Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g050318 Medicago truncatula HOM05D000231 ORTHO05D011714 1.6e-203 712.6 372 100.0
Medtr2g081170 Medicago truncatula HOM05D000231 ORTHO05D011714 1.1e-42 178.3 277 41.5
Psat5g247440 Pisum sativum HOM05D000231 ORTHO05D011714 1.4e-42 177.9 266 39.1
Ca_01796_v3 Cicer arietinum L. HOM05D000231 ORTHO05D011714 5.3e-42 176.0 287 39.0
TPR.G32872 Trifolium pratense HOM05D000231 ORTHO05D011714 1.7e-40 171.0 261 40.6
Psat5g247480 Pisum sativum HOM05D000231 ORTHO05D011714 2.7e-38 163.7 272 38.6
TPR.G18166 Trifolium pratense HOM05D000231 ORTHO05D011714 8.7e-37 158.7 259 38.6
Lalb_Chr20g0110061 Lupinus albus HOM05D000231 ORTHO05D011714 1.3e-32 144.8 257 37.0
VMungo1080G1678 Vigna mungo HOM05D000231 ORTHO05D011714 3.8e-32 143.3 259 36.3
TPR.G29185 Trifolium pratense HOM05D018228 ORTHO05D011714 1.9e-31 141.0 273 36.6
Glyma.12G218000 Glycine max HOM05D000231 ORTHO05D011714 6.1e-30 136.0 274 32.8
Lalb_Chr25g0286851 Lupinus albus HOM05D000231 ORTHO05D011714 1.1e-23 115.2 303 30.4
TPR.G32849 Trifolium pratense HOM05D000231 ORTHO05D011714 1.8e-21 107.8 135 44.4
Phvul.005G087500 Phaseolus vulgaris HOM05D000231 ORTHO05D011714 5.2e-21 106.3 213 35.2
TPR.G32883 Trifolium pratense HOM05D002265 ORTHO05D011714 6.7e-21 105.9 257 33.1
Medtr8g013025 Medicago truncatula HOM05D001592 ORTHO05D011714 8.8e-21 105.5 154 42.9
Potri.011G040900 Populus trichocarpa HOM05D000231 ORTHO05D000132 2.9e-16 90.5 247 29.6
Sabra11G0027800 Salix brachista HOM05D000231 ORTHO05D000132 5.0e-16 89.7 245 28.6
TAR624G0649 Trochodendron aralioides HOM05D000231 ORTHO05D000132 5.0e-16 89.7 243 26.7
Duzib235G0444 Durio zibethinus HOM05D000231 ORTHO05D000132 1.5e-15 88.2 250 27.2
COL.COLO4_31634 Corchorus olitorius HOM05D000231 ORTHO05D000132 3.2e-15 87.0 243 25.9
MD05G1327100 Malus domestica HOM05D000231 ORTHO05D000132 3.2e-15 87.0 252 27.0
QL05p080770 Quercus lobata HOM05D000231 ORTHO05D000132 4.2e-15 86.7 256 27.7
TAR626G0142 Trochodendron aralioides HOM05D000231 ORTHO05D000132 7.2e-15 85.9 241 26.6
Nn1g03831 Nelumbo nucifera HOM05D000231 ORTHO05D000132 1.2e-14 85.1 225 30.7
Duzib192G0055 Durio zibethinus HOM05D000231 ORTHO05D000132 2.7e-14 84.0 243 25.5
Gohir.D05G169600 Gossypium hirsutum HOM05D000231 ORTHO05D000132 2.7e-14 84.0 247 27.5
Gorai.009G174800 Gossypium raimondii HOM05D000231 ORTHO05D000132 2.7e-14 84.0 247 27.5
Thecc.06G202200 Theobroma cacao HOM05D000231 ORTHO05D000132 2.7e-14 84.0 241 26.6
Gohir.A05G166600 Gossypium hirsutum HOM05D000231 ORTHO05D000132 3.6e-14 83.6 271 26.6
CSS0045736 Camellia sinensis var. sinensis HOM05D000231 ORTHO05D011714 4.7e-14 83.2 214 27.6
Lj2C279T1 Lonicera japonica HOM05D000231 ORTHO05D000132 6.1e-14 82.8 252 27.4
Cfa000336 Carpinus fangiana HOM05D000231 ORTHO05D000132 1.4e-13 81.6 259 27.0
Potri.004G032100 Populus trichocarpa HOM05D000231 ORTHO05D000132 2.3e-13 80.9 216 28.7
CSS0014358 Camellia sinensis var. sinensis HOM05D000231 ORTHO05D011714 4.0e-13 80.1 212 25.9
