 167.2 107 77.6
arahy.Tifrunner.gnm1.ann1.47U1LD Arachis hypogaea HOM05D005747 ORTHO05D007159 1.2e-39 166.4 107 77.6
arahy.Tifrunner.gnm1.ann1.W5J3RK Arachis hypogaea HOM05D005747 ORTHO05D007159 2.1e-39 165.6 107 77.6
PGR004G0006 Punica granatum HOM05D005747 ORTHO05D007159 7.8e-39 163.7 107 73.8
VMungo1383G0680 Vigna mungo HOM05D005747 ORTHO05D007159 7.8e-39 163.7 107 75.7
Haze_20552 Corylus avellana HOM05D005747 ORTHO05D007159 1.3e-38 162.9 107 74.8
Cfa020071 Carpinus fangiana HOM05D005747 ORTHO05D007159 3.0e-38 161.8 107 72.9
Atru.chr8.1820 Acer truncatum HOM05D005747 ORTHO05D007159 3.9e-38 161.4 105 73.3
Haze_20124 Corylus avellana HOM05D005747 ORTHO05D007159 6.6e-38 160.6 107 72.0
MSTRG.19175 Avicennia marina HOM05D005747 ORTHO05D007159 8.6e-38 160.2 104 74.0
Glyma.19G183500 Glycine max HOM05D005747 ORTHO05D007159 8.6e-38 160.2 107 75.7
QL07p043606 Quercus lobata HOM05D005747 ORTHO05D007159 1.1e-37 159.8 106 73.6
Actinidia28901 Actinidia chinensis HOM05D005747 ORTHO05D007159 1.9e-37 159.1 105 70.5
Actinidia08777 Actinidia chinensis HOM05D005747 ORTHO05D007159 2.5e-37 158.7 105 70.5
Hma1.2p1_0205F.1_g087080 Hydrangea macrophylla HOM05D005747 ORTHO05D007159 2.5e-37 158.7 104 76.0
Manes.08G009800 Manihot esculenta HOM05D005747 ORTHO05D007159 2.5e-37 158.7 107 73.8
Migut.L01698 Erythranthe guttata HOM05D005747 ORTHO05D007159 3.3e-37 158.3 105 70.5
Phvul.001G178800 Phaseolus vulgaris HOM05D005747 ORTHO05D007159 4.3e-37 157.9 107 72.9
PSO063G6473 Papaver somniferum HOM05D005747 ORTHO05D007159 5.6e-37 157.5 105 74.3
PSO339G2391 Papaver somniferum HOM05D005747 ORTHO05D007159 5.6e-37 157.5 105 74.3
Psat0s2933g0080 Pisum sativum HOM05D005747 ORTHO05D007159 5.6e-37 157.5 107 71.0
vmacro07288 Vaccinium macrocarpon HOM05D005747 ORTHO05D007159 9.6e-37 156.8 105 71.4
Prupe.6G232700 Prunus persica HOM05D005747 ORTHO05D007159 1.2e-36 156.4 107 71.0
CSS0033757 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 1.6e-36 156.0 105 70.5
SGA_v2.0_scaffold75G24844 Striga asiatica HOM05D005747 ORTHO05D007159 1.6e-36 156.0 100 77.0
Thecc.05G065200 Theobroma cacao HOM05D005747 ORTHO05D007159 1.6e-36 156.0 107 72.9
RcHm_v2.0_Chr3g0470141 Rosa chinensis HOM05D005747 ORTHO05D007159 2.1e-36 155.6 105 72.4
TAR369G0407 Trochodendron aralioides HOM05D005747 ORTHO05D007159 2.1e-36 155.6 105 72.4
CSS0022084 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 2.8e-36 155.2 105 70.5
CSS0033637 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 3.6e-36 154.8 105 70.5
Medtr7g101880 Medicago truncatula HOM05D005747 ORTHO05D007159 3.6e-36 154.8 102 73.5
