Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g056460 Medicago truncatula HOM05D005193 ORTHO05D006316 0.0e+00 1785.8 906 100.0
Psat6g078440 Pisum sativum HOM05D005193 ORTHO05D006316 0.0e+00 1545.0 914 86.1
Ca_11685_v3 Cicer arietinum L. HOM05D005193 ORTHO05D006316 0.0e+00 1541.9 914 85.6
TPR.G2822 Trifolium pratense HOM05D005193 ORTHO05D006316 0.0e+00 1426.4 913 81.9
Glyma.14G021300 Glycine max HOM05D005193 ORTHO05D006316 0.0e+00 1395.2 910 78.9
VMungo0647G2043 Vigna mungo HOM05D005193 ORTHO05D006316 0.0e+00 1382.5 916 78.4
LjContig00272g0004657 Lotus japonicus HOM05D005193 ORTHO05D006316 0.0e+00 1370.9 900 77.8
Phvul.008G270200 Phaseolus vulgaris HOM05D005193 ORTHO05D006316 0.0e+00 1369.4 902 78.6
arahy.Tifrunner.gnm1.ann1.K04HM7 Arachis hypogaea HOM05D005193 ORTHO05D006316 0.0e+00 1313.9 918 74.0
arahy.Tifrunner.gnm1.ann1.J5TE7C Arachis hypogaea HOM05D005193 ORTHO05D006316 0.0e+00 1262.7 918 71.9
QL08p009116 Quercus lobata HOM05D005193 ORTHO05D006316 0.0e+00 1128.2 909 64.6
CiPaw.11G192300 Carya illinoinensis HOM05D005193 ORTHO05D006316 3.3e-303 1045.0 907 61.2
Ciclev10007388m.g Citrus clementina HOM05D005193 ORTHO05D006316 2.1e-302 1042.3 922 59.2
MD03G1197400 Malus domestica HOM05D005193 ORTHO05D006316 8.9e-301 1036.9 914 59.8
Potri.001G356700 Populus trichocarpa HOM05D005193 ORTHO05D006316 3.7e-299 1031.6 910 59.5
Atru.chr2.3490 Acer truncatum HOM05D005193 ORTHO05D006316 3.9e-296 1021.5 878 60.6
Dinv40781 Davidia involucrata HOM05D005193 ORTHO05D006316 4.3e-295 1018.1 874 61.4
FAN11G0281 Fragaria x ananassa HOM05D005193 ORTHO05D006316 1.4e-293 1013.1 928 58.5
Gohir.D01G069100 Gossypium hirsutum HOM05D005193 ORTHO05D006316 3.1e-293 1011.9 928 57.4
Actinidia10743 Actinidia chinensis HOM05D005193 ORTHO05D006316 6.8e-293 1010.7 911 58.8
TAR627G0707 Trochodendron aralioides HOM05D005193 ORTHO05D006316 6.8e-293 1010.7 888 60.1
Gohir.A01G082500 Gossypium hirsutum HOM05D005193 ORTHO05D006316 1.4e-290 1003.0 925 57.2
Sabra16G0234700 Salix brachista HOM05D005193 ORTHO05D006316 1.9e-290 1002.7 926 56.6
Thecc.07G032100 Theobroma cacao HOM05D005193 ORTHO05D006316 7.0e-290 1000.7 915 58.6
RcHm_v2.0_Chr5g0040821 Rosa chinensis HOM05D005193 ORTHO05D006316 2.0e-289 999.2 912 58.3
RhsimUnG0248800 Rhododendron simsii HOM05D005193 ORTHO05D006316 1.7e-288 996.1 966 54.9
Gorai.002G091400 Gossypium raimondii HOM05D005193 ORTHO05D006316 3.9e-288 995.0 926 57.1
Duzib268G1225 Durio zibethinus HOM05D005193 ORTHO05D006316 6.6e-288 994.2 924 57.0
