Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g053520 Medicago truncatula HOM05D006621 ORTHO05D008425 2.7e-308 1061.2 565 100.0
Ca_26117_v3 Cicer arietinum L. HOM05D006621 ORTHO05D008425 4.7e-284 980.7 565 91.7
TPR.G24898 Trifolium pratense HOM05D006621 ORTHO05D008425 3.4e-282 974.5 565 91.9
Lj5g0023768 Lotus japonicus HOM05D006621 ORTHO05D008425 4.6e-255 884.4 565 82.8
Glyma.02G176900 Glycine max HOM05D006621 ORTHO05D008425 2.0e-250 869.0 565 81.2
arahy.Tifrunner.gnm1.ann1.G78CS5 Arachis hypogaea HOM05D006621 ORTHO05D008425 1.4e-248 862.8 565 81.2
Lalb_Chr21g0317041 Lupinus albus HOM05D006621 ORTHO05D008425 1.7e-246 855.9 565 81.4
Glyma.10G091600 Glycine max HOM05D006621 ORTHO05D008425 1.9e-245 852.4 566 80.6
Phvul.007G257900 Phaseolus vulgaris HOM05D006621 ORTHO05D008425 9.6e-245 850.1 565 80.4
VMungo0720G2363 Vigna mungo HOM05D006621 ORTHO05D008425 5.3e-243 844.3 565 79.3
arahy.Tifrunner.gnm1.ann1.ZJT11U Arachis hypogaea HOM05D006621 ORTHO05D008425 2.7e-239 832.0 637 72.1
Psat6g126120 Pisum sativum HOM05D006621 ORTHO05D008425 1.7e-233 812.8 503 86.1
QL07p023160 Quercus lobata HOM05D006621 ORTHO05D008425 6.5e-225 784.3 570 73.7
MD14G1060600 Malus domestica HOM05D006621 ORTHO05D008425 2.1e-220 769.2 565 73.1
FAN02G3731 Fragaria x ananassa HOM05D006621 ORTHO05D008425 2.8e-220 768.8 568 73.1
Thecc.05G168600 Theobroma cacao HOM05D006621 ORTHO05D008425 1.4e-219 766.5 571 72.2
COL.COLO4_36135 Corchorus olitorius HOM05D006621 ORTHO05D008425 3.1e-219 765.4 571 72.0
FAN09G2006 Fragaria x ananassa HOM05D006621 ORTHO05D008425 2.0e-218 762.7 568 72.5
CiPaw.09G032000 Carya illinoinensis HOM05D006621 ORTHO05D008425 5.9e-218 761.1 570 72.3
FvH4_6g22670 Fragaria vesca HOM05D006621 ORTHO05D008425 5.9e-218 761.1 568 72.0
RcHm_v2.0_Chr3g0480241 Rosa chinensis HOM05D006621 ORTHO05D008425 5.9e-218 761.1 565 71.3
Eucgr.K01826 Eucalyptus grandis HOM05D006621 ORTHO05D008425 1.0e-217 760.4 569 72.2
FAN05G4150 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.0e-217 760.4 568 72.4
Atru.chr8.1052 Acer truncatum HOM05D006621 ORTHO05D008425 1.7e-217 759.6 571 70.8
Manes.09G032200 Manihot esculenta HOM05D006621 ORTHO05D008425 2.2e-217 759.2 571 69.9
Cfa016900 Carpinus fangiana HOM05D006621 ORTHO05D008425 5.0e-217 758.1 558 72.0
Potri.006G059500 Populus trichocarpa HOM05D006621 ORTHO05D008425 5.0e-217 758.1 571 69.4
Dinv24092 Davidia involucrata HOM05D006621 ORTHO05D008425 1.1e-216 756.9 572 70.6
Duzib128G0108 Durio zibethinus HOM05D006621 ORTHO05D008425 2.1e-215 752.7 571 71.3
Sabra06G0042800 Salix brachista HOM05D006621 ORTHO05D008425 3.6e-215 751.9 576 69.4