SalBow5G0179 Salvia bowleyana HOM05D005747 ORTHO05D007159 4.7e-36 154.5 105 68.6
SalBow5G1412 Salvia bowleyana HOM05D005747 ORTHO05D007159 4.7e-36 154.5 105 68.6
Rhsim03G0092400 Rhododendron simsii HOM05D005747 ORTHO05D007159 6.2e-36 154.1 105 70.5
Duzib093G2107 Durio zibethinus HOM05D005747 ORTHO05D007159 8.1e-36 153.7 107 71.0
Cc06_g04180 Coffea canephora HOM05D005747 ORTHO05D007159 1.1e-35 153.3 105 69.5
Nn7g38309 Nelumbo nucifera HOM05D005747 ORTHO05D007159 1.4e-35 152.9 107 72.0
THA.LOC104826911 Tarenaya hassleriana HOM05D005747 ORTHO05D007159 1.4e-35 152.9 105 71.4
Peaxi162Scf00701g00029 Petunia axillaris HOM05D005747 ORTHO05D007159 1.8e-35 152.5 105 70.5
TWI74G1168 Tripterygium wilfordii HOM05D005747 ORTHO05D007159 1.8e-35 152.5 107 71.0
Ciclev10013173m.g Citrus clementina HOM05D005747 ORTHO05D007159 3.1e-35 151.8 105 71.4
Eucgr.A01688 Eucalyptus grandis HOM05D005747 ORTHO05D007159 3.1e-35 151.8 107 69.2
Potri.006G125300 Populus trichocarpa HOM05D005747 ORTHO05D007159 3.1e-35 151.8 105 70.5
Thhalv10015093m.g Eutrema salsugineum HOM05D005747 ORTHO05D007159 4.0e-35 151.4 101 74.3
Duzib128G1360 Durio zibethinus HOM05D005747 ORTHO05D007159 6.9e-35 150.6 107 70.1
FAN05G2010 Fragaria x ananassa HOM05D005747 ORTHO05D007159 6.9e-35 150.6 105 70.5
TPR.G9369 Trifolium pratense HOM05D005747 ORTHO05D007159 6.9e-35 150.6 107 70.1
MD04G1094200 Malus domestica HOM05D005747 ORTHO05D007159 9.0e-35 150.2 107 68.2
MD12G1113800 Malus domestica HOM05D005747 ORTHO05D007159 1.2e-34 149.8 107 68.2
CANSAT80G0760 Cannabis sativa HOM05D005747 ORTHO05D007159 1.5e-34 149.4 107 69.2
Dinv37311 Davidia involucrata HOM05D005747 ORTHO05D007159 1.5e-34 149.4 105 71.4
Lalb_Chr20g0112621 Lupinus albus HOM05D005747 ORTHO05D007159 1.5e-34 149.4 107 69.2
CAN.G900.40 Capsicum annuum HOM05D005747 ORTHO05D007159 2.6e-34 148.7 105 67.6
CARHR210000 Cardamine hirsuta HOM05D005747 ORTHO05D007159 2.6e-34 148.7 101 73.3
Solyc09g008140.3 Solanum lycopersicum HOM05D005747 ORTHO05D007159 2.6e-34 148.7 105 68.6
Sopen09g002940 Solanum pennellii HOM05D005747 ORTHO05D007159 2.6e-34 148.7 105 68.6
FvH4_6g16280 Fragaria vesca HOM05D005747 ORTHO05D007159 3.4e-34 148.3 105 68.6
FAN14G5754 Fragaria x ananassa HOM05D005747 ORTHO05D007159 3.4e-34 148.3 105 68.6
Aqoxy1G01163 Aquilegia oxysepala HOM05D005747 ORTHO05D007159 4.4e-34 147.9 105 67.6
C02p00970 Brassica napus HOM05D001005 ORTHO05D000836 4.4e-34 147.9 100 75.0
GSVIVG01025728001 Vitis vinifera HOM05D005747 ORTHO05D007159 4.4e-34 147.9 107 69.2
MELO3C009353.2 Cucumis melo HOM05D005747 ORTHO05D007159 5.8e-34 147.5 107 67.3
FAN02G1695 Fragaria x ananassa HOM05D005747 ORTHO05D007159 5.8e-34 147.5 105 68.6