TWI38G1184 Tripterygium wilfordii HOM05D005193 ORTHO05D006316 1.5e-287 993.0 919 56.1
CANSAT11G2467 Cannabis sativa HOM05D005193 ORTHO05D006316 4.0e-285 984.9 914 57.1
Nn1g03454 Nelumbo nucifera HOM05D005193 ORTHO05D006316 1.7e-283 979.5 913 57.4
FAN21G2135 Fragaria x ananassa HOM05D005193 ORTHO05D006316 2.9e-283 978.8 912 57.2
FAN16G1885 Fragaria x ananassa HOM05D005193 ORTHO05D006316 1.1e-282 976.9 895 58.4
Prupe.4G218100 Prunus persica HOM05D005193 ORTHO05D006316 1.9e-282 976.1 855 60.0
Hma1.2p1_0036F.1_g023390 Hydrangea macrophylla HOM05D005193 ORTHO05D006316 7.8e-281 970.7 876 57.4
Haze_09711 Corylus avellana HOM05D005193 ORTHO05D006316 4.7e-278 961.4 897 57.0
COL.COLO4_09693 Corchorus olitorius HOM05D005193 ORTHO05D006316 1.2e-273 946.8 977 54.1
PSO210G7537 Papaver somniferum HOM05D005193 ORTHO05D006316 2.0e-268 929.5 913 53.1
PSO832G1529 Papaver somniferum HOM05D005193 ORTHO05D006316 1.1e-266 923.7 912 53.1
FAN25G0346 Fragaria x ananassa HOM05D005193 ORTHO05D006316 2.1e-262 909.4 993 52.5
MELO3C013149.2 Cucumis melo HOM05D005193 ORTHO05D006316 2.8e-262 909.1 910 53.7
Manes.15G068700 Manihot esculenta HOM05D005193 ORTHO05D006316 6.2e-262 907.9 781 59.9
CsaV3_7G021980 Cucumis sativus L. HOM05D005193 ORTHO05D006316 2.2e-259 899.4 910 52.9
Lsat_1_v5_gn_7_111080 Lactuca sativa HOM05D005193 ORTHO05D006316 4.6e-257 891.7 919 50.3
PGR031G1204 Punica granatum HOM05D005193 ORTHO05D006316 3.3e-255 885.6 909 52.0
Sopen12g001090 Solanum pennellii HOM05D005193 ORTHO05D006316 1.1e-250 870.5 915 50.4
Aqoxy4G01697 Aquilegia oxysepala HOM05D005193 ORTHO05D006316 3.2e-250 869.0 916 50.8
MBI07_g09089_MAGBIO Magnolia biondii HOM05D005193 ORTHO05D006316 5.5e-250 868.2 940 50.7
GSVIVG01037690001 Vitis vinifera HOM05D005193 ORTHO05D006316 1.3e-248 863.6 734 59.7
Aqoxy1G03394 Aquilegia oxysepala HOM05D005193 ORTHO05D006316 4.3e-247 858.6 934 50.2
ECA236G2682 Erigeron canadensis HOM05D005193 ORTHO05D006316 2.1e-246 856.3 911 48.7
HanXRQChr11g0335911 Helianthus annuus HOM05D005193 ORTHO05D006316 4.8e-246 855.1 873 49.9
Sed0015549 Sechium edule HOM05D005193 ORTHO05D006316 8.1e-246 854.4 905 51.7
FvH4_3g23170 Fragaria vesca HOM05D005193 ORTHO05D006316 1.8e-245 853.2 728 61.7
FAN25G2894 Fragaria x ananassa HOM05D005193 ORTHO05D006316 9.0e-245 850.9 939 51.5
Cc05_g14020 Coffea canephora HOM05D005193 ORTHO05D006316 1.2e-244 850.5 910 50.3
MSTRG.6941 Avicennia marina HOM05D005193 ORTHO05D006316 1.7e-243 846.7 916 49.2
