Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g051695 Medicago truncatula HOM05D007291 ORTHO05D009038 2.0e-103 379.0 185 100.0
TPR.G8243 Trifolium pratense HOM05D007291 ORTHO05D009038 1.1e-29 134.0 139 56.1
Medtr1g037260 Medicago truncatula HOM05D007291 ORTHO05D009038 4.8e-28 128.6 139 54.7
Medtr1g036840 Medicago truncatula HOM05D007291 ORTHO05D009038 1.4e-27 127.1 180 47.2
Ca_00776_v3 Cicer arietinum L. HOM05D000091 ORTHO05D009038 2.5e-24 116.3 142 49.3
Psat6g098880 Pisum sativum HOM05D007291 ORTHO05D009038 2.1e-23 113.2 144 48.6
Ca_26721_v3 Cicer arietinum L. HOM05D007291 ORTHO05D009038 4.7e-23 112.1 141 47.5
Glyma.09G282100 Glycine max HOM05D007291 ORTHO05D009038 1.2e-21 107.5 184 38.0
Lj2g0016301 Lotus japonicus HOM05D007291 ORTHO05D009038 2.0e-21 106.7 205 36.1
VMungo1383G1759 Vigna mungo HOM05D003919 ORTHO05D009038 2.4e-19 99.8 173 38.7
CSS0009024 Camellia sinensis var. sinensis HOM05D007956 ORTHO05D009038 2.7e-18 96.3 185 34.1
Medtr1g037080 Medicago truncatula HOM05D007291 ORTHO05D009038 3.8e-17 92.4 152 44.1
Lalb_Chr02g0154661 Lupinus albus HOM05D007291 ORTHO05D009038 8.0e-15 84.7 122 44.3
arahy.Tifrunner.gnm1.ann1.HW3SC4 Arachis hypogaea HOM05D007291 ORTHO05D009038 1.0e-14 84.3 136 39.0
Cc07_g13560 Coffea canephora HOM05D007291 ORTHO05D009038 1.0e-14 84.3 164 36.6
Phvul.003G005900 Phaseolus vulgaris HOM05D007291 ORTHO05D009038 6.8e-14 81.6 189 33.9
Nitab4.5_0004679g0050 Nicotiana tabacum HOM05D007291 ORTHO05D009038 9.8e-13 77.8 171 31.6
Medtr1g036780 Medicago truncatula HOM05D007291 ORTHO05D009038 9.1e-11 71.2 51 74.5
Migut.H01009 Erythranthe guttata HOM05D007291 ORTHO05D009038 1.2e-10 70.9 182 29.1
MSTRG.10708 Avicennia marina HOM05D007291 ORTHO05D009038 4.5e-10 68.9 134 35.8
CARHR058230 Cardamine hirsuta HOM05D007291 ORTHO05D009038 1.3e-09 67.4 139 28.8
HanXRQChr14g0444491 Helianthus annuus HOM05D007291 ORTHO05D009038 2.3e-09 66.6 133 34.6
Ah.14g088580 Amaranthus hybridus HOM05D007291 ORTHO05D009038 2.9e-09 66.2 127 37.0
Medtr3g448890 Medicago truncatula HOM05D007291 ORTHO05D009038 2.9e-09 66.2 110 41.8
Medtr0006s0260 Medicago truncatula HOM05D007291 ORTHO05D009038 3.8e-09 65.9 63 60.3
FAN04G0610 Fragaria x ananassa HOM05D007291 ORTHO05D009038 1.5e-08 63.9 121 36.4
CiPaw.01G118600 Carya illinoinensis HOM05D007291 ORTHO05D009038 2.5e-08 63.2 111 36.0
Nitab4.5_0007769g0010 Nicotiana tabacum HOM05D007291 ORTHO05D009038 2.5e-08 63.2 130 32.3
AUR62012554 Chenopodium quinoa HOM05D007291 ORTHO05D009038 3.2e-08 62.8 123 35.0
SGA_v2.0_scaffold159G37611 Striga asiatica HOM05D007291 ORTHO05D009038 3.2e-08 62.8 134 29.9
Oeu032258.1 Olea europaea HOM05D007291 ORTHO05D009038 9.5e-08 61.2 121 32.2
unitig_21.g20398 Utricularia gibba HOM05D007291 ORTHO05D009038 2.1e-07 60.1 180 26.1
Sc03g0007430 Simmondsia chinensis HOM05D000068 ORTHO05D004691 2.3e-06 56.6 108 34.3
Medtr1g050145 Medicago truncatula HOM05D007291 ORTHO05D009038 6.8e-06 55.1 53 60.4
TWI74G1032 Tripterygium wilfordii HOM05D007291 ORTHO05D009038 6.8e-06 55.1 111 33.3


User provided reference genes

Program Settings