PGR142G0547 Punica granatum HOM05D006621 ORTHO05D008425 6.1e-215 751.1 568 69.5
FAN14G1344 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.8e-214 749.6 583 70.0
Gohir.D09G123264 Gossypium hirsutum HOM05D006621 ORTHO05D008425 1.8e-214 749.6 568 70.2
Gorai.006G141700 Gossypium raimondii HOM05D006621 ORTHO05D008425 2.3e-214 749.2 568 70.2
GSVIVG01033523001 Vitis vinifera HOM05D006621 ORTHO05D008425 8.7e-214 747.3 565 70.3
Haze_19963 Corylus avellana HOM05D006621 ORTHO05D008425 1.5e-213 746.5 553 71.8
Gohir.A09G126800 Gossypium hirsutum HOM05D006621 ORTHO05D008425 1.5e-213 746.5 570 70.2
FAN14G0291 Fragaria x ananassa HOM05D006621 ORTHO05D008425 9.7e-213 743.8 568 71.3
TWI74G0211 Tripterygium wilfordii HOM05D006621 ORTHO05D008425 2.8e-212 742.3 566 71.2
Ciclev10011385m.g Citrus clementina HOM05D006621 ORTHO05D008425 2.0e-210 736.1 570 68.9
CSS0004967 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D008425 4.6e-207 724.9 573 67.9
Actinidia38574 Actinidia chinensis HOM05D006621 ORTHO05D008425 7.9e-207 724.2 567 68.3
ClCG04G002310 Citrullus lanatus HOM05D006621 ORTHO05D008425 3.9e-206 721.8 565 68.0
CANSAT64G2439 Cannabis sativa HOM05D006621 ORTHO05D008425 2.6e-205 719.2 570 70.2
CsaV3_4G030430 Cucumis sativus L. HOM05D006621 ORTHO05D008425 9.7e-205 717.2 566 67.5
MELO3C008903.2 Cucumis melo HOM05D006621 ORTHO05D008425 1.7e-204 716.5 566 68.6
Hma1.2p1_0005F.1_g004290 Hydrangea macrophylla HOM05D006621 ORTHO05D008425 8.2e-204 714.1 568 68.5
Rhsim04G0097900 Rhododendron simsii HOM05D006621 ORTHO05D008425 5.3e-203 711.4 590 64.4
Sed0013147 Sechium edule HOM05D006621 ORTHO05D008425 2.0e-202 709.5 565 67.1
Nn1g01946 Nelumbo nucifera HOM05D006621 ORTHO05D008425 1.0e-201 707.2 571 66.0
PSO339G6474 Papaver somniferum HOM05D006621 ORTHO05D008425 3.2e-200 702.2 568 65.0
Lju124A29T46 Lonicera japonica HOM05D006621 ORTHO05D008425 4.7e-199 698.4 570 66.8
THA.LOC104799308 Tarenaya hassleriana HOM05D006621 ORTHO05D008425 4.7e-199 698.4 570 66.0
PSO384G1846 Papaver somniferum HOM05D006621 ORTHO05D008425 1.1e-197 693.7 568 65.0
Cc00_g14610 Coffea canephora HOM05D006621 ORTHO05D008425 9.7e-197 690.6 567 64.0
Nitab4.5_0000016g0290 Nicotiana tabacum HOM05D006621 ORTHO05D008425 3.1e-195 685.6 565 64.6
MSTRG.6466 Avicennia marina HOM05D006621 ORTHO05D008425 2.0e-194 682.9 575 64.9
Oeu008113.1 Olea europaea HOM05D006621 ORTHO05D008425 2.2e-193 679.5 568 66.5
Prupe.7G073900 Prunus persica HOM05D006621 ORTHO05D008425 2.9e-193 679.1 564 66.7
Hund19192 Selenicereus undatus HOM05D006621 ORTHO05D008425 2.9e-193 679.1 587 61.8