Carub.0001s3976 Capsella rubella HOM05D005193 ORTHO05D006316 5.1e-240 835.1 898 49.7
Sp1g37570 Schrenkiella parvula HOM05D005193 ORTHO05D006316 2.5e-239 832.8 897 49.6
AT1G50730 Arabidopsis thaliana HOM05D005193 ORTHO05D006316 1.2e-236 823.9 899 49.4
Eucgr.F03483 Eucalyptus grandis HOM05D005193 ORTHO05D006316 4.5e-236 822.0 791 54.6
Migut.M01736 Erythranthe guttata HOM05D005193 ORTHO05D006316 6.5e-235 818.1 897 49.3
BraA06t23495Z Brassica rapa HOM05D005193 ORTHO05D006316 9.7e-231 804.3 907 48.6
BcaB07g33512 Brassica carinata HOM05D005193 ORTHO05D006316 9.0e-229 797.7 897 49.1
THA.LOC104816145 Tarenaya hassleriana HOM05D005193 ORTHO05D006316 5.9e-228 795.0 904 46.7
A06p02890 Brassica napus HOM05D005193 ORTHO05D006316 2.9e-227 792.7 908 48.3
BcaC08g43253 Brassica carinata HOM05D005193 ORTHO05D006316 1.1e-223 780.8 906 47.9
CARHR040830 Cardamine hirsuta HOM05D005193 ORTHO05D006316 2.9e-219 766.1 837 49.6
C06p05990 Brassica napus HOM05D005193 ORTHO05D006316 1.1e-218 764.2 911 47.3
Thhalv10011218m.g Eutrema salsugineum HOM05D005193 ORTHO05D006316 1.9e-218 763.5 919 47.0
Oeu041839.1 Olea europaea HOM05D005193 ORTHO05D006316 5.5e-218 761.9 736 52.7
Aa31LG10G3620 Aethionema arabicum HOM05D005193 ORTHO05D006316 9.4e-218 761.1 903 47.0
Ah.06g182590 Amaranthus hybridus HOM05D005193 ORTHO05D006316 3.6e-217 759.2 918 45.4
AUR62020399 Chenopodium quinoa HOM05D005193 ORTHO05D006316 9.7e-207 724.5 833 48.5
BolC6t35712H Brassica oleracea HOM05D005193 ORTHO05D006316 8.0e-201 704.9 941 44.7
AUR62015820 Chenopodium quinoa HOM05D005193 ORTHO05D006316 3.0e-200 703.0 900 45.8
Lalb_Chr17g0348621 Lupinus albus HOM05D005193 ORTHO05D006316 6.5e-195 685.3 492 71.7
ClCG09G010950 Citrullus lanatus HOM05D005193 ORTHO05D006316 4.4e-191 672.5 962 43.1
Peaxi162Scf00660g00118 Petunia axillaris HOM05D005193 ORTHO05D006316 1.6e-188 664.1 647 53.5
Cpa.g.sc12.274 Carica papaya HOM05D005193 ORTHO05D006316 3.2e-181 639.8 651 54.4
arahy.Tifrunner.gnm1.ann1.6PV7EE Arachis hypogaea HOM05D005193 ORTHO05D006316 2.0e-175 620.5 426 74.6
HPP92_008858 Vanilla planifolia HOM05D005193 ORTHO05D006316 2.9e-174 616.7 867 41.5
Hund02018 Selenicereus undatus HOM05D005193 ORTHO05D006316 1.9e-170 604.0 966 37.9
vmacro09699 Vaccinium macrocarpon HOM05D005193 ORTHO05D006316 1.4e-168 597.8 498 59.8
Mapoly0038s0063 Marchantia polymorpha HOM05D005193 ORTHO05D006316 6.8e-160 568.9 865 37.5
Pp3c16_8580 Physcomitrium patens HOM05D005193 ORTHO05D006316 2.5e-154 550.4 857 37.5
