Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g059790 Medicago truncatula HOM05D005118 ORTHO05D006038 1.7e-196 689.1 330 100.0
Medtr8g095460 Medicago truncatula HOM05D005118 ORTHO05D006038 1.9e-184 649.0 331 95.2
TPR.G2549 Trifolium pratense HOM05D005118 ORTHO05D006038 2.4e-171 605.5 330 88.2
Psat6g079520 Pisum sativum HOM05D005118 ORTHO05D006038 1.2e-170 603.2 318 91.2
Ca_00895_v3 Cicer arietinum L. HOM05D005118 ORTHO05D006038 3.4e-165 585.1 331 85.8
Lj5g0005733 Lotus japonicus HOM05D005118 ORTHO05D006038 7.0e-155 550.8 331 81.3
Lalb_Chr10g0096391 Lupinus albus HOM05D005118 ORTHO05D006038 1.0e-150 537.0 329 79.3
Glyma.13G154600 Glycine max HOM05D005118 ORTHO05D006038 3.3e-144 515.4 319 78.4
arahy.Tifrunner.gnm1.ann1.72V09J Arachis hypogaea HOM05D005118 ORTHO05D006038 1.4e-142 510.0 319 76.5
arahy.Tifrunner.gnm1.ann1.W1QNQS Arachis hypogaea HOM05D005118 ORTHO05D006038 1.4e-142 510.0 319 76.5
VMungo1309G0892 Vigna mungo HOM05D005118 ORTHO05D006038 2.3e-142 509.2 329 75.1
Phvul.007G152100 Phaseolus vulgaris HOM05D005118 ORTHO05D006038 2.4e-139 499.2 330 75.5
Lj6g0000791 Lotus japonicus HOM05D005118 ORTHO05D006038 5.4e-139 498.0 310 77.7
Lj6g0018590 Lotus japonicus HOM05D005118 ORTHO05D006038 5.4e-139 498.0 310 77.7
Lj6g0005905 Lotus japonicus HOM05D005118 ORTHO05D006038 3.4e-133 478.8 331 72.5
GSVIVG01016776001 Vitis vinifera HOM05D005118 ORTHO05D006038 2.7e-122 442.6 312 68.6
CiPaw.09G015400 Carya illinoinensis HOM05D005118 ORTHO05D006038 5.8e-117 424.9 312 65.4
Gohir.D01G195000 Gossypium hirsutum HOM05D005118 ORTHO05D006038 8.4e-116 421.0 313 63.6
Prupe.7G104300 Prunus persica HOM05D005118 ORTHO05D006038 8.4e-116 421.0 315 65.4
Gorai.002G239100 Gossypium raimondii HOM05D005118 ORTHO05D006038 1.1e-115 420.6 311 63.7
Gohir.A01G205500 Gossypium hirsutum HOM05D005118 ORTHO05D006038 3.2e-115 419.1 310 63.2
COL.COLO4_29702 Corchorus olitorius HOM05D005118 ORTHO05D006038 1.7e-113 413.3 311 62.7
Atru.chr8.1769 Acer truncatum HOM05D005118 ORTHO05D006038 3.0e-113 412.5 319 63.3
QL05p009399 Quercus lobata HOM05D005118 ORTHO05D006038 5.1e-113 411.8 330 62.1
Thecc.05G091100 Theobroma cacao HOM05D005118 ORTHO05D006038 1.9e-112 409.8 311 62.7
MD12G1027200 Malus domestica HOM05D005118 ORTHO05D006038 5.6e-112 408.3 314 64.6
Ciclev10011946m.g Citrus clementina HOM05D005118 ORTHO05D006038 2.4e-110 402.9 341 59.2
FvH4_6g19140 Fragaria vesca HOM05D005118 ORTHO05D006038 8.4e-108 394.4 315 64.1
RcHm_v2.0_Chr3g0474251 Rosa chinensis HOM05D005118 ORTHO05D006038 1.1e-107 394.0 314 63.4
FAN09G1525 Fragaria x ananassa HOM05D005118 ORTHO05D006038 2.4e-107 392.9 317 63.4
FAN14G1754 Fragaria x ananassa HOM05D005118 ORTHO05D006038 9.3e-107 391.0 315 63.8
Nn2g14484 Nelumbo nucifera HOM05D005118 ORTHO05D006038 9.3e-107 391.0 310 60.3
