Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g061740 Medicago truncatula HOM05D000167 ORTHO05D263193 4.7e-38 160.6 76 100.0
Medtr4g114260 Medicago truncatula HOM05D000167 ORTHO05D266000 4.7e-38 160.6 76 100.0
Medtr2g008225 Medicago truncatula HOM05D000167 ORTHO05D000465 2.4e-26 121.7 66 87.9
TPR.G19752 Trifolium pratense HOM05D000167 ORTHO05D000465 1.3e-19 99.4 66 72.7
Medtr2g008220 Medicago truncatula HOM05D000167 ORTHO05D000465 3.7e-19 97.8 66 71.2
Psat1g218280 Pisum sativum HOM05D000167 ORTHO05D000465 1.1e-18 96.3 66 69.7
Ca_00117_v3 Cicer arietinum L. HOM05D000167 ORTHO05D000465 7.8e-17 90.1 61 68.9
Medtr4g077960 Medicago truncatula HOM05D000167 ORTHO05D000465 3.0e-16 88.2 68 60.3
Lj6g0005498 Lotus japonicus HOM05D000167 ORTHO05D000465 1.9e-15 85.5 66 63.6
Phvul.006G208300 Phaseolus vulgaris HOM05D000167 ORTHO05D000465 4.3e-15 84.3 64 62.5
Glyma.10G104700 Glycine max HOM05D000167 ORTHO05D000465 2.1e-14 82.0 64 60.9
Medtr6g036650 Medicago truncatula HOM05D000167 ORTHO05D000465 2.1e-14 82.0 64 64.1
Lj6g0000750 Lotus japonicus HOM05D000167 ORTHO05D000465 4.7e-14 80.9 66 59.1
Medtr4g123553 Medicago truncatula HOM05D000167 ORTHO05D000465 1.1e-13 79.7 68 58.8
VMungo0540G0275 Vigna mungo HOM05D000167 ORTHO05D000465 1.1e-13 79.7 64 57.8
Medtr3g435310 Medicago truncatula HOM05D000167 ORTHO05D000465 1.4e-13 79.3 68 60.3
Lalb_Chr20g0123141 Lupinus albus HOM05D000167 ORTHO05D000465 2.4e-13 78.6 64 59.4
Medtr2g046620 Medicago truncatula HOM05D000167 ORTHO05D000465 2.4e-13 78.6 69 52.2
VMungo0540G1465 Vigna mungo HOM05D000167 ORTHO05D000465 6.8e-13 77.0 64 57.8
Phvul.006G208500 Phaseolus vulgaris HOM05D000167 ORTHO05D000465 5.8e-12 73.9 64 56.2
arahy.Tifrunner.gnm1.ann1.AX22IR Arachis hypogaea HOM05D000167 ORTHO05D000465 1.3e-11 72.8 64 54.7
Glyma.08G181000 Glycine max HOM05D000167 ORTHO05D000465 2.2e-11 72.0 64 54.7
Lj6g0024693 Lotus japonicus HOM05D000167 ORTHO05D000465 2.2e-11 72.0 66 51.5
Glyma.15G051400 Glycine max HOM05D000167 ORTHO05D000465 3.8e-11 71.2 66 50.0
Phvul.006G208400 Phaseolus vulgaris HOM05D000167 ORTHO05D000465 1.9e-10 68.9 66 50.0
arahy.Tifrunner.gnm1.ann1.9RF0MR Arachis hypogaea HOM05D000167 ORTHO05D000465 2.4e-10 68.6 64 51.6
Medtr2g008226 Medicago truncatula HOM05D000167 ORTHO05D000465 2.4e-10 68.6 68 51.5
TPR.G19737 Trifolium pratense HOM05D000167 ORTHO05D000465 7.1e-10 67.0 68 50.0
Medtr6g042310 Medicago truncatula HOM05D000167 ORTHO05D000465 2.1e-09 65.5 68 50.0