Aqoxy1G00197 Aquilegia oxysepala HOM05D006621 ORTHO05D008425 4.2e-192 675.2 570 63.0
Sp6g36030 Schrenkiella parvula HOM05D006621 ORTHO05D008425 4.2e-192 675.2 565 63.2
CAN.G691.11 Capsicum annuum HOM05D006621 ORTHO05D008425 9.4e-192 674.1 568 64.1
Thhalv10013160m.g Eutrema salsugineum HOM05D006621 ORTHO05D008425 1.2e-191 673.7 568 62.5
AT5G06830 Arabidopsis thaliana HOM05D006621 ORTHO05D008425 2.7e-191 672.5 568 63.2
EL10Ac3g06943 Beta vulgaris HOM05D006621 ORTHO05D008425 2.7e-191 672.5 561 64.5
CARHR206340 Cardamine hirsuta HOM05D006621 ORTHO05D008425 1.0e-190 670.6 565 62.7
BcaC06g32538 Brassica carinata HOM05D006621 ORTHO05D008425 1.8e-190 669.8 566 62.7
HanXRQChr01g0009671 Helianthus annuus HOM05D006621 ORTHO05D008425 3.0e-190 669.1 566 64.1
ECA248G1459 Erigeron canadensis HOM05D006621 ORTHO05D008425 2.6e-189 666.0 561 63.3
Lsat_1_v5_gn_5_164180 Lactuca sativa HOM05D006621 ORTHO05D008425 2.6e-189 666.0 560 64.8
Sopen03g013060 Solanum pennellii HOM05D006621 ORTHO05D008425 3.3e-189 665.6 565 63.0
Carub.0006s0572 Capsella rubella HOM05D006621 ORTHO05D008425 4.4e-189 665.2 566 62.9
AL6G16950 Arabidopsis lyrata HOM05D006621 ORTHO05D008425 5.7e-189 664.8 568 62.7
Sc13g0002140 Simmondsia chinensis HOM05D006621 ORTHO05D008425 3.1e-187 659.1 568 63.0
Ah.13g076080 Amaranthus hybridus HOM05D006621 ORTHO05D008425 9.1e-187 657.5 568 62.3
Aa31LG11G7690 Aethionema arabicum HOM05D006621 ORTHO05D008425 3.8e-185 652.1 565 61.8
Migut.J01819 Erythranthe guttata HOM05D006621 ORTHO05D008425 1.9e-184 649.8 566 62.2
SalBow6G6334 Salvia bowleyana HOM05D006621 ORTHO05D008425 4.7e-183 645.2 567 62.6
ATR0605G120 Amborella trichopoda HOM05D006621 ORTHO05D008425 3.5e-178 629.0 570 60.2
vmacro09106 Vaccinium macrocarpon HOM05D006621 ORTHO05D008425 3.5e-178 629.0 529 65.4
A10p29540 Brassica napus HOM05D006621 ORTHO05D008425 1.1e-176 624.0 565 59.8
BraA10t44997Z Brassica rapa HOM05D006621 ORTHO05D008425 1.1e-176 624.0 565 59.8
BcaC06g32399 Brassica carinata HOM05D006621 ORTHO05D008425 7.2e-176 621.3 565 59.6
BolC9t59734H Brassica oleracea HOM05D006621 ORTHO05D008425 7.2e-176 621.3 565 59.6
C09p69910 Brassica napus HOM05D006621 ORTHO05D008425 2.1e-175 619.8 565 59.5
Os06g0320100 Oryza sativa ssp. japonica HOM05D006621 ORTHO05D008425 6.1e-175 618.2 573 59.7
AUR62024325 Chenopodium quinoa HOM05D006621 ORTHO05D008425 2.6e-173 612.8 578 58.8
AUR62012064 Chenopodium quinoa HOM05D006621 ORTHO05D008425 3.4e-173 612.5 540 62.0
Zm00001eb381660 Zea mays HOM05D006621 ORTHO05D008425 3.4e-173 612.5 633 55.8