TWI77G0553 Tripterygium wilfordii HOM05D005118 ORTHO05D006038 2.1e-106 389.8 313 61.3
FAN02G2546 Fragaria x ananassa HOM05D005118 ORTHO05D006038 4.6e-106 388.7 317 62.8
Atru.chr8.1478 Acer truncatum HOM05D005118 ORTHO05D006038 2.3e-105 386.3 304 61.8
Rhsim03G0072700 Rhododendron simsii HOM05D005118 ORTHO05D006038 3.0e-105 386.0 311 59.8
FAN05G3536 Fragaria x ananassa HOM05D005118 ORTHO05D006038 5.1e-105 385.2 309 63.8
CSS0000835 Camellia sinensis var. sinensis HOM05D005118 ORTHO05D006038 8.7e-105 384.4 287 64.8
TAR365G0960 Trochodendron aralioides HOM05D005118 ORTHO05D006038 9.6e-104 380.9 316 59.8
Oeu056875.2 Olea europaea HOM05D005118 ORTHO05D006038 1.6e-103 380.2 313 59.1
Sabra06G0162900 Salix brachista HOM05D005118 ORTHO05D006038 1.6e-103 380.2 307 59.9
SalBow3G3316 Salvia bowleyana HOM05D005118 ORTHO05D006038 1.6e-103 380.2 311 59.8
Migut.J01020 Erythranthe guttata HOM05D005118 ORTHO05D006038 8.1e-103 377.9 317 58.0
Eucgr.A02654 Eucalyptus grandis HOM05D005118 ORTHO05D006038 9.0e-102 374.4 312 59.6
TWI53G1403 Tripterygium wilfordii HOM05D005118 ORTHO05D006038 2.6e-101 372.9 275 64.7
PSO782G2273 Papaver somniferum HOM05D005118 ORTHO05D006038 3.8e-100 369.0 315 56.5
ClCG08G004490 Citrullus lanatus HOM05D005118 ORTHO05D006038 2.5e-99 366.3 312 56.7
CANSAT64G1535 Cannabis sativa HOM05D005118 ORTHO05D006038 9.3e-99 364.4 298 60.7
PSO063G5626 Papaver somniferum HOM05D005118 ORTHO05D006038 1.2e-98 364.0 315 56.8
CsaV3_6G003860 Cucumis sativus L. HOM05D005118 ORTHO05D006038 2.1e-98 363.2 314 56.7
Sopen09g004710 Solanum pennellii HOM05D005118 ORTHO05D006038 4.6e-98 362.1 308 56.8
Solyc09g009960.3 Solanum lycopersicum HOM05D005118 ORTHO05D006038 6.0e-98 361.7 308 57.1
Nitab4.5_0001933g0040 Nicotiana tabacum HOM05D005118 ORTHO05D006038 7.9e-98 361.3 317 56.2
Peaxi162Scf00102g00213 Petunia axillaris HOM05D005118 ORTHO05D006038 1.8e-97 360.1 311 56.3
MELO3C011647.2 Cucumis melo HOM05D005118 ORTHO05D006038 3.9e-97 359.0 312 55.8
Sed0011362 Sechium edule HOM05D005118 ORTHO05D006038 2.5e-96 356.3 311 55.6
Oeu017686.1 Olea europaea HOM05D005118 ORTHO05D006038 5.7e-96 355.1 318 56.3
Sc02g0000340 Simmondsia chinensis HOM05D005118 ORTHO05D006038 1.6e-95 353.6 315 56.8
AUR62006198 Chenopodium quinoa HOM05D005118 ORTHO05D006038 2.1e-95 353.2 311 55.6
MBI14_g17373_MAGBIO Magnolia biondii HOM05D005118 ORTHO05D006038 8.2e-95 351.3 295 58.6
vmacro07419 Vaccinium macrocarpon HOM05D005118 ORTHO05D006038 2.4e-94 349.7 341 53.7
Sp3g09700 Schrenkiella parvula HOM05D005118 ORTHO05D006038 6.9e-94 348.2 283 59.0
Aqoxy3G03420 Aquilegia oxysepala HOM05D005118 ORTHO05D006038 2.6e-93 346.3 303 57.4
DCAR_013399 Daucus carota HOM05D005118 ORTHO05D006038 7.6e-93 344.7 320 55.0
C05p56660 Brassica napus HOM05D005118 ORTHO05D006038 2.2e-92 343.2 283 58.0
BolC5t34331H Brassica oleracea HOM05D005118 ORTHO05D006038 2.2e-92 343.2 283 58.0