Gohir.D09G143100 Gossypium hirsutum HOM05D005747 ORTHO05D007159 5.8e-34 147.5 107 69.2
Gorai.006G164600 Gossypium raimondii HOM05D005747 ORTHO05D007159 5.8e-34 147.5 107 69.2
Phvul.007G149300 Phaseolus vulgaris HOM05D005747 ORTHO05D007159 5.8e-34 147.5 107 69.2
Aa31LG3G2310 Aethionema arabicum HOM05D005747 ORTHO05D007159 7.6e-34 147.1 105 66.7
EL10Ac1g00026 Beta vulgaris HOM05D005747 ORTHO05D007159 9.9e-34 146.7 105 70.5
ClCG10G020160 Citrullus lanatus HOM05D005747 ORTHO05D007159 9.9e-34 146.7 107 66.4
FAN09G1333 Fragaria x ananassa HOM05D005747 ORTHO05D007159 9.9e-34 146.7 105 68.6
TWI77G0618 Tripterygium wilfordii HOM05D005747 ORTHO05D007159 9.9e-34 146.7 107 70.1
TAR633G0139 Trochodendron aralioides HOM05D005747 ORTHO05D007159 9.9e-34 146.7 105 70.5
BcaC03g13014 Brassica carinata HOM05D005747 ORTHO05D007159 1.3e-33 146.4 100 74.0
Gohir.A09G147500 Gossypium hirsutum HOM05D005747 ORTHO05D007159 1.3e-33 146.4 107 69.2
Potri.016G091900 Populus trichocarpa HOM05D005747 ORTHO05D007159 1.3e-33 146.4 105 67.6
CsaV3_3G035950 Cucumis sativus L. HOM05D005747 ORTHO05D007159 1.7e-33 146.0 107 65.4
AL6G12680 Arabidopsis lyrata HOM05D005747 ORTHO05D007159 3.8e-33 144.8 100 71.0
Sp6g39390 Schrenkiella parvula HOM05D005747 ORTHO05D007159 8.4e-33 143.7 101 71.3
Sed0019850 Sechium edule HOM05D005747 ORTHO05D007159 8.4e-33 143.7 107 67.3
Glyma.03G182900 Glycine max HOM05D005747 ORTHO05D007159 1.4e-32 142.9 136 58.8
Carub.0006s0216 Capsella rubella HOM05D005747 ORTHO05D007159 3.2e-32 141.7 101 68.3
Sc02g0001670 Simmondsia chinensis HOM05D005747 ORTHO05D007159 3.2e-32 141.7 98 73.5
AT5G03345 Arabidopsis thaliana HOM05D005747 ORTHO05D007159 4.2e-32 141.4 101 68.3
Manes.09G066900 Manihot esculenta HOM05D005747 ORTHO05D007159 4.2e-32 141.4 107 68.2
unitig_578.g16384 Utricularia gibba HOM05D005747 ORTHO05D007159 5.4e-32 141.0 99 65.7
Zm00001eb136890 Zea mays HOM05D005747 ORTHO05D007159 1.6e-31 139.4 104 64.4
Zm00001eb028740 Zea mays HOM05D005747 ORTHO05D007159 7.8e-31 137.1 105 61.9
Ah.05g172440 Amaranthus hybridus HOM05D005747 ORTHO05D007159 1.7e-30 136.0 105 65.7
ECA233G4120 Erigeron canadensis HOM05D005747 ORTHO05D007159 3.0e-30 135.2 102 63.7
Os12g0566400 Oryza sativa ssp. japonica HOM05D005747 ORTHO05D007159 3.0e-30 135.2 105 61.0
Lsat_1_v5_gn_6_25181 Lactuca sativa HOM05D005747 ORTHO05D007159 5.1e-30 134.4 102 64.7
Nitab4.5_0000578g0140 Nicotiana tabacum HOM05D005747 ORTHO05D007159 8.7e-30 133.7 105 63.8
Nitab4.5_0002632g0020 Nicotiana tabacum HOM05D005747 ORTHO05D007159 8.7e-30 133.7 105 63.8
PGSC0003DMG400003860 Solanum tuberosum HOM05D005747 ORTHO05D007159 2.1e-28 129.0 133 53.4
