Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g054740 Medicago truncatula HOM05D004894 ORTHO05D005689 3.4e-92 341.7 175 100.0
Medtr5g081840 Medicago truncatula HOM05D004894 ORTHO05D005689 4.4e-63 245.0 176 72.7
Medtr5g081820 Medicago truncatula HOM05D004894 ORTHO05D005689 7.0e-61 237.7 170 70.6
Medtr1g054745 Medicago truncatula HOM05D004894 ORTHO05D005689 2.0e-60 236.1 142 85.2
TPR.G11233 Trifolium pratense HOM05D004894 ORTHO05D005689 3.7e-54 215.3 176 65.3
Medtr1g058550 Medicago truncatula HOM05D004894 ORTHO05D005689 4.8e-54 214.9 170 65.9
Medtr1g055290 Medicago truncatula HOM05D004894 ORTHO05D005689 7.5e-47 191.0 176 59.1
TPR.G30772 Trifolium pratense HOM05D004894 ORTHO05D005689 4.9e-46 188.3 176 58.0
Medtr1g054800 Medicago truncatula HOM05D004894 ORTHO05D005689 5.0e-43 178.3 176 55.7
TPR.G14498 Trifolium pratense HOM05D004894 ORTHO05D005689 8.0e-41 171.0 175 52.6
TPR.G30770 Trifolium pratense HOM05D004894 ORTHO05D005689 5.2e-40 168.3 163 55.2
Medtr4g036790 Medicago truncatula HOM05D004894 ORTHO05D005689 5.7e-39 164.9 174 55.2
TPR.G22347 Trifolium pratense HOM05D004894 ORTHO05D005689 5.7e-39 164.9 178 51.7
TPR.G30777 Trifolium pratense HOM05D004894 ORTHO05D005689 2.9e-38 162.5 170 51.2
TPR.G12635 Trifolium pratense HOM05D004894 ORTHO05D005689 1.5e-31 140.2 178 47.2
Medtr4g062290 Medicago truncatula HOM05D004894 ORTHO05D005689 2.0e-31 139.8 178 47.8
TPR.G12614 Trifolium pratense HOM05D004894 ORTHO05D005689 4.3e-26 122.1 178 42.7
Psat7g222760 Pisum sativum HOM05D004894 ORTHO05D005689 1.6e-25 120.2 178 42.7
TPR.G14508 Trifolium pratense HOM05D004894 ORTHO05D005689 2.1e-25 119.8 180 43.9
Psat0s6062g0040 Pisum sativum HOM05D004894 ORTHO05D005689 1.2e-23 114.0 165 41.2
Psat3g039600 Pisum sativum HOM05D004894 ORTHO05D005689 1.2e-23 114.0 183 42.6
TPR.G21506 Trifolium pratense HOM05D004894 ORTHO05D005689 9.2e-21 104.4 185 40.0
TPR.G12588 Trifolium pratense HOM05D000036 ORTHO05D005689 1.6e-20 103.6 172 37.2
TPR.G36147 Trifolium pratense HOM05D004894 ORTHO05D005689 4.6e-20 102.1 186 39.2
TPR.G36461 Trifolium pratense HOM05D004894 ORTHO05D005689 1.4e-16 90.5 149 40.3
arahy.Tifrunner.gnm1.ann1.VH20NJ Arachis hypogaea HOM05D004894 ORTHO05D005689 4.0e-16 89.0 171 35.1
Lalb_Chr03g0035461 Lupinus albus HOM05D004894 ORTHO05D005689 4.9e-14 82.0 171 33.3
Glyma.02G080000 Glycine max HOM05D004894 ORTHO05D005689 5.4e-13 78.6 177 29.9
Lj2g0017521 Lotus japonicus HOM05D004894 ORTHO05D005689 5.4e-13 78.6 178 34.8
Lalb_Chr19g0130151 Lupinus albus HOM05D004894 ORTHO05D005689 7.1e-13 78.2 174 31.0
Lalb_Chr19g0130161 Lupinus albus HOM05D004894 ORTHO05D005689 7.1e-13 78.2 174 31.0
VMungo0464G0707 Vigna mungo HOM05D004894 ORTHO05D005689 7.1e-13 78.2 175 37.1
TPR.G36348 Trifolium pratense HOM05D004894 ORTHO05D005689 9.2e-13 77.8 172 30.8
Phvul.004G091800 Phaseolus vulgaris HOM05D004894 ORTHO05D005689 2.1e-12 76.6 174 35.6
Lalb_Chr03g0035451 Lupinus albus HOM05D004894 ORTHO05D005689 4.6e-12 75.5 172 34.9
Lalb_Chr19g0130051 Lupinus albus HOM05D004894 ORTHO05D005689 4.6e-12 75.5 170 31.2
Lalb_Chr19g0130071 Lupinus albus HOM05D004894 ORTHO05D005689 4.6e-12 75.5 170 31.2
Ca_26810_v3 Cicer arietinum L. HOM05D004894 ORTHO05D005689 1.3e-11 73.9 103 40.8
Lalb_Chr03g0035441 Lupinus albus HOM05D004894 ORTHO05D005689 1.3e-11 73.9 186 34.4
Lalb_Chr03g0035431 Lupinus albus HOM05D004894 ORTHO05D005689 1.1e-10 70.9 187 33.7
Medtr6g037940 Medicago truncatula HOM05D004894 ORTHO05D005689 1.1e-10 70.9 171 25.7
Lalb_Chr03g0035421 Lupinus albus HOM05D004894 ORTHO05D005689 1.5e-10 70.5 187 34.2
RcHm_v2.0_Chr6g0274541 Rosa chinensis HOM05D004894 ORTHO05D009560 7.3e-10 68.2 175 30.9
MD10G1032600 Malus domestica HOM05D004894 ORTHO05D005689 1.6e-09 67.0 162 29.0
TPR.G36349 Trifolium pratense HOM05D004894 ORTHO05D005689 1.1e-08 64.3 168 28.0
Psat7g222800 Pisum sativum HOM05D004894 ORTHO05D005689 2.4e-08 63.2 104 36.5
TPR.G4408 Trifolium pratense HOM05D004894 ORTHO05D005689 5.2e-08 62.0 176 29.0
Psat4g130720 Pisum sativum HOM05D004894 ORTHO05D005689 2.6e-07 59.7 165 30.3
MD10G1032400 Malus domestica HOM05D004894 ORTHO05D005689 3.4e-07 59.3 130 29.2
Medtr1g018130 Medicago truncatula HOM05D004894 ORTHO05D005689 5.8e-07 58.5 153 34.0
Lalb_Chr19g0130061 Lupinus albus HOM05D004894 ORTHO05D005689 1.3e-06 57.4 171 30.4
CiPaw.15G014000 Carya illinoinensis HOM05D004894 ORTHO05D005689 1.7e-06 57.0 161 28.0


User provided reference genes

Program Settings