Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g055240 Medicago truncatula HOM05D009458 ORTHO05D012015 1.1e-86 323.2 156 100.0
Medtr1g083640 Medicago truncatula HOM05D009458 ORTHO05D012015 4.4e-75 284.6 143 94.4
Medtr0558s0020 Medicago truncatula HOM05D009458 ORTHO05D012015 2.2e-74 282.3 143 94.4
Medtr0337s0040 Medicago truncatula HOM05D009458 ORTHO05D012015 2.7e-72 275.4 142 93.0
Medtr2g014100 Medicago truncatula HOM05D009458 ORTHO05D012015 7.8e-72 273.9 143 92.3
Medtr0019s0290 Medicago truncatula HOM05D009458 ORTHO05D012015 2.3e-71 272.3 141 92.9
Medtr8g446020 Medicago truncatula HOM05D009458 ORTHO05D012015 2.3e-71 272.3 142 92.3
Medtr6g090505 Medicago truncatula HOM05D009458 ORTHO05D012015 3.9e-71 271.6 143 90.9
TPR.G8434 Trifolium pratense HOM05D009458 ORTHO05D012015 2.2e-66 255.8 142 86.6
TPR.G17486 Trifolium pratense HOM05D009458 ORTHO05D012015 5.4e-65 251.1 142 84.5
TPR.G36305 Trifolium pratense HOM05D009458 ORTHO05D012015 4.6e-64 248.1 142 82.4
TPR.G32978 Trifolium pratense HOM05D009458 ORTHO05D012015 2.2e-58 229.2 143 76.2
Medtr3g008240 Medicago truncatula HOM05D009458 ORTHO05D012015 6.4e-58 227.6 113 95.6
Medtr4g040430 Medicago truncatula HOM05D009458 ORTHO05D012015 1.8e-52 209.5 111 91.9
TPR.G22140 Trifolium pratense HOM05D009458 ORTHO05D012015 3.7e-37 158.7 86 84.9
Medtr5g071590 Medicago truncatula HOM05D009458 ORTHO05D012015 2.4e-36 156.0 76 92.1
TPR.G28057 Trifolium pratense HOM05D000045 ORTHO05D000067 5.7e-14 81.6 147 29.9
Medtr1281s0010 Medicago truncatula HOM05D009458 ORTHO05D012015 2.8e-13 79.3 38 94.7
TPR.G18125 Trifolium pratense HOM05D000045 ORTHO05D000067 2.8e-13 79.3 118 32.2
Atru.chr5.2454 Acer truncatum HOM05D003511 ORTHO05D004403 8.2e-13 77.8 122 37.7
EL10Ac7g17614 Beta vulgaris HOM05D000045 ORTHO05D000611 1.4e-12 77.0 110 36.4
EL10Ac7g16467 Beta vulgaris HOM05D000045 ORTHO05D000067 1.8e-12 76.6 110 36.4
EL10Ac1g01868 Beta vulgaris HOM05D000045 ORTHO05D000067 3.1e-12 75.9 110 36.4
QL04p064028 Quercus lobata HOM05D000045 ORTHO05D000067 7.0e-12 74.7 120 30.8
QL07p011111 Quercus lobata HOM05D000045 ORTHO05D000067 7.0e-12 74.7 120 30.8
TPR.G34153 Trifolium pratense HOM05D000045 ORTHO05D000067 1.2e-11 73.9 118 38.1
FvH4_3g31442 Fragaria vesca HOM05D000045 ORTHO05D000067 2.0e-11 73.2 109 36.7
TPR.G40442 Trifolium pratense HOM05D000045 ORTHO05D000067 4.5e-11 72.0 115 29.6
CiPaw.09G035500 Carya illinoinensis HOM05D000045 ORTHO05D000067 5.9e-11 71.6 111 34.2
TWI73G1051 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 3.8e-10 68.9 115 32.2
RhsimUnG0130200 Rhododendron simsii HOM05D000045 ORTHO05D000067 6.5e-10 68.2 108 32.4
Rhsim02G0126700 Rhododendron simsii HOM05D000045 ORTHO05D000067 1.1e-09 67.4 110 31.8
TWI18G0018 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 1.5e-09 67.0 115 32.2
EL10Ac6g14532 Beta vulgaris HOM05D000045 ORTHO05D000067 2.5e-09 66.2 120 31.7
COL.COLO4_12964 Corchorus olitorius HOM05D000045 ORTHO05D000067 5.5e-09 65.1 113 31.9
Ah.11g042870 Amaranthus hybridus HOM05D000045 ORTHO05D000611 9.4e-09 64.3 99 34.3
CSS0021123 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 9.4e-09 64.3 110 33.6
TPR.G23616 Trifolium pratense HOM05D000045 ORTHO05D000067 1.2e-08 63.9 110 35.5
COL.COLO4_29562 Corchorus olitorius HOM05D000045 ORTHO05D000067 1.6e-08 63.5 113 31.0
CSS0047126 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.1e-08 63.2 110 30.9
TPR.G9806 Trifolium pratense HOM05D000045 ORTHO05D000067 2.1e-08 63.2 115 34.8
Atru.chr10.181 Acer truncatum HOM05D000045 ORTHO05D012015 2.7e-08 62.8 123 29.3
Rhsim10G0174800 Rhododendron simsii HOM05D000045 ORTHO05D000067 2.7e-08 62.8 118 30.5
CSS0007642 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 3.6e-08 62.4 110 31.8