Psat1g218320 Pisum sativum HOM05D000167 ORTHO05D000465 2.7e-09 65.1 67 49.3
Ca_00116_v3 Cicer arietinum L. HOM05D000167 ORTHO05D000465 6.0e-09 63.9 65 44.6
Lj2A529T42 Lonicera japonica HOM05D000167 ORTHO05D000465 1.0e-08 63.2 61 47.5
Haze_03889 Corylus avellana HOM05D000167 ORTHO05D000465 1.3e-08 62.8 66 42.4
Actinidia06507 Actinidia chinensis HOM05D001154 ORTHO05D001175 1.7e-08 62.4 66 40.9
VMungo0540G1468 Vigna mungo HOM05D000167 ORTHO05D000465 1.7e-08 62.4 66 43.9
Hma1.2p1_0802F.1_g220620 Hydrangea macrophylla HOM05D000167 ORTHO05D000465 3.9e-08 61.2 59 47.5
Lj2A530T44 Lonicera japonica HOM05D000167 ORTHO05D000465 3.9e-08 61.2 61 47.5
Rhsim10G0173800 Rhododendron simsii HOM05D000167 ORTHO05D000465 3.9e-08 61.2 66 40.9
Lj2A528T18 Lonicera japonica HOM05D000167 ORTHO05D000465 5.1e-08 60.8 61 45.9
Lj2A530T43 Lonicera japonica HOM05D000167 ORTHO05D000465 5.1e-08 60.8 61 45.9
AL8G23620 Arabidopsis lyrata HOM05D000167 ORTHO05D000465 6.6e-08 60.5 71 39.4
Dinv36950 Davidia involucrata HOM05D000167 ORTHO05D000465 6.6e-08 60.5 59 45.8
Lj2C530T4 Lonicera japonica HOM05D000167 ORTHO05D000465 6.6e-08 60.5 64 43.8
Rhsim10G0174000 Rhododendron simsii HOM05D000167 ORTHO05D000465 6.6e-08 60.5 66 39.4
Haze_03891 Corylus avellana HOM05D000167 ORTHO05D000465 1.1e-07 59.7 65 41.5
Dinv00225 Davidia involucrata HOM05D000167 ORTHO05D000465 1.5e-07 59.3 59 44.1
Dinv36947 Davidia involucrata HOM05D000167 ORTHO05D000465 1.5e-07 59.3 66 40.9
Dinv36948 Davidia involucrata HOM05D000167 ORTHO05D000465 1.5e-07 59.3 66 40.9
Dinv36949 Davidia involucrata HOM05D000167 ORTHO05D000465 1.5e-07 59.3 59 44.1
Prupe.6G203800 Prunus persica HOM05D000167 ORTHO05D000465 1.5e-07 59.3 66 40.9
Prupe.6G203900 Prunus persica HOM05D000167 ORTHO05D000465 1.5e-07 59.3 66 40.9
TWI77G0932 Tripterygium wilfordii HOM05D000167 ORTHO05D000465 1.5e-07 59.3 66 40.9
Lj2C529T0 Lonicera japonica HOM05D000167 ORTHO05D000465 1.9e-07 58.9 64 43.8
TWI77G0915 Tripterygium wilfordii HOM05D000167 ORTHO05D000465 1.9e-07 58.9 66 42.4
vmacro13019 Vaccinium macrocarpon HOM05D000167 ORTHO05D000465 1.9e-07 58.9 66 40.9
BcaB03g13708 Brassica carinata HOM05D000167 ORTHO05D000465 2.5e-07 58.5 66 39.4
BcaC05g27818 Brassica carinata HOM05D000167 ORTHO05D000465 2.5e-07 58.5 66 40.9
C05p38180 Brassica napus HOM05D000167 ORTHO05D000465 2.5e-07 58.5 66 40.9
BolC5t32545H Brassica oleracea HOM05D000167 ORTHO05D000465 2.5e-07 58.5 66 40.9
