Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g054840 Medicago truncatula HOM05D002090 ORTHO05D001923 1.6e-97 359.4 177 100.0
Medtr2g450060 Medicago truncatula HOM05D002090 ORTHO05D001923 4.7e-49 198.4 176 57.4
Medtr5g064590 Medicago truncatula HOM05D002090 ORTHO05D001923 2.1e-44 183.0 149 62.4
Medtr5g004860 Medicago truncatula HOM05D002090 ORTHO05D001923 1.7e-43 179.9 142 62.0
Medtr0003s0290 Medicago truncatula HOM05D002090 ORTHO05D001923 3.9e-43 178.7 143 58.0
Medtr7g450880 Medicago truncatula HOM05D002090 ORTHO05D001923 2.1e-41 172.9 143 58.0
Medtr5g041170 Medicago truncatula HOM05D002090 ORTHO05D001923 3.6e-41 172.2 146 59.6
Medtr6g055250 Medicago truncatula HOM05D002090 ORTHO05D001923 1.1e-37 160.6 142 54.2
Medtr4g070160 Medicago truncatula HOM05D002090 ORTHO05D001923 8.7e-35 151.0 107 67.3
Medtr8g027910 Medicago truncatula HOM05D002090 ORTHO05D001923 2.8e-33 146.0 118 60.2
Medtr1g043690 Medicago truncatula HOM05D002090 ORTHO05D001923 3.6e-33 145.6 135 55.6
Medtr7g052740 Medicago truncatula HOM05D002090 ORTHO05D001923 4.8e-25 118.6 143 45.5
Psat6g082280 Pisum sativum HOM05D002090 ORTHO05D001923 1.9e-21 106.7 107 46.7
Psat5g067480 Pisum sativum HOM05D002090 ORTHO05D001923 5.5e-21 105.1 134 44.0
TPR.G10894 Trifolium pratense HOM05D002090 ORTHO05D001923 3.9e-19 99.0 170 39.4
Medtr6g045290 Medicago truncatula HOM05D000336 ORTHO05D002705 8.7e-19 97.8 89 49.4
Medtr7g025160 Medicago truncatula HOM05D002090 ORTHO05D001923 6.2e-17 91.7 79 55.7
TPR.G21912 Trifolium pratense HOM05D000096 ORTHO05D000045 1.7e-14 83.6 135 35.6
Medtr5g053590 Medicago truncatula HOM05D002090 ORTHO05D001923 8.4e-14 81.3 184 31.5
TPR.G31936 Trifolium pratense HOM05D002090 ORTHO05D001923 1.1e-13 80.9 140 35.0
TPR.G2805 Trifolium pratense HOM05D002090 ORTHO05D001923 1.4e-13 80.5 140 35.7
Glyma.19G107800 Glycine max HOM05D002090 ORTHO05D001923 2.5e-13 79.7 154 30.5
TPR.G13259 Trifolium pratense HOM05D002090 ORTHO05D001923 2.5e-13 79.7 144 31.9
TPR.G17441 Trifolium pratense HOM05D002090 ORTHO05D001923 4.2e-13 79.0 111 36.0
Glyma.09G106000 Glycine max HOM05D002090 ORTHO05D001923 7.2e-13 78.2 154 29.9
Glyma.13G025000 Glycine max HOM05D002090 ORTHO05D001923 2.1e-12 76.6 152 30.3
Glyma.15G235800 Glycine max HOM05D002090 ORTHO05D001923 3.5e-12 75.9 150 30.7
Psat4g064480 Pisum sativum HOM05D002090 ORTHO05D001923 4.6e-12 75.5 95 40.0
TPR.G34836 Trifolium pratense HOM05D000096 ORTHO05D000045 4.6e-12 75.5 102 33.3
Glyma.03G121900 Glycine max HOM05D002090 ORTHO05D001923 7.9e-12 74.7 102 35.3
Glyma.04G181700 Glycine max HOM05D002090 ORTHO05D001923 7.9e-12 74.7 164 31.1
Glyma.08G253400 Glycine max HOM05D002090 ORTHO05D001923 2.3e-11 73.2 160 30.0
Glyma.02G178600 Glycine max HOM05D002090 ORTHO05D001923 3.0e-11 72.8 123 30.1
Glyma.17G216450 Glycine max HOM05D002090 ORTHO05D001923 3.0e-11 72.8 121 30.6
Glyma.03G056600 Glycine max HOM05D002090 ORTHO05D001923 3.9e-11 72.4 170 30.6
Glyma.13G029300 Glycine max HOM05D002090 ORTHO05D001923 6.7e-11 71.6 155 29.0
Glyma.07G214000 Glycine max HOM05D002090 ORTHO05D001923 1.1e-10 70.9 137 32.1
Glyma.05G078800 Glycine max HOM05D002090 ORTHO05D001923 1.9e-10 70.1 71 40.8