CSS0017425 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 4.7e-08 62.0 110 32.7
CSS0045912 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 4.7e-08 62.0 110 32.7
CSS0002394 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 6.1e-08 61.6 110 31.8
TWI74G1247 Tripterygium wilfordii HOM05D000045 ORTHO05D012015 8.0e-08 61.2 102 31.4
CSS0041074 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.0e-07 60.8 109 33.0
EL10Ac2g03365 Beta vulgaris HOM05D000045 ORTHO05D019836 1.8e-07 60.1 100 32.0
CiPaw.05G186800 Carya illinoinensis HOM05D000045 ORTHO05D000067 1.8e-07 60.1 115 33.9
TAR483G0002 Trochodendron aralioides HOM05D000045 ORTHO05D000067 1.8e-07 60.1 104 35.6
CSS0014838 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 3.0e-07 59.3 110 29.1
QL93p0073_0477 Quercus lobata HOM05D000045 ORTHO05D000067 4.0e-07 58.9 97 32.0
AUR62040076 Chenopodium quinoa HOM05D000045 ORTHO05D000067 5.2e-07 58.5 111 30.6
Rhsim05G0213300 Rhododendron simsii HOM05D000045 ORTHO05D000067 6.7e-07 58.2 110 31.8
Aqoxy4G01663 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 8.8e-07 57.8 122 28.7
Aqoxy6G02606 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 8.8e-07 57.8 124 30.6
Medtr6g051425 Medicago truncatula HOM05D000045 ORTHO05D000067 8.8e-07 57.8 142 28.2
Aqoxy5G02149 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 1.2e-06 57.4 122 26.2
CSS0018197 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.2e-06 57.4 110 32.7
AUR62017476 Chenopodium quinoa HOM05D000045 ORTHO05D000611 1.2e-06 57.4 107 29.9
Os03g0164400 Oryza sativa ssp. japonica HOM05D000045 ORTHO05D000067 1.2e-06 57.4 104 29.8
HPP92_013275 Vanilla planifolia HOM05D000045 ORTHO05D000067 1.2e-06 57.4 112 32.1
Solyc04g071265.1 Solanum lycopersicum HOM05D000045 ORTHO05D000067 1.5e-06 57.0 115 33.0
EL10Ac2g03509 Beta vulgaris HOM05D000045 ORTHO05D000067 2.0e-06 56.6 119 30.3
Rhsim03G0118100 Rhododendron simsii HOM05D000045 ORTHO05D000067 2.0e-06 56.6 97 30.9
Lj6g0001679 Lotus japonicus HOM05D000045 ORTHO05D010736 2.6e-06 56.2 119 26.1
Solyc01g066625.1 Solanum lycopersicum HOM05D000045 ORTHO05D000067 2.6e-06 56.2 115 33.0
Solyc03g094125.1 Solanum lycopersicum HOM05D000045 ORTHO05D000067 2.6e-06 56.2 115 33.0
Solyc03g150148.1 Solanum lycopersicum HOM05D000045 ORTHO05D000067 2.6e-06 56.2 115 33.0
Solyc04g070995.1 Solanum lycopersicum HOM05D000045 ORTHO05D000067 2.6e-06 56.2 115 33.0
Solyc05g009583.1 Solanum lycopersicum HOM05D000045 ORTHO05D000611 2.6e-06 56.2 115 33.0
Solyc10g044585.1 Solanum lycopersicum HOM05D000045 ORTHO05D000067 2.6e-06 56.2 115 33.0
Solyc11g020215.1 Solanum lycopersicum HOM05D000045 ORTHO05D000067 2.6e-06 56.2 115 33.0
Solyc12g011027.1 Solanum lycopersicum HOM05D000045 ORTHO05D000067 2.6e-06 56.2 115 33.0
TAR511G0003 Trochodendron aralioides HOM05D000045 ORTHO05D000067 2.6e-06 56.2 104 33.7
TPR.G16952 Trifolium pratense HOM05D000045 ORTHO05D000067 3.3e-06 55.8 125 25.6
Solyc01g150145.1 Solanum lycopersicum HOM05D000045 ORTHO05D000067 4.4e-06 55.5 115 32.2
Ciclev10027335m.g Citrus clementina HOM05D000045 ORTHO05D000611 5.7e-06 55.1 117 30.8
CiPaw.03G222600 Carya illinoinensis HOM05D000045 ORTHO05D000067 7.5e-06 54.7 116 34.5
TPR.G7121 Trifolium pratense HOM05D000045 ORTHO05D010736 7.5e-06 54.7 111 27.0
CANSAT64G2947 Cannabis sativa HOM05D000045 ORTHO05D000067 9.7e-06 54.3 112 30.4
FvH4_2g38071 Fragaria vesca HOM05D000045 ORTHO05D000067 9.7e-06 54.3 109 27.5
FvH4_3g22481 Fragaria vesca HOM05D000045 ORTHO05D035562 9.7e-06 54.3 109 27.5
Os10g0571900 Oryza sativa ssp. japonica HOM05D000045 ORTHO05D000067 9.7e-06 54.3 108 31.5
Rhsim01G0226000 Rhododendron simsii HOM05D000045 ORTHO05D000067 9.7e-06 54.3 110 29.1


User provided reference genes

Program Settings