Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g058110 Medicago truncatula HOM05D008222 ORTHO05D010364 0.0e+00 1183.3 666 100.0
TPR.G8743 Trifolium pratense HOM05D008222 ORTHO05D010364 2.4e-223 779.2 681 65.5
Lj5g0010690 Lotus japonicus HOM05D008222 ORTHO05D010364 1.2e-164 584.3 691 61.9
Glyma.02G200000 Glycine max HOM05D008222 ORTHO05D010364 1.0e-160 571.2 691 53.7
Glyma.10G076700 Glycine max HOM05D008222 ORTHO05D010364 8.6e-144 515.0 691 53.1
VMungo0720G0042 Vigna mungo HOM05D008222 ORTHO05D010364 7.6e-124 448.7 686 49.4
Phvul.007G270200 Phaseolus vulgaris HOM05D008222 ORTHO05D010364 2.1e-121 440.7 687 49.2
QL07p037571 Quercus lobata HOM05D008222 ORTHO05D010364 6.1e-89 332.8 709 44.0
Cfa016663 Carpinus fangiana HOM05D008222 ORTHO05D010364 8.8e-88 328.9 701 40.7
Haze_19673 Corylus avellana HOM05D008222 ORTHO05D010364 7.4e-87 325.9 708 39.5
Dinv31739 Davidia involucrata HOM05D008222 ORTHO05D010364 4.5e-84 316.6 707 42.6
CiPaw.10G014900 Carya illinoinensis HOM05D008222 ORTHO05D010364 3.9e-80 303.5 707 40.9
Potri.006G205800 Populus trichocarpa HOM05D008222 ORTHO05D010364 2.6e-76 290.8 700 41.0
Ciclev10011213m.g Citrus clementina HOM05D008222 ORTHO05D010364 5.9e-76 289.7 706 39.2
Manes.09G049300 Manihot esculenta HOM05D008222 ORTHO05D010364 5.0e-75 286.6 700 37.1
GSVIVG01033924001 Vitis vinifera HOM05D008222 ORTHO05D010364 3.6e-73 280.4 705 36.6
TAR633G2678 Trochodendron aralioides HOM05D008222 ORTHO05D010364 4.7e-73 280.0 726 38.7
TAR636G2750 Trochodendron aralioides HOM05D008222 ORTHO05D010364 3.0e-72 277.3 704 39.3
Atru.chr8.1411 Acer truncatum HOM05D008222 ORTHO05D010364 5.2e-72 276.6 749 34.2
Sabra06G0158800 Salix brachista HOM05D008222 ORTHO05D010364 1.1e-71 275.4 692 40.9
COL.COLO4_29620 Corchorus olitorius HOM05D008222 ORTHO05D010364 4.4e-71 273.5 711 42.1
Thecc.05G099900 Theobroma cacao HOM05D008222 ORTHO05D010364 1.8e-69 268.1 707 35.1
TWI77G0950 Tripterygium wilfordii HOM05D008222 ORTHO05D010364 3.5e-68 263.8 719 35.5
Nn6g34773 Nelumbo nucifera HOM05D008222 ORTHO05D010364 1.0e-67 262.3 722 41.0
Cpa.g.sc104.69 Carica papaya HOM05D008222 ORTHO05D010364 8.5e-67 259.2 714 38.4
FAN05G0526 Fragaria x ananassa HOM05D008222 ORTHO05D010364 2.2e-62 244.6 685 39.6
FvH4_6g19810 Fragaria vesca HOM05D008222 ORTHO05D010364 2.8e-62 244.2 686 39.4
MBI17_g16777_MAGBIO Magnolia biondii HOM05D008222 ORTHO05D010364 2.8e-62 244.2 697 40.0
RcHm_v2.0_Chr3g0475181 Rosa chinensis HOM05D008222 ORTHO05D010364 6.3e-62 243.0 681 39.8
CANSAT64G2035 Cannabis sativa HOM05D008222 ORTHO05D010364 8.2e-62 242.7 747 32.9
Lj1C1035T2 Lonicera japonica HOM05D008222 ORTHO05D010364 5.3e-61 240.0 693 34.9