Nitab4.5_0000168g0220 Nicotiana tabacum HOM05D005193 ORTHO05D006316 4.0e-152 543.1 503 54.3
SMO115G0237 Selaginella moellendorffii HOM05D005193 ORTHO05D006316 4.2e-149 533.1 906 36.1
Lalb_Chr17g0348631 Lupinus albus HOM05D005193 ORTHO05D006316 4.3e-146 523.1 386 72.3
CSS0020168 Camellia sinensis var. sinensis HOM05D005193 ORTHO05D006316 1.0e-131 475.3 479 52.2
Nitab4.5_0003450g0040 Nicotiana tabacum HOM05D005193 ORTHO05D006316 8.7e-123 445.7 464 51.1
CBR_g49709 Chara braunii HOM05D005193 ORTHO05D000048 1.1e-120 438.7 895 34.0
arahy.Tifrunner.gnm1.ann1.89LBMG Arachis hypogaea HOM05D005193 ORTHO05D006316 7.6e-119 432.6 315 72.1
AagrBONN_evm.TU.Sc2ySwM_344.2169 Anthoceros agrestis HOM05D005193 ORTHO05D006316 5.9e-111 406.4 646 37.8
Lj1C877G15 Lonicera japonica HOM05D005193 ORTHO05D006316 2.9e-110 404.1 415 52.5
ATR0585G046 Amborella trichopoda HOM05D005193 ORTHO05D006316 2.4e-104 384.4 370 52.2
CDE02G4624 Ceratophyllum demersum HOM05D005193 ORTHO05D006316 2.2e-86 324.7 381 47.2
Lj1C877G9 Lonicera japonica HOM05D005193 ORTHO05D006316 2.2e-86 324.7 268 61.6
Nitab4.5_0003450g0030 Nicotiana tabacum HOM05D005193 ORTHO05D006316 4.0e-75 287.3 408 42.4
arahy.Tifrunner.gnm1.ann1.DP08C5 Arachis hypogaea HOM05D005193 ORTHO05D006316 2.6e-74 284.6 254 61.4
arahy.Tifrunner.gnm1.ann1.SW2PFC Arachis hypogaea HOM05D005193 ORTHO05D006316 2.6e-74 284.6 254 61.4
SalBow8G4471 Salvia bowleyana HOM05D005193 ORTHO05D006316 1.7e-57 228.8 426 32.6
AUR62015822 Chenopodium quinoa HOM05D005193 ORTHO05D006316 1.6e-55 222.2 534 30.9
Nitab4.5_0000168g0230 Nicotiana tabacum HOM05D005193 ORTHO05D006316 9.5e-45 186.4 211 45.5
Lsat_1_v5_gn_6_67380 Lactuca sativa HOM05D005193 ORTHO05D006316 4.7e-44 184.1 197 50.3
Lsat_1_v5_gn_9_67960 Lactuca sativa HOM05D005193 ORTHO05D006316 4.7e-44 184.1 197 50.3
CDE02G0254 Ceratophyllum demersum HOM05D005193 ORTHO05D006316 3.1e-43 181.4 283 39.6
Solyc12g005090.3 Solanum lycopersicum HOM05D005193 ORTHO05D006316 1.9e-40 172.2 203 44.3
TPR.G2800 Trifolium pratense HOM05D005193 ORTHO05D006316 3.0e-38 164.9 107 76.6
CAN.G1219.3 Capsicum annuum HOM05D005193 ORTHO05D006316 4.3e-37 161.0 154 52.6
CDE02G0065 Ceratophyllum demersum HOM05D005193 ORTHO05D006316 1.5e-34 152.5 218 40.4
Gorai.011G223800 Gossypium raimondii HOM05D005193 ORTHO05D006316 6.4e-33 147.1 164 47.6
arahy.Tifrunner.gnm1.ann1.BLY3DW Arachis hypogaea HOM05D005193 ORTHO05D006316 1.0e-30 139.8 120 65.8
Peaxi162Scf00660g00119 Petunia axillaris HOM05D005193 ORTHO05D006316 8.1e-28 130.2 162 42.0