CAN.G397.66 Capsicum annuum HOM05D005118 ORTHO05D006038 9.3e-91 337.8 298 55.7
A05p37870 Brassica napus HOM05D005118 ORTHO05D006038 1.2e-90 337.4 283 58.0
Rhsim03G0074200 Rhododendron simsii HOM05D005118 ORTHO05D006038 1.2e-90 337.4 311 54.3
EL10Ac7g16902 Beta vulgaris HOM05D001354 ORTHO05D007486 2.1e-90 336.7 318 55.0
BraA05t22581Z Brassica rapa HOM05D005118 ORTHO05D006038 3.5e-90 335.9 283 58.3
HanXRQChr08g0212801 Helianthus annuus HOM05D005118 ORTHO05D006038 4.6e-90 335.5 301 55.1
THA.LOC104816589 Tarenaya hassleriana HOM05D005118 ORTHO05D006038 1.0e-89 334.3 285 58.9
BcaB06g25621 Brassica carinata HOM05D005118 ORTHO05D006038 1.3e-89 334.0 283 58.7
Sabra16G0082800 Salix brachista HOM05D005118 ORTHO05D006038 1.3e-89 334.0 371 48.8
Aa31LG3G4830 Aethionema arabicum HOM05D005118 ORTHO05D006038 3.9e-89 332.4 274 57.7
CARHR145210 Cardamine hirsuta HOM05D005118 ORTHO05D006038 6.7e-89 331.6 283 57.2
AL3G23010 Arabidopsis lyrata HOM05D005118 ORTHO05D006038 4.3e-88 328.9 283 56.2
Carub.0005s0168 Capsella rubella HOM05D005118 ORTHO05D006038 2.2e-87 326.6 283 56.5
ECA247G3083 Erigeron canadensis HOM05D005118 ORTHO05D006038 3.1e-86 322.8 283 56.2
Thhalv10018973m.g Eutrema salsugineum HOM05D005118 ORTHO05D006038 3.1e-86 322.8 284 58.1
Aa31LG3G4790 Aethionema arabicum HOM05D005118 ORTHO05D006038 9.0e-86 321.2 278 55.8
Dinv21195 Davidia involucrata HOM05D005118 ORTHO05D006038 9.0e-86 321.2 249 64.7
AT3G11470 Arabidopsis thaliana HOM05D005118 ORTHO05D006038 5.9e-85 318.5 268 57.5
BcaC05g29371 Brassica carinata HOM05D005118 ORTHO05D006038 5.9e-85 318.5 283 55.8
Haze_12101 Corylus avellana HOM05D005118 ORTHO05D006038 1.3e-84 317.4 282 56.4
HPP92_018124 Vanilla planifolia HOM05D005118 ORTHO05D006038 5.0e-84 315.5 300 53.0
ATR0618G287 Amborella trichopoda HOM05D005118 ORTHO05D006038 1.9e-83 313.5 281 56.6
Lsat_1_v5_gn_9_20681 Lactuca sativa HOM05D005118 ORTHO05D006038 2.1e-82 310.1 277 55.6
unitig_748.g8118 Utricularia gibba HOM05D005118 ORTHO05D006038 4.6e-82 308.9 299 49.5
PGR004G0063 Punica granatum HOM05D005118 ORTHO05D006038 1.8e-81 307.0 312 52.9
Duzib093G2169 Durio zibethinus HOM05D005118 ORTHO05D006038 2.3e-81 306.6 225 63.1
Zm00001eb000710 Zea mays HOM05D005118 ORTHO05D006038 2.3e-81 306.6 292 51.4
AUR62037021 Chenopodium quinoa HOM05D005118 ORTHO05D006038 5.1e-81 305.4 275 54.9
Nitab4.5_0012129g0010 Nicotiana tabacum HOM05D005118 ORTHO05D006038 4.3e-80 302.4 311 50.8
Os08g0243100 Oryza sativa ssp. japonica HOM05D005118 ORTHO05D006038 4.3e-80 302.4 291 50.9
Lj2C139G10 Lonicera japonica HOM05D005118 ORTHO05D006038 5.7e-80 302.0 225 62.7
Thhalv10021266m.g Eutrema salsugineum HOM05D005118 ORTHO05D006038 1.5e-77 293.9 298 52.0
Potri.006G211300 Populus trichocarpa HOM05D005118 ORTHO05D006038 8.5e-76 288.1 225 62.2