FAN14G0765 Fragaria x ananassa HOM05D008222 ORTHO05D010364 1.2e-60 238.8 686 39.1
FAN02G2041 Fragaria x ananassa HOM05D008222 ORTHO05D010364 2.0e-60 238.0 685 40.0
FAN05G0780 Fragaria x ananassa HOM05D008222 ORTHO05D010364 2.2e-59 234.6 685 39.7
CSS0016714 Camellia sinensis var. sinensis HOM05D008222 ORTHO05D010364 4.7e-57 226.9 732 37.2
FAN09G4126 Fragaria x ananassa HOM05D008222 ORTHO05D010364 1.3e-54 218.8 684 38.3
CiPaw.09G018200 Carya illinoinensis HOM05D008222 ORTHO05D010364 8.3e-54 216.1 579 37.5
Oeu060355.1 Olea europaea HOM05D008222 ORTHO05D010364 5.4e-53 213.4 715 33.1
Oeu010753.1 Olea europaea HOM05D008222 ORTHO05D010364 1.6e-52 211.8 697 29.8
DCAR_020725 Daucus carota HOM05D008222 ORTHO05D010364 2.7e-52 211.1 708 31.5
Oeu010756.1 Olea europaea HOM05D008222 ORTHO05D010364 3.3e-50 204.1 691 29.7
MSTRG.10386 Avicennia marina HOM05D008222 ORTHO05D010364 3.4e-47 194.1 692 30.1
MD12G1033800 Malus domestica HOM05D008222 ORTHO05D010364 7.5e-47 193.0 566 35.0
AUR62006264 Chenopodium quinoa HOM05D008222 ORTHO05D010364 6.6e-43 179.9 724 29.1
Hund03869 Selenicereus undatus HOM05D008222 ORTHO05D010364 9.5e-42 176.0 775 29.4
Sc20g0006580 Simmondsia chinensis HOM05D008222 ORTHO05D010364 3.1e-40 171.0 674 35.2
EL10Ac7g16820 Beta vulgaris HOM05D008222 ORTHO05D010364 2.0e-39 168.3 814 30.8
HPP92_009786 Vanilla planifolia HOM05D008222 ORTHO05D010364 2.4e-37 161.4 695 34.5
SGA_v2.0_scaffold184G40000 Striga asiatica HOM05D008222 ORTHO05D010364 1.9e-34 151.8 686 27.7
CDE06G1815 Ceratophyllum demersum HOM05D008222 ORTHO05D010364 4.3e-34 150.6 669 32.0
AUR62028514 Chenopodium quinoa HOM05D008222 ORTHO05D010364 1.6e-33 148.7 824 25.0
Lalb_Chr02g0154681 Lupinus albus HOM05D008222 ORTHO05D010364 4.7e-33 147.1 347 35.7
Psat6g082000 Pisum sativum HOM05D008222 ORTHO05D010364 4.7e-33 147.1 144 56.9
Aqoxy4G02694 Aquilegia oxysepala HOM05D008222 ORTHO05D010364 4.9e-30 137.1 728 31.0
Os02g0536400 Oryza sativa ssp. japonica HOM05D008222 ORTHO05D010364 1.3e-27 129.0 705 29.6
CDE08G0440 Ceratophyllum demersum HOM05D008222 ORTHO05D010364 2.3e-27 128.3 669 35.3
Oeu010754.1 Olea europaea HOM05D008222 ORTHO05D010364 1.8e-24 118.6 509 27.9
SEGI_05246 Sequoiadendron giganteum HOM05D008222 ORTHO05D010364 6.8e-24 116.7 772 30.4
ECA233G4923 Erigeron canadensis HOM05D008222 ORTHO05D010364 3.7e-22 110.9 292 31.2
ATR0772G019 Amborella trichopoda HOM05D008222 ORTHO05D010364 3.2e-21 107.8 730 30.4
unitig_8.g3557 Utricularia gibba HOM05D008222 ORTHO05D010364 4.4e-15 87.4 263 30.4
AagrBONN_evm.TU.Sc2ySwM_368.1895 Anthoceros agrestis HOM05D008222 ORTHO05D010364 2.3e-11 75.1 52 63.5


User provided reference genes

Program Settings