RcHm_v2.0_Chr5g0005771 Rosa chinensis HOM05D000231 ORTHO05D000132 4.0e-13 80.1 245 24.9
Sabra04G0018300 Salix brachista HOM05D000231 ORTHO05D000132 5.2e-13 79.7 248 26.2
Gohir.A10G019300 Gossypium hirsutum HOM05D000231 ORTHO05D000132 1.5e-12 78.2 254 25.2
Nn1g06823 Nelumbo nucifera HOM05D000231 ORTHO05D000132 1.5e-12 78.2 219 28.3
CANSAT56G0908 Cannabis sativa HOM05D000231 ORTHO05D000132 3.3e-12 77.0 228 28.1
CiPaw.09G156700 Carya illinoinensis HOM05D000231 ORTHO05D000132 3.3e-12 77.0 277 24.9
Gohir.D10G020200 Gossypium hirsutum HOM05D000231 ORTHO05D000132 3.3e-12 77.0 254 25.2
CiPaw.03G167600 Carya illinoinensis HOM05D000231 ORTHO05D000132 4.4e-12 76.6 246 26.8
Lalb_Chr18g0060011 Lupinus albus HOM05D000231 ORTHO05D000132 4.4e-12 76.6 255 29.0
Dinv40464 Davidia involucrata HOM05D000231 ORTHO05D000132 5.7e-12 76.3 249 26.1
Gorai.011G021400 Gossypium raimondii HOM05D000231 ORTHO05D000132 7.5e-12 75.9 254 24.8
ATR1132G108 Amborella trichopoda HOM05D000231 ORTHO05D000132 9.7e-12 75.5 220 29.1
Ciclev10015968m.g Citrus clementina HOM05D000231 ORTHO05D000132 9.7e-12 75.5 242 24.4
GSVIVG01003674001 Vitis vinifera HOM05D000231 ORTHO05D000132 1.7e-11 74.7 243 26.7
Atru.chr10.2033 Acer truncatum HOM05D000231 ORTHO05D000132 2.2e-11 74.3 240 24.2
Nitab4.5_0001465g0060 Nicotiana tabacum HOM05D000231 ORTHO05D000132 2.8e-11 73.9 229 27.1
TPR.G32846 Trifolium pratense HOM05D000231 ORTHO05D011714 2.8e-11 73.9 116 42.2
DCAR_009711 Daucus carota HOM05D000231 ORTHO05D000132 3.7e-11 73.6 206 28.2
FvH4_3g03720 Fragaria vesca HOM05D000231 ORTHO05D000132 3.7e-11 73.6 244 23.8
Actinidia12472 Actinidia chinensis HOM05D000231 ORTHO05D000132 4.8e-11 73.2 208 28.8
Lsat_1_v5_gn_7_105920 Lactuca sativa HOM05D000231 ORTHO05D021410 6.3e-11 72.8 289 24.9
Lalb_Chr20g0122431 Lupinus albus HOM05D000231 ORTHO05D000132 6.3e-11 72.8 227 29.5
TWI38G2113 Tripterygium wilfordii HOM05D000231 ORTHO05D000132 6.3e-11 72.8 212 27.4
Lj1A1215T58 Lonicera japonica HOM05D000231 ORTHO05D000132 8.2e-11 72.4 222 25.2
FAN25G0621 Fragaria x ananassa HOM05D000231 ORTHO05D000132 1.1e-10 72.0 244 23.0
TWI18G1262 Tripterygium wilfordii HOM05D000231 ORTHO05D000132 1.1e-10 72.0 248 24.6
TWI36G1570 Tripterygium wilfordii HOM05D000231 ORTHO05D000132 1.1e-10 72.0 246 25.6
CSS0029889 Camellia sinensis var. sinensis HOM05D000231 ORTHO05D000132 1.4e-10 71.6 230 29.1
CSS0049137 Camellia sinensis var. sinensis HOM05D000231 ORTHO05D000132 1.4e-10 71.6 230 29.1
MD10G1305200 Malus domestica HOM05D000231 ORTHO05D000132 1.4e-10 71.6 192 26.6
Actinidia24051 Actinidia chinensis HOM05D000231 ORTHO05D000132 2.4e-10 70.9 282 23.8
Potri.019G118600 Populus trichocarpa HOM05D000231 ORTHO05D000132 2.4e-10 70.9 232 25.9
Gorai.010G148600 Gossypium raimondii HOM05D000231 ORTHO05D000132 3.1e-10 70.5 225 25.3
PSO832G3486 Papaver somniferum HOM05D000231 ORTHO05D000132 3.1e-10 70.5 239 26.4
