Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g050435 Medicago truncatula HOM05D000497 ORTHO05D002300 5.7e-127 457.6 233 100.0
Medtr1g110970 Medicago truncatula HOM05D000497 ORTHO05D002300 9.6e-74 280.8 187 78.6
Medtr1g105400 Medicago truncatula HOM05D000497 ORTHO05D002300 1.8e-64 250.0 172 73.8
Medtr8g023700 Medicago truncatula HOM05D000245 ORTHO05D002300 3.0e-59 232.6 188 68.1
Medtr8g023680 Medicago truncatula HOM05D000497 ORTHO05D002300 1.4e-56 223.8 197 63.5
Psat6g228760 Pisum sativum HOM05D000245 ORTHO05D002300 4.2e-53 212.2 169 69.2
Ca_11177_v3 Cicer arietinum L. HOM05D000497 ORTHO05D002300 4.8e-33 145.6 183 51.4
TPR.G26276 Trifolium pratense HOM05D000497 ORTHO05D002300 3.1e-32 142.9 175 52.0
Ca_20705_v3 Cicer arietinum L. HOM05D000497 ORTHO05D002300 6.1e-28 128.6 171 48.5
Ca_11804_v3 Cicer arietinum L. HOM05D000497 ORTHO05D002300 2.3e-27 126.7 171 48.5
Glyma.20G115300 Glycine max HOM05D000497 ORTHO05D002300 6.3e-25 118.6 211 42.7
Glyma.10G274600 Glycine max HOM05D000497 ORTHO05D002300 1.1e-24 117.9 197 44.2
Glyma.08G149200 Glycine max HOM05D000497 ORTHO05D002300 3.1e-24 116.3 192 46.4
Phvul.007G027000 Phaseolus vulgaris HOM05D000497 ORTHO05D002300 1.5e-23 114.0 198 43.9
Lalb_Chr06g0166131 Lupinus albus HOM05D000497 ORTHO05D002300 1.3e-22 110.9 190 41.6
Lalb_Chr21g0308961 Lupinus albus HOM05D000497 ORTHO05D002300 5.5e-21 105.5 208 41.3
Lalb_Chr02g0146021 Lupinus albus HOM05D000497 ORTHO05D002300 1.2e-20 104.4 150 46.0
VMungo0720G1796 Vigna mungo HOM05D000497 ORTHO05D002300 1.8e-19 100.5 177 41.8
arahy.Tifrunner.gnm1.ann1.VG3SGX Arachis hypogaea HOM05D000497 ORTHO05D002300 4.1e-16 89.4 156 40.4
Lalb_Chr04g0254741 Lupinus albus HOM05D000497 ORTHO05D002300 1.2e-15 87.8 185 36.2
Phvul.003G035500 Phaseolus vulgaris HOM05D000497 ORTHO05D002300 2.6e-15 86.7 159 43.4
Lj5g0018780 Lotus japonicus HOM05D000497 ORTHO05D002300 3.5e-15 86.3 172 41.3
MD16G1043500 Malus domestica HOM05D000497 ORTHO05D002300 1.3e-14 84.3 179 33.5
Lj2g0001611 Lotus japonicus HOM05D000497 ORTHO05D002300 2.9e-14 83.2 147 41.5
MD13G1042600 Malus domestica HOM05D000497 ORTHO05D002300 3.8e-14 82.8 167 35.3
VMungo1215G1687 Vigna mungo HOM05D000497 ORTHO05D002300 5.0e-14 82.4 175 39.4
Actinidia16648 Actinidia chinensis HOM05D000497 ORTHO05D002300 2.5e-13 80.1 188 36.7
Lalb_Chr17g0342111 Lupinus albus HOM05D000497 ORTHO05D002300 3.2e-13 79.7 182 35.7
Glyma.01G081100 Glycine max HOM05D000497 ORTHO05D002300 4.2e-13 79.3 171 37.4
Lalb_Chr10g0099991 Lupinus albus HOM05D000497 ORTHO05D002300 2.1e-12 77.0 183 38.3
QL01p043151 Quercus lobata HOM05D000497 ORTHO05D002300 6.1e-12 75.5 185 36.2
Prupe.1G310100 Prunus persica HOM05D000497 ORTHO05D002300 2.3e-11 73.6 184 33.2
Actinidia14886 Actinidia chinensis HOM05D000497 ORTHO05D002300 1.5e-10 70.9 174 34.5
TAR371G0755 Trochodendron aralioides HOM05D000497 ORTHO05D002300 1.5e-10 70.9 154 35.1
Rhsim09G0108500 Rhododendron simsii HOM05D000497 ORTHO05D002300 2.6e-10 70.1 161 35.4
FAN07G1058 Fragaria x ananassa HOM05D000497 ORTHO05D002300 7.5e-10 68.6 197 32.0
FAN07G1594 Fragaria x ananassa HOM05D000497 ORTHO05D002300 7.5e-10 68.6 197 32.0
FvH4_4g27491 Fragaria vesca HOM05D000497 ORTHO05D002300 1.3e-09 67.8 197 32.0
Glyma.08G261500 Glycine max HOM05D000497 ORTHO05D002300 3.7e-09 66.2 170 36.5
Cfa018601 Carpinus fangiana HOM05D000497 ORTHO05D002300 4.8e-09 65.9 145 35.9
vmacro01378 Vaccinium macrocarpon HOM05D000497 ORTHO05D002300 4.8e-09 65.9 153 34.6
RcHm_v2.0_Chr4g0435261 Rosa chinensis HOM05D000497 ORTHO05D002300 8.2e-09 65.1 144 34.0
Thecc.02G355700 Theobroma cacao HOM05D000497 ORTHO05D002300 1.4e-08 64.3 130 40.0
TAR371G0284 Trochodendron aralioides HOM05D000497 ORTHO05D002300 1.4e-08 64.3 154 33.1
TAR374G0492 Trochodendron aralioides HOM05D000497 ORTHO05D002300 2.4e-08 63.5 171 32.7
Sed0012392 Sechium edule HOM05D000497 ORTHO05D002300 4.1e-08 62.8 70 47.1
PSO017G6631 Papaver somniferum HOM05D000245 ORTHO05D002300 5.3e-08 62.4 188 29.8
Cc11_g10210 Coffea canephora HOM05D000497 ORTHO05D002300 9.1e-08 61.6 173 33.5
Glyma.17G170100 Glycine max HOM05D000497 ORTHO05D002300 9.1e-08 61.6 60 56.7
Rhsim12G0083300 Rhododendron simsii HOM05D000497 ORTHO05D002300 1.6e-07 60.8 178 32.6
Haze_17476 Corylus avellana HOM05D000497 ORTHO05D002300 2.0e-07 60.5 156 32.1
TAR622G1395 Trochodendron aralioides HOM05D000497 ORTHO05D002300 2.2e-06 57.0 168 33.3
Sed0001080 Sechium edule HOM05D000497 ORTHO05D002300 3.8e-06 56.2 166 28.9
PSO478G4044 Papaver somniferum HOM05D000245 ORTHO05D002300 6.5e-06 55.5 190 29.5
Lj3g0020914 Lotus japonicus HOM05D000497 ORTHO05D002300 8.5e-06 55.1 132 36.4


User provided reference genes

Program Settings