Hund01804 Selenicereus undatus HOM05D005118 ORTHO05D006038 1.1e-75 287.7 314 48.4
Sp3g13570 Schrenkiella parvula HOM05D005118 ORTHO05D006038 4.2e-75 285.8 288 52.8
Manes.08G026600 Manihot esculenta HOM05D005118 ORTHO05D006038 1.2e-74 284.3 311 48.2
AUR62017509 Chenopodium quinoa HOM05D005118 ORTHO05D006038 1.6e-74 283.9 311 47.6
Peaxi162Scf00096g00416 Petunia axillaris HOM05D005118 ORTHO05D006038 2.7e-74 283.1 285 50.9
VMungo0720G2492 Vigna mungo HOM05D005118 ORTHO05D006038 2.3e-73 280.0 183 72.1
BolC5t33871H Brassica oleracea HOM05D005118 ORTHO05D006038 4.4e-72 275.8 289 51.2
SGA_v2.0_scaffold31G12903 Striga asiatica HOM05D005118 ORTHO05D006038 2.8e-71 273.1 227 55.5
AT2G02765 Arabidopsis thaliana HOM05D005118 ORTHO05D006038 6.3e-71 271.9 210 60.5
Cc06_g05990 Coffea canephora HOM05D005118 ORTHO05D006038 6.3e-71 271.9 223 58.3
Dinv21192 Davidia involucrata HOM05D005118 ORTHO05D006038 1.5e-69 267.3 241 58.5
Rhsim03G0072000 Rhododendron simsii HOM05D005118 ORTHO05D006038 8.5e-68 261.5 223 58.7
C05p51840 Brassica napus HOM05D005118 ORTHO05D006038 1.0e-65 254.6 288 48.6
VMungo0720G0644 Vigna mungo HOM05D005118 ORTHO05D006038 8.8e-65 251.5 155 78.7
Ah.08g210500 Amaranthus hybridus HOM05D000892 ORTHO05D009371 2.6e-64 250.0 288 46.9
SEGI_18237 Sequoiadendron giganteum HOM05D005118 ORTHO05D006038 7.4e-64 248.4 319 42.9
BraA05t22230Z Brassica rapa HOM05D005118 ORTHO05D006038 6.8e-57 225.3 187 59.9
HPP92_018147 Vanilla planifolia HOM05D005118 ORTHO05D006038 1.2e-56 224.6 217 50.2
AL5G11970 Arabidopsis lyrata HOM05D005118 ORTHO05D006038 3.7e-55 219.5 231 48.9
BcaB06g29561 Brassica carinata HOM05D005118 ORTHO05D006038 6.3e-55 218.8 290 44.5
TPR.G14778 Trifolium pratense HOM05D005118 ORTHO05D006038 6.3e-55 218.8 127 82.7
Potri.016G078400 Populus trichocarpa HOM05D005118 ORTHO05D006038 1.2e-53 214.5 177 60.5
AagrBONN_evm.TU.Sc2ySwM_340.158 Anthoceros agrestis HOM05D005118 ORTHO05D006038 1.9e-51 207.2 310 40.3
Mapoly0006s0252 Marchantia polymorpha HOM05D005118 ORTHO05D006038 3.2e-51 206.5 288 39.9
Pp3c5_18920 Physcomitrium patens HOM05D005118 ORTHO05D006038 1.6e-50 204.1 308 36.4
Cpa.g.sc5.3 Carica papaya HOM05D005118 ORTHO05D006038 5.7e-48 195.7 161 60.2
MD14G1027400 Malus domestica HOM05D005118 ORTHO05D006038 7.0e-46 188.7 172 57.6
Sabra06G0126100 Salix brachista HOM05D005118 ORTHO05D006038 2.5e-43 180.3 215 48.4
SMO144G0078 Selaginella moellendorffii HOM05D005118 ORTHO05D006038 1.4e-41 174.5 281 37.7
Glyma.10G074300 Glycine max HOM05D005118 ORTHO05D006038 2.3e-41 173.7 118 72.0
BcaC05g28982 Brassica carinata HOM05D005118 ORTHO05D006038 2.6e-40 170.2 254 41.7
FvH4_4g11630 Fragaria vesca HOM05D005118 ORTHO05D006038 2.6e-40 170.2 228 46.5
SMO118G0036 Selaginella moellendorffii HOM05D005118 ORTHO05D006038 9.8e-40 168.3 284 36.6
