Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g054745 Medicago truncatula HOM05D004894 ORTHO05D005689 1.6e-133 479.6 268 100.0
Medtr1g054740 Medicago truncatula HOM05D004894 ORTHO05D005689 1.5e-59 233.8 142 85.2
Medtr5g081820 Medicago truncatula HOM05D004894 ORTHO05D005689 8.5e-50 201.4 199 56.3
Medtr5g081840 Medicago truncatula HOM05D004894 ORTHO05D005689 2.7e-48 196.4 164 66.5
Medtr1g058550 Medicago truncatula HOM05D004894 ORTHO05D005689 1.2e-43 181.0 152 65.8
TPR.G11233 Trifolium pratense HOM05D004894 ORTHO05D005689 4.2e-41 172.6 143 63.6
Medtr1g055290 Medicago truncatula HOM05D004894 ORTHO05D005689 4.5e-35 152.5 144 57.6
TPR.G30772 Trifolium pratense HOM05D004894 ORTHO05D005689 4.2e-33 146.0 143 55.9
Medtr1g054800 Medicago truncatula HOM05D004894 ORTHO05D005689 9.4e-33 144.8 143 56.6
TPR.G14498 Trifolium pratense HOM05D004894 ORTHO05D005689 4.7e-32 142.5 154 51.9
TPR.G30770 Trifolium pratense HOM05D004894 ORTHO05D005689 1.7e-29 134.0 144 50.7
Medtr4g036790 Medicago truncatula HOM05D004894 ORTHO05D005689 1.4e-28 131.0 163 49.7
TPR.G22347 Trifolium pratense HOM05D004894 ORTHO05D005689 2.4e-28 130.2 154 50.0
TPR.G30777 Trifolium pratense HOM05D004894 ORTHO05D005689 3.5e-27 126.3 165 44.8
TPR.G12635 Trifolium pratense HOM05D004894 ORTHO05D005689 2.3e-23 113.6 165 45.5
Medtr4g122770 Medicago truncatula HOM05D063721 ORTHO05D017842 4.0e-23 112.8 105 71.4
Medtr4g062290 Medicago truncatula HOM05D004894 ORTHO05D005689 9.8e-22 108.2 147 46.3
TPR.G14508 Trifolium pratense HOM05D004894 ORTHO05D005689 2.7e-19 100.1 168 42.3
TPR.G12614 Trifolium pratense HOM05D004894 ORTHO05D005689 1.1e-17 94.7 146 41.8
Psat3g039600 Pisum sativum HOM05D004894 ORTHO05D005689 4.2e-17 92.8 146 38.4
Psat7g222760 Pisum sativum HOM05D004894 ORTHO05D005689 5.5e-17 92.4 148 41.2
TPR.G12588 Trifolium pratense HOM05D000036 ORTHO05D005689 1.4e-15 87.8 162 37.7
TPR.G21506 Trifolium pratense HOM05D004894 ORTHO05D005689 2.3e-15 87.0 173 38.7
Psat0s6062g0040 Pisum sativum HOM05D004894 ORTHO05D005689 4.0e-15 86.3 147 36.7
TPR.G36147 Trifolium pratense HOM05D004894 ORTHO05D005689 1.2e-14 84.7 174 37.9
TPR.G36461 Trifolium pratense HOM05D004894 ORTHO05D005689 2.0e-14 84.0 124 41.9
Medtr0238s0050 Medicago truncatula HOM05D024644 ORTHO05D017842 5.7e-14 82.4 144 40.3
Lalb_Chr03g0035451 Lupinus albus HOM05D004894 ORTHO05D005689 6.6e-10 68.9 140 36.4
Medtr2g010190 Medicago truncatula HOM05D024644 ORTHO05D017842 8.6e-10 68.6 35 88.6
Medtr7g066790 Medicago truncatula HOM05D024644 ORTHO05D017842 1.9e-09 67.4 78 46.2
arahy.Tifrunner.gnm1.ann1.VH20NJ Arachis hypogaea HOM05D004894 ORTHO05D005689 2.5e-09 67.0 149 35.6
Lalb_Chr03g0035461 Lupinus albus HOM05D004894 ORTHO05D005689 4.3e-09 66.2 140 33.6
Medtr8g015060 Medicago truncatula HOM05D015303 ORTHO05D017842 5.6e-09 65.9 31 93.5
VMungo0464G0707 Vigna mungo HOM05D004894 ORTHO05D005689 6.1e-08 62.4 140 36.4
Medtr5g010510 Medicago truncatula HOM05D024644 ORTHO05D017842 1.8e-07 60.8 112 34.8
Medtr8g027545 Medicago truncatula HOM05D021244 ORTHO05D257405 2.3e-07 60.5 38 76.3
Medtr5g038130 Medicago truncatula HOM05D021244 ORTHO05D261635 3.1e-07 60.1 36 77.8
Lalb_Chr19g0130051 Lupinus albus HOM05D004894 ORTHO05D005689 4.0e-07 59.7 159 31.4
Lalb_Chr19g0130071 Lupinus albus HOM05D004894 ORTHO05D005689 4.0e-07 59.7 159 31.4
Lalb_Chr19g0130151 Lupinus albus HOM05D004894 ORTHO05D005689 5.2e-07 59.3 141 29.1
Lalb_Chr19g0130161 Lupinus albus HOM05D004894 ORTHO05D005689 5.2e-07 59.3 141 29.1
Medtr3g090727 Medicago truncatula HOM05D021244 ORTHO05D261328 5.2e-07 59.3 29 89.7
Psat3g038720 Pisum sativum HOM05D004894 ORTHO05D005689 8.9e-07 58.5 60 45.0
Lalb_Chr14g0362611 Lupinus albus HOM05D004894 ORTHO05D005689 4.4e-06 56.2 143 28.0
Ca_26810_v3 Cicer arietinum L. HOM05D004894 ORTHO05D005689 7.5e-06 55.5 78 41.0
Medtr1g018130 Medicago truncatula HOM05D004894 ORTHO05D005689 7.5e-06 55.5 83 47.0


User provided reference genes

Program Settings