CSS0038385 Camellia sinensis var. sinensis HOM05D000167 ORTHO05D000465 2.5e-07 58.5 65 41.5
CSS0022796 Camellia sinensis var. sinensis HOM05D000167 ORTHO05D000465 3.3e-07 58.2 66 40.9
Dinv13570 Davidia involucrata HOM05D000167 ORTHO05D000465 3.3e-07 58.2 59 45.8
Carub.0008s0957 Capsella rubella HOM05D000167 ORTHO05D000465 4.3e-07 57.8 71 39.4
AT5G49690 Arabidopsis thaliana HOM05D000167 ORTHO05D000465 5.6e-07 57.4 71 38.0
CSS0009642 Camellia sinensis var. sinensis HOM05D000167 ORTHO05D000465 5.6e-07 57.4 66 40.9
Eucgr.H02443 Eucalyptus grandis HOM05D000167 ORTHO05D000465 5.6e-07 57.4 64 39.1
Lj2A527T46 Lonicera japonica HOM05D000167 ORTHO05D000465 5.6e-07 57.4 61 45.9
Lj2A529T43 Lonicera japonica HOM05D000167 ORTHO05D000465 5.6e-07 57.4 61 45.9
Rhsim08G0017600 Rhododendron simsii HOM05D000167 ORTHO05D000465 7.3e-07 57.0 61 41.0
HanXRQChr12g0369001 Helianthus annuus HOM05D000167 ORTHO05D000465 9.6e-07 56.6 65 40.0
vmacro13018 Vaccinium macrocarpon HOM05D000167 ORTHO05D000465 9.6e-07 56.6 65 40.0
FAN28G1396 Fragaria x ananassa HOM05D000167 ORTHO05D000465 1.2e-06 56.2 66 37.9
THA.LOC104810681 Tarenaya hassleriana HOM05D000167 ORTHO05D000465 1.2e-06 56.2 66 37.9
CSS0030653 Camellia sinensis var. sinensis HOM05D000167 ORTHO05D000465 1.6e-06 55.8 66 37.9
FvH4_1g12660 Fragaria vesca HOM05D000167 ORTHO05D000465 1.6e-06 55.8 66 37.9
FAN19G0630 Fragaria x ananassa HOM05D000167 ORTHO05D000465 1.6e-06 55.8 66 37.9
Peaxi162Scf00085g00166 Petunia axillaris HOM05D000167 ORTHO05D000465 1.6e-06 55.8 58 37.9
Rhsim08G0017700 Rhododendron simsii HOM05D000167 ORTHO05D000465 1.6e-06 55.8 62 40.3
TWI74G0954 Tripterygium wilfordii HOM05D000167 ORTHO05D000465 1.6e-06 55.8 66 40.9
vmacro18544 Vaccinium macrocarpon HOM05D000167 ORTHO05D000465 1.6e-06 55.8 62 43.5
Actinidia19247 Actinidia chinensis HOM05D000167 ORTHO05D000465 2.1e-06 55.5 67 43.3
CSS0046455 Camellia sinensis var. sinensis HOM05D000167 ORTHO05D000465 2.1e-06 55.5 65 38.5
Lju188C7T6 Lonicera japonica HOM05D000167 ORTHO05D000465 2.1e-06 55.5 68 38.2
QL06p035957 Quercus lobata HOM05D000167 ORTHO05D000465 2.1e-06 55.5 67 38.8
CSS0022064 Camellia sinensis var. sinensis HOM05D000167 ORTHO05D000465 2.8e-06 55.1 65 38.5
ECA236G2097 Erigeron canadensis HOM05D000167 ORTHO05D000465 2.8e-06 55.1 61 41.0
ClCG11G014690 Citrullus lanatus HOM05D000167 ORTHO05D000465 3.6e-06 54.7 61 37.7