PGSC0003DMG402008870 Solanum tuberosum HOM05D005118 ORTHO05D006038 8.3e-39 165.2 140 57.1
FAN12G1659 Fragaria x ananassa HOM05D005118 ORTHO05D006038 1.0e-33 148.3 107 68.2
A05p34090 Brassica napus HOM05D005118 ORTHO05D006038 8.9e-25 118.6 173 36.4
CDE02G4411 Ceratophyllum demersum HOM05D000588 ORTHO05D000637 8.3e-23 112.1 116 49.1
PRCOL_00003909 Prasinoderma coloniale HOM05D005118 ORTHO05D006038 8.3e-23 112.1 183 37.2
MCO02G431 Micromonas commoda HOM05D005118 ORTHO05D006038 5.6e-19 99.4 350 25.7
Carub.0003s1079 Capsella rubella HOM05D005118 ORTHO05D006038 4.0e-17 93.2 100 47.0
SEGI_32763 Sequoiadendron giganteum HOM05D005118 ORTHO05D006038 8.9e-17 92.0 108 45.4
CARHR086010 Cardamine hirsuta HOM05D005118 ORTHO05D006038 1.5e-16 91.3 108 44.4
Ah.16g107780 Amaranthus hybridus HOM05D005118 ORTHO05D006038 1.9e-14 84.3 88 46.6
AUR62015050 Chenopodium quinoa HOM05D005118 ORTHO05D006038 3.2e-14 83.6 289 26.6
BcaB06g25617 Brassica carinata HOM05D005118 ORTHO05D006038 1.2e-13 81.6 61 63.9
BcaB06g25618 Brassica carinata HOM05D005118 ORTHO05D006038 1.2e-13 81.6 61 63.9
CBR_g30340 Chara braunii HOM05D005118 ORTHO05D006038 1.3e-12 78.2 210 30.5
Lj2E139T0 Lonicera japonica HOM05D005118 ORTHO05D006038 3.9e-12 76.6 56 62.5
Eucgr.J00256 Eucalyptus grandis HOM05D007318 ORTHO05D009289 1.6e-10 71.2 255 27.5
Cre01.g018500 Chlamydomonas reinhardtii HOM05D005118 ORTHO05D006038 3.6e-10 70.1 165 30.9
Hund15021 Selenicereus undatus HOM05D005118 ORTHO05D006038 3.6e-10 70.1 59 55.9
Pp3c5_16220 Physcomitrium patens HOM05D007318 ORTHO05D009289 4.7e-10 69.7 164 29.3
Lj6g0015884 Lotus japonicus HOM05D007318 ORTHO05D009289 4.0e-09 66.6 274 24.8
Glyma.15G117500 Glycine max HOM05D007318 ORTHO05D009289 9.9e-08 62.0 159 27.7
VMungo0720G2068 Vigna mungo HOM05D007318 ORTHO05D009289 9.9e-08 62.0 251 23.9
Sabra10G0186800 Salix brachista HOM05D007318 ORTHO05D009289 3.8e-07 60.1 240 23.3
FAN22G2138 Fragaria x ananassa HOM05D005118 ORTHO05D006038 4.9e-07 59.7 56 53.6
SMO172G0015 Selaginella moellendorffii HOM05D007318 ORTHO05D009289 6.4e-07 59.3 141 31.9
Actinidia18618 Actinidia chinensis HOM05D007318 ORTHO05D009289 8.4e-07 58.9 176 27.3
arahy.Tifrunner.gnm1.ann1.CJJ3HV Arachis hypogaea HOM05D007318 ORTHO05D009289 8.4e-07 58.9 154 28.6
arahy.Tifrunner.gnm1.ann1.CYVU5X Arachis hypogaea HOM05D007318 ORTHO05D009289 8.4e-07 58.9 154 28.6
arahy.Tifrunner.gnm1.ann1.PPG341 Arachis hypogaea HOM05D007318 ORTHO05D009289 8.4e-07 58.9 154 28.6
PGR044G0176 Punica granatum HOM05D007318 ORTHO05D009289 1.1e-06 58.5 161 29.2
Lalb_Chr01g0010421 Lupinus albus HOM05D007318 ORTHO05D009289 2.4e-06 57.4 176 26.7
QL04p044887 Quercus lobata HOM05D007318 ORTHO05D009289 5.4e-06 56.2 229 25.3
CiPaw.14G032900 Carya illinoinensis HOM05D007318 ORTHO05D009289 7.1e-06 55.8 182 26.4


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