HanXRQChr02g0051611 Helianthus annuus HOM05D005747 ORTHO05D007159 3.6e-28 128.3 104 61.5
HPP92_009808 Vanilla planifolia HOM05D005747 ORTHO05D007159 3.6e-28 128.3 92 69.6
HanXRQChr13g0401071 Helianthus annuus HOM05D005747 ORTHO05D007159 4.8e-28 127.9 105 57.1
CDE06G0870 Ceratophyllum demersum HOM05D005747 ORTHO05D007159 8.1e-28 127.1 94 66.0
Mapoly0011s0153 Marchantia polymorpha HOM05D005747 ORTHO05D007159 1.2e-26 123.2 97 61.9
SEGI_15519 Sequoiadendron giganteum HOM05D005747 ORTHO05D007159 2.0e-26 122.5 93 63.4
Gorai.006G061900 Gossypium raimondii HOM05D005747 ORTHO05D007159 3.4e-26 121.7 109 59.6
SMO137G0056 Selaginella moellendorffii HOM05D005747 ORTHO05D007159 1.3e-25 119.8 99 58.6
Hma1.2p1_0205F.1_g087090 Hydrangea macrophylla HOM05D005747 ORTHO05D007159 4.9e-25 117.9 76 77.6
Pp3c5_16080 Physcomitrium patens HOM05D005747 ORTHO05D007159 1.1e-24 116.7 98 57.1
Oeu053677.1 Olea europaea HOM05D005747 ORTHO05D007159 5.4e-24 114.4 78 71.8
Lj2A1109T71 Lonicera japonica HOM05D005747 ORTHO05D007159 9.3e-24 113.6 91 62.6
DCAR_020822 Daucus carota HOM05D005747 ORTHO05D007159 1.6e-23 112.8 76 72.4
Hund20347 Selenicereus undatus HOM05D005747 ORTHO05D007159 6.0e-23 110.9 77 74.0
AagrBONN_evm.TU.Sc2ySwM_362.1648 Anthoceros agrestis HOM05D005747 ORTHO05D007159 2.3e-22 109.0 83 63.9
Pp3c6_8930 Physcomitrium patens HOM05D005747 ORTHO05D007159 5.1e-22 107.8 96 54.2
Oeu045224.1 Olea europaea HOM05D005747 ORTHO05D007159 2.5e-21 105.5 86 64.0
CSS0043170 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 9.6e-21 103.6 70 74.3
CSS0041044 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 8.1e-20 100.5 70 72.9
CiPaw.09G219400 Carya illinoinensis HOM05D005747 ORTHO05D007159 8.1e-20 100.5 104 55.8
Sabra16G0097500 Salix brachista HOM05D005747 ORTHO05D007159 2.4e-19 99.0 74 64.9
ATR0104G002 Amborella trichopoda HOM05D005747 ORTHO05D007159 2.9e-17 92.0 79 58.2
Sed0003931 Sechium edule HOM05D005747 ORTHO05D007159 4.9e-17 91.3 68 63.2
Lalb_Chr02g0156001 Lupinus albus HOM05D005747 ORTHO05D007159 4.2e-16 88.2 80 60.0
AUR62004704 Chenopodium quinoa HOM05D005747 ORTHO05D007159 5.5e-16 87.8 95 53.7
AUR62023620 Chenopodium quinoa HOM05D005747 ORTHO05D007159 9.3e-16 87.0 118 46.6
Dinv35784 Davidia involucrata HOM05D005747 ORTHO05D007159 5.6e-13 77.8 50 78.0
MCO03G507 Micromonas commoda HOM05D005747 ORTHO05D007159 1.4e-11 73.2 84 42.9
Lalb_Chr25g0289001 Lupinus albus HOM05D005747 ORTHO05D007159 2.9e-09 65.5 45 75.6
COL.COLO4_26972 Corchorus olitorius HOM05D005747 ORTHO05D007159 1.1e-08 63.5 45 66.7


User provided reference genes

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