Glyma.09G080300 Glycine max HOM05D002090 ORTHO05D001923 1.9e-10 70.1 71 42.3
Medtr8g076180 Medicago truncatula HOM05D002090 ORTHO05D001923 2.5e-10 69.7 172 31.4
Glyma.13G028600 Glycine max HOM05D002090 ORTHO05D001923 7.4e-10 68.2 71 39.4
Glyma.03G083300 Glycine max HOM05D002090 ORTHO05D001923 9.7e-10 67.8 118 33.9
TPR.G8108 Trifolium pratense HOM05D000096 ORTHO05D000045 2.8e-09 66.2 103 34.0
Glyma.18G142200 Glycine max HOM05D002090 ORTHO05D001923 3.7e-09 65.9 119 32.8
Medtr3g055660 Medicago truncatula HOM05D002090 ORTHO05D001923 4.8e-09 65.5 146 32.2
Medtr4g014890 Medicago truncatula HOM05D002090 ORTHO05D001923 4.8e-09 65.5 146 32.2
TPR.G37532 Trifolium pratense HOM05D002090 ORTHO05D001923 1.8e-08 63.5 95 33.7
Medtr6g059860 Medicago truncatula HOM05D002090 ORTHO05D001923 2.4e-08 63.2 146 32.2
Glyma.20G065700 Glycine max HOM05D002090 ORTHO05D001923 5.3e-08 62.0 99 33.3
Lalb_Chr11g0064711 Lupinus albus HOM05D002090 ORTHO05D001923 5.3e-08 62.0 102 33.3
Medtr6g464080 Medicago truncatula HOM05D002090 ORTHO05D001923 5.3e-08 62.0 104 31.7
TPR.G15973 Trifolium pratense HOM05D001685 ORTHO05D007488 5.3e-08 62.0 98 26.5
TPR.G21729 Trifolium pratense HOM05D003813 ORTHO05D004557 9.0e-08 61.2 101 32.7
TPR.G9555 Trifolium pratense HOM05D000096 ORTHO05D000045 1.2e-07 60.8 105 34.3
Glyma.11G178600 Glycine max HOM05D002090 ORTHO05D001923 1.5e-07 60.5 157 28.0
Glyma.20G053800 Glycine max HOM05D002090 ORTHO05D001923 1.5e-07 60.5 129 29.5
Glyma.07G223800 Glycine max HOM05D002090 ORTHO05D001923 2.0e-07 60.1 139 30.9
TPR.G5052 Trifolium pratense HOM05D000096 ORTHO05D000045 2.0e-07 60.1 73 37.0
Glyma.09G107433 Glycine max HOM05D002090 ORTHO05D014779 2.6e-07 59.7 107 35.5
Medtr2g055290 Medicago truncatula HOM05D002090 ORTHO05D001923 3.4e-07 59.3 77 39.0
Medtr0048s0080 Medicago truncatula HOM05D008036 ORTHO05D000174 4.5e-07 58.9 116 34.5
Psat1g003680 Pisum sativum HOM05D002090 ORTHO05D001923 5.9e-07 58.5 78 37.2
ECA232G2690 Erigeron canadensis HOM05D000353 ORTHO05D000174 7.7e-07 58.2 91 31.9
TPR.G14233 Trifolium pratense HOM05D000096 ORTHO05D000045 1.0e-06 57.8 85 36.5
TPR.G24036 Trifolium pratense HOM05D000096 ORTHO05D009933 1.0e-06 57.8 66 37.9
VMungo0540G0980 Vigna mungo HOM05D002090 ORTHO05D001923 1.0e-06 57.8 106 29.2
Ah.11g041650 Amaranthus hybridus HOM05D000353 ORTHO05D000174 2.2e-06 56.6 129 24.8
Medtr1g105785 Medicago truncatula HOM05D008036 ORTHO05D000174 2.2e-06 56.6 107 29.9
Psat1g065320 Pisum sativum HOM05D002090 ORTHO05D001923 2.2e-06 56.6 46 47.8
Glyma.13G082501 Glycine max HOM05D002090 ORTHO05D001923 2.9e-06 56.2 135 25.9
HanXRQChr15g0464461 Helianthus annuus HOM05D003964 ORTHO05D000174 2.9e-06 56.2 71 38.0
Medtr4g073560 Medicago truncatula HOM05D000049 ORTHO05D001923 3.8e-06 55.8 102 32.4
Medtr8g076570 Medicago truncatula HOM05D002790 ORTHO05D003033 3.8e-06 55.8 133 29.3
ECA236G4996 Erigeron canadensis HOM05D000096 ORTHO05D000045 5.0e-06 55.5 135 31.9
HanXRQChr05g0145471 Helianthus annuus HOM05D003964 ORTHO05D000174 6.5e-06 55.1 69 40.6
TPR.G39328 Trifolium pratense HOM05D002090 ORTHO05D001923 6.5e-06 55.1 65 36.9
HanXRQChr01g0015091 Helianthus annuus HOM05D003964 ORTHO05D000174 8.5e-06 54.7 68 39.7


User provided reference genes

Program Settings