HPP92_015468 Vanilla planifolia HOM05D006621 ORTHO05D008425 9.8e-173 610.9 579 57.7
Nitab4.5_0003572g0080 Nicotiana tabacum HOM05D006621 ORTHO05D008425 1.3e-169 600.5 565 58.4
CDE10G0898 Ceratophyllum demersum HOM05D006621 ORTHO05D008425 3.4e-165 585.9 566 56.0
Peaxi162Scf00258g00117 Petunia axillaris HOM05D006621 ORTHO05D008425 5.4e-155 552.0 488 60.5
unitig_27.g25079 Utricularia gibba HOM05D006621 ORTHO05D008425 3.5e-154 549.3 522 59.2
Cpa.g.sc85.87 Carica papaya HOM05D006621 ORTHO05D008425 1.7e-140 503.8 407 63.6
Zm00001eb381720 Zea mays HOM05D006621 ORTHO05D008425 5.6e-128 462.2 448 59.6
AagrBONN_evm.TU.Sc2ySwM_228.2467 Anthoceros agrestis HOM05D006621 ORTHO05D008425 2.9e-116 423.3 554 43.9
Mapoly0080s0041 Marchantia polymorpha HOM05D006621 ORTHO05D008425 3.2e-115 419.9 588 41.5
Eucgr.D02420 Eucalyptus grandis HOM05D006621 ORTHO05D008425 1.6e-111 407.5 411 58.4
Pp3c23_21740 Physcomitrium patens HOM05D006621 ORTHO05D008425 6.9e-102 375.6 583 38.4
MD12G1060300 Malus domestica HOM05D006621 ORTHO05D008425 9.3e-99 365.2 224 80.8
TAR636G0143 Trochodendron aralioides HOM05D006621 ORTHO05D008425 1.5e-96 357.8 235 77.0
TAR636G2274 Trochodendron aralioides HOM05D006621 ORTHO05D008425 1.7e-95 354.4 308 67.9
CBR_g3749 Chara braunii HOM05D006621 ORTHO05D008425 4.8e-95 352.8 592 36.8
SMO134G0088 Selaginella moellendorffii HOM05D006621 ORTHO05D008425 4.1e-94 349.7 561 38.9
MD12G1060400 Malus domestica HOM05D006621 ORTHO05D008425 4.1e-86 323.2 257 70.4
Solyc03g059030.4 Solanum lycopersicum HOM05D006621 ORTHO05D008425 1.0e-84 318.5 292 62.3
DCAR_019796 Daucus carota HOM05D006621 ORTHO05D008425 7.0e-70 269.2 275 54.9
SEGI_27578 Sequoiadendron giganteum HOM05D006621 ORTHO05D008425 6.1e-66 256.1 236 56.4
Lsat_1_v5_gn_1_107121 Lactuca sativa HOM05D006621 ORTHO05D008425 3.8e-60 236.9 372 45.7
CAN.G654.6 Capsicum annuum HOM05D006621 ORTHO05D008425 1.8e-54 218.0 151 75.5
Oeu033745.1 Olea europaea HOM05D006621 ORTHO05D008425 1.5e-51 208.4 203 59.1
Cre01.g047229 Chlamydomonas reinhardtii HOM05D006621 ORTHO05D008425 1.9e-51 208.0 591 27.7
RcHm_v2.0_Chr3g0476251 Rosa chinensis HOM05D006621 ORTHO05D008425 1.9e-38 164.9 157 63.7
Lsat_1_v5_gn_5_170341 Lactuca sativa HOM05D006621 ORTHO05D008425 1.7e-31 141.7 151 53.0
FAN02G0678 Fragaria x ananassa HOM05D006621 ORTHO05D008425 2.8e-26 124.4 71 78.9
CSS0033542 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D043305 9.3e-14 82.8 54 79.6
DCAR_028612 Daucus carota HOM05D006621 ORTHO05D008425 8.1e-10 69.7 69 56.5


User provided reference genes

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