AagrBONN_evm.TU.Sc2ySwM_362.1473 Anthoceros agrestis HOM05D005193 ORTHO05D006316 3.1e-27 128.3 110 56.4
CDE02G4589 Ceratophyllum demersum HOM05D005193 ORTHO05D006316 9.9e-26 123.2 236 34.3
EL10Ac4g07765 Beta vulgaris HOM05D005193 ORTHO05D006316 4.9e-25 120.9 185 39.5
ATR0585G123 Amborella trichopoda HOM05D005193 ORTHO05D006316 6.4e-25 120.6 170 40.6
Sabra06G0024500 Salix brachista HOM05D005193 ORTHO05D006316 1.9e-24 119.0 84 67.9
Sabra16G0098300 Salix brachista HOM05D005193 ORTHO05D006316 9.3e-24 116.7 85 67.1
TPR.G2798 Trifolium pratense HOM05D005193 ORTHO05D006316 5.1e-22 110.9 72 73.6
Gohir.D10G199632 Gossypium hirsutum HOM05D005193 ORTHO05D006316 4.8e-20 104.4 135 41.5
ATR0585G071 Amborella trichopoda HOM05D005193 ORTHO05D006316 1.2e-18 99.8 138 38.4
CSS0028155 Camellia sinensis var. sinensis HOM05D005193 ORTHO05D006316 1.5e-18 99.4 87 57.5
CSS0039097 Camellia sinensis var. sinensis HOM05D005193 ORTHO05D006316 1.5e-18 99.4 87 57.5
Haze_09712 Corylus avellana HOM05D005193 ORTHO05D006316 2.0e-18 99.0 114 50.0
Cpa.g.sc12.275 Carica papaya HOM05D005193 ORTHO05D006316 7.6e-18 97.1 95 48.4
MD16G1253600 Malus domestica HOM05D005193 ORTHO05D006316 1.7e-17 95.9 64 73.4
Cpa.g.sc12.273 Carica papaya HOM05D005193 ORTHO05D006316 8.4e-17 93.6 152 43.4
CSS0047254 Camellia sinensis var. sinensis HOM05D005193 ORTHO05D006316 2.4e-16 92.0 192 34.4
Eucgr.F03486 Eucalyptus grandis HOM05D005193 ORTHO05D006316 4.2e-16 91.3 111 51.4
Aqoxy4G00029 Aquilegia oxysepala HOM05D002071 ORTHO05D002109 2.1e-15 89.0 98 43.9
Gorai.001G274400 Gossypium raimondii HOM05D005193 ORTHO05D006316 2.7e-15 88.6 122 40.2
CAN.G1219.2 Capsicum annuum HOM05D005193 ORTHO05D006316 4.6e-15 87.8 96 51.0
GSVIVG01037691001 Vitis vinifera HOM05D005193 ORTHO05D006316 1.3e-14 86.3 113 47.8
Oeu041837.1 Olea europaea HOM05D005193 ORTHO05D006316 3.0e-14 85.1 93 47.3
SalBow8G0199 Salvia bowleyana HOM05D005193 ORTHO05D006316 1.9e-13 82.4 87 49.4
Gohir.D08G017066 Gossypium hirsutum HOM05D005193 ORTHO05D006316 2.5e-13 82.0 75 54.7
SEGI_10601 Sequoiadendron giganteum HOM05D005193 ORTHO05D006316 2.9e-09 68.6 79 39.2
SEGI_26698 Sequoiadendron giganteum HOM05D005193 ORTHO05D006316 3.2e-08 65.1 96 33.3
Hund02002 Selenicereus undatus HOM05D005193 ORTHO05D006316 1.2e-07 63.2 56 50.0
SEGI_35263 Sequoiadendron giganteum HOM05D005193 ORTHO05D006316 3.9e-06 58.2 53 54.7
SEGI_12195 Sequoiadendron giganteum HOM05D005193 ORTHO05D006316 5.1e-06 57.8 103 35.9


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