DCAR_021393 Daucus carota HOM05D000167 ORTHO05D000465 3.6e-06 54.7 62 37.1
RcHm_v2.0_Chr2g0110761 Rosa chinensis HOM05D000167 ORTHO05D000465 3.6e-06 54.7 66 39.4
Cfa004942 Carpinus fangiana HOM05D000167 ORTHO05D000465 4.7e-06 54.3 67 37.3
CiPaw.08G141300 Carya illinoinensis HOM05D000167 ORTHO05D000465 4.7e-06 54.3 66 36.4
CiPaw.08G141400 Carya illinoinensis HOM05D000167 ORTHO05D000465 4.7e-06 54.3 66 36.4
DCAR_015281 Daucus carota HOM05D000167 ORTHO05D000465 4.7e-06 54.3 61 42.6
FAN28G2584 Fragaria x ananassa HOM05D000167 ORTHO05D000465 4.7e-06 54.3 66 36.4
BcaB01g01542 Brassica carinata HOM05D000167 ORTHO05D000465 6.2e-06 53.9 66 37.9
Cfa006869 Carpinus fangiana HOM05D000167 ORTHO05D000465 6.2e-06 53.9 66 40.9
CiPaw.08G141100 Carya illinoinensis HOM05D000167 ORTHO05D000465 6.2e-06 53.9 66 36.4
MELO3C003508.2 Cucumis melo HOM05D000167 ORTHO05D000465 6.2e-06 53.9 61 36.1
FvH4_1g19390 Fragaria vesca HOM05D000167 ORTHO05D000465 6.2e-06 53.9 66 37.9
FvH4_5g34510 Fragaria vesca HOM05D000167 ORTHO05D000465 6.2e-06 53.9 73 35.6
FAN13G2628 Fragaria x ananassa HOM05D000167 ORTHO05D000465 6.2e-06 53.9 73 34.2
FAN18G3970 Fragaria x ananassa HOM05D000167 ORTHO05D000465 6.2e-06 53.9 73 35.6
Lj2P543T6 Lonicera japonica HOM05D000167 ORTHO05D000465 6.2e-06 53.9 63 39.7
Lju188C6G5 Lonicera japonica HOM05D000167 ORTHO05D000465 6.2e-06 53.9 68 36.8
RcHm_v2.0_Chr2g0110741 Rosa chinensis HOM05D000167 ORTHO05D000465 6.2e-06 53.9 66 37.9
RcHm_v2.0_Chr2g0110831 Rosa chinensis HOM05D000167 ORTHO05D000465 6.2e-06 53.9 66 37.9
GSVIVG01003958001 Vitis vinifera HOM05D000167 ORTHO05D000465 6.2e-06 53.9 70 42.9
Atru.chr3.1223 Acer truncatum HOM05D000167 ORTHO05D000465 8.1e-06 53.5 62 40.3
A05p24480 Brassica napus HOM05D000167 ORTHO05D000465 8.1e-06 53.5 66 37.9
BraA05t21338Z Brassica rapa HOM05D000167 ORTHO05D000465 8.1e-06 53.5 66 37.9
CiPaw.08G141200 Carya illinoinensis HOM05D000167 ORTHO05D000465 8.1e-06 53.5 66 36.4
CiPaw.08G142000 Carya illinoinensis HOM05D000167 ORTHO05D000465 8.1e-06 53.5 66 36.4
CsaV3_3G048090 Cucumis sativus L. HOM05D000167 ORTHO05D000465 8.1e-06 53.5 61 36.1
Prupe.6G204000 Prunus persica HOM05D000167 ORTHO05D000465 8.1e-06 53.5 66 34.8
vmacro18545 Vaccinium macrocarpon HOM05D000167 ORTHO05D000465 8.1e-06 53.5 61 39.3
GSVIVG01003959001 Vitis vinifera HOM05D000167 ORTHO05D000465 8.1e-06 53.5 70 42.9


User provided reference genes

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