Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g054555 Medicago truncatula HOM05D012325 ORTHO05D013858 4.1e-61 238.0 133 100.0
Psat1g065600 Pisum sativum HOM05D012325 ORTHO05D013858 3.4e-23 112.1 136 46.3
Psat5g290480 Pisum sativum HOM05D012325 ORTHO05D013858 4.4e-23 111.7 136 46.3
Psat0s1031g0040 Pisum sativum HOM05D012325 ORTHO05D013858 3.1e-21 105.5 136 44.9
Psat4g034920 Pisum sativum HOM05D012325 ORTHO05D013858 5.4e-21 104.8 132 46.2
TPR.G103 Trifolium pratense HOM05D012325 ORTHO05D013858 4.5e-20 101.7 131 42.7
Psat3g016760 Pisum sativum HOM05D012325 ORTHO05D013858 2.3e-19 99.4 131 45.0
Medtr1g043700 Medicago truncatula HOM05D012325 ORTHO05D013858 2.3e-16 89.4 138 44.9
COL.COLO4_19395 Corchorus olitorius HOM05D000004 ORTHO05D000002 4.5e-12 75.1 155 31.0
COL.COLO4_08404 Corchorus olitorius HOM05D000004 ORTHO05D000002 2.9e-11 72.4 141 34.0
ECA232G0982 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.9e-10 69.7 53 49.1
ECA238G4401 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.9e-10 69.7 50 54.0
Lalb_Chr06g0168691 Lupinus albus HOM05D000004 ORTHO05D000002 1.9e-10 69.7 126 31.0
ECA234G2434 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.5e-10 69.3 129 31.0
Psat6g063720 Pisum sativum HOM05D012325 ORTHO05D013858 2.5e-10 69.3 49 65.3
COL.COLO4_12903 Corchorus olitorius HOM05D000004 ORTHO05D000002 4.3e-10 68.6 146 32.2
ECA246G0443 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.3e-10 68.6 53 49.1
ECA236G3521 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.6e-10 68.2 120 33.3
ECA240G3042 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.6e-10 68.2 120 33.3
COL.COLO4_20202 Corchorus olitorius HOM05D000004 ORTHO05D000002 1.2e-09 67.0 118 35.6
ECA232G1984 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.1e-09 66.2 53 47.2
ECA246G3805 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.6e-09 65.5 53 47.2
COL.COLO4_19237 Corchorus olitorius HOM05D000004 ORTHO05D000002 1.8e-08 63.2 51 56.9
ECA232G0168 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.8e-08 63.2 50 50.0
ECA240G2607 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.1e-08 62.4 50 46.0
ECA246G1501 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.0e-08 62.0 50 44.0
COL.COLO4_20628 Corchorus olitorius HOM05D000004 ORTHO05D000002 5.2e-08 61.6 146 31.5
Psat0s1551g0120 Pisum sativum HOM05D000004 ORTHO05D000002 5.2e-08 61.6 50 52.0
Psat3g197960 Pisum sativum HOM05D000004 ORTHO05D000002 5.2e-08 61.6 50 52.0
COL.COLO4_04208 Corchorus olitorius HOM05D037185 ORTHO05D000002 6.8e-08 61.2 158 29.1
Psat4g198400 Pisum sativum HOM05D000004 ORTHO05D000002 1.5e-07 60.1 50 48.0
COL.COLO4_05398 Corchorus olitorius HOM05D000004 ORTHO05D000002 2.0e-07 59.7 149 31.5
ECA232G3463 Erigeron canadensis HOM05D000924 ORTHO05D001209 2.0e-07 59.7 50 50.0
Psat1g012480 Pisum sativum HOM05D000004 ORTHO05D000002 2.6e-07 59.3 50 48.0
COL.COLO4_28963 Corchorus olitorius HOM05D000004 ORTHO05D000002 3.4e-07 58.9 135 31.1
ECA247G3996 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.4e-07 58.9 50 46.0
Psat6g169440 Pisum sativum HOM05D012325 ORTHO05D013858 3.4e-07 58.9 53 47.2
Psat6g169480 Pisum sativum HOM05D028757 ORTHO05D000002 3.4e-07 58.9 53 47.2
COL.COLO4_06470 Corchorus olitorius HOM05D000004 ORTHO05D000002 4.4e-07 58.5 53 50.9
Lalb_Chr10g0106841 Lupinus albus HOM05D000004 ORTHO05D013858 1.3e-06 57.0 49 49.0
Psat5g253800 Pisum sativum HOM05D000004 ORTHO05D000002 1.3e-06 57.0 50 48.0
QL10p043279 Quercus lobata HOM05D000004 ORTHO05D000002 1.3e-06 57.0 138 31.2
Atru.chr1.2388 Acer truncatum HOM05D000004 ORTHO05D000002 1.7e-06 56.6 51 47.1
COL.COLO4_22673 Corchorus olitorius HOM05D000004 ORTHO05D000002 2.2e-06 56.2 53 45.3
Psat2g165880 Pisum sativum HOM05D000004 ORTHO05D000002 2.2e-06 56.2 123 31.7
TPR.G7895 Trifolium pratense HOM05D000004 ORTHO05D000048 2.9e-06 55.8 113 28.3
Hma1.2p1_0812F.1_g222280 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 3.7e-06 55.5 50 42.0
PSO478G1777 Papaver somniferum HOM05D000004 ORTHO05D000002 3.7e-06 55.5 52 38.5
Psat2g127640 Pisum sativum HOM05D000004 ORTHO05D000002 3.7e-06 55.5 50 46.0
Atru.chr4.870 Acer truncatum HOM05D000004 ORTHO05D000002 4.9e-06 55.1 48 45.8
PSO063G4877 Papaver somniferum HOM05D000004 ORTHO05D000002 4.9e-06 55.1 49 40.8
PSO832G3207 Papaver somniferum HOM05D000004 ORTHO05D000002 4.9e-06 55.1 52 38.5
Psat0s3835g0040 Pisum sativum HOM05D000004 ORTHO05D000002 4.9e-06 55.1 50 46.0
TPR.G6049 Trifolium pratense HOM05D012325 ORTHO05D013858 4.9e-06 55.1 50 44.0
TPR.G27313 Trifolium pratense HOM05D000004 ORTHO05D000002 6.4e-06 54.7 50 44.0
TWI31G1488 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 6.4e-06 54.7 50 44.0
TWI34G0287 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 6.4e-06 54.7 50 44.0
TWI38G0029 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 6.4e-06 54.7 50 44.0
TWI39G0003 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 6.4e-06 54.7 50 44.0
TWI81G0785 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 6.4e-06 54.7 50 44.0
SHI44582 Sapria himalayana HOM05D000004 ORTHO05D000002 8.3e-06 54.3 49 46.9
TAR643G0001 Trochodendron aralioides HOM05D000004 ORTHO05D000002 8.3e-06 54.3 53 37.7


User provided reference genes

Program Settings