GSVIVG01000451001 Vitis vinifera HOM05D000231 ORTHO05D000132 3.1e-10 70.5 195 27.2
Actinidia05150 Actinidia chinensis HOM05D018228 ORTHO05D021078 4.1e-10 70.1 238 26.1
arahy.Tifrunner.gnm1.ann1.V2AQ6U Arachis hypogaea HOM05D000231 ORTHO05D000132 4.1e-10 70.1 237 26.6
ECA248G0693 Erigeron canadensis HOM05D000231 ORTHO05D000132 4.1e-10 70.1 211 28.4
MD17G1086400 Malus domestica HOM05D000231 ORTHO05D000132 4.1e-10 70.1 224 27.2
Cfa014506 Carpinus fangiana HOM05D000231 ORTHO05D000132 5.3e-10 69.7 217 27.6
CDE02G4340 Ceratophyllum demersum HOM05D000231 ORTHO05D000132 5.3e-10 69.7 246 24.0
Nitab4.5_0003814g0020 Nicotiana tabacum HOM05D000231 ORTHO05D000132 5.3e-10 69.7 200 27.0
Peaxi162Scf00007g02126 Petunia axillaris HOM05D000231 ORTHO05D000132 5.3e-10 69.7 223 26.0
FAN09G4210 Fragaria x ananassa HOM05D000231 ORTHO05D000132 7.0e-10 69.3 228 24.1
Cpa.g.sc27.141 Carica papaya HOM05D000231 ORTHO05D000132 9.1e-10 68.9 254 25.2
Migut.M01227 Erythranthe guttata HOM05D000231 ORTHO05D000132 9.1e-10 68.9 234 26.5
MBI18_g36111_MAGBIO Magnolia biondii HOM05D000231 ORTHO05D000132 9.1e-10 68.9 215 26.0
Gohir.D04G146400 Gossypium hirsutum HOM05D000231 ORTHO05D000132 1.6e-09 68.2 252 25.0
Dinv15511 Davidia involucrata HOM05D000231 ORTHO05D000132 2.0e-09 67.8 213 27.2
Lj1A739T16 Lonicera japonica HOM05D000231 ORTHO05D000132 2.0e-09 67.8 220 24.1
Oeu001663.1 Olea europaea HOM05D000231 ORTHO05D000132 2.0e-09 67.8 207 26.6
Prupe.4G034400 Prunus persica HOM05D000231 ORTHO05D000132 2.0e-09 67.8 209 25.8
Gorai.012G132300 Gossypium raimondii HOM05D000231 ORTHO05D000132 2.7e-09 67.4 252 25.4
Sabra19G0119200 Salix brachista HOM05D000231 ORTHO05D000132 2.7e-09 67.4 209 26.3
Sabra19G0134700 Salix brachista HOM05D000231 ORTHO05D000132 2.7e-09 67.4 209 26.3
vmacro12253 Vaccinium macrocarpon HOM05D000231 ORTHO05D000132 2.7e-09 67.4 250 22.0
CSS0012884 Camellia sinensis var. sinensis HOM05D000231 ORTHO05D000132 3.5e-09 67.0 230 24.8
CSS0039102 Camellia sinensis var. sinensis HOM05D000231 ORTHO05D000132 3.5e-09 67.0 230 24.8
Ciclev10017833m.g Citrus clementina HOM05D000231 ORTHO05D000132 3.5e-09 67.0 179 28.5
SEGI_09445 Sequoiadendron giganteum HOM05D000231 ORTHO05D000132 3.5e-09 67.0 210 27.1
arahy.Tifrunner.gnm1.ann1.E07XC4 Arachis hypogaea HOM05D000231 ORTHO05D000132 4.5e-09 66.6 237 26.2
Potri.011G040500 Populus trichocarpa HOM05D000231 ORTHO05D000132 4.5e-09 66.6 248 26.6
Sabra11G0027600 Salix brachista HOM05D000231 ORTHO05D000132 5.9e-09 66.2 202 29.2
CANSAT01G1370 Cannabis sativa HOM05D000231 ORTHO05D000132 7.7e-09 65.9 259 27.0
Oeu017981.1 Olea europaea HOM05D000231 ORTHO05D000132 7.7e-09 65.9 173 28.9
arahy.Tifrunner.gnm1.ann1.HLP8WR Arachis hypogaea HOM05D000231 ORTHO05D000132 1.0e-08 65.5 212 25.5
FAN05G3528 Fragaria x ananassa HOM05D000231 ORTHO05D000132 1.0e-08 65.5 228 23.7
arahy.Tifrunner.gnm1.ann1.487RVS Arachis hypogaea HOM05D000231 ORTHO05D000132 1.3e-08 65.1 212 26.4
FAN21G2910 Fragaria x ananassa HOM05D000231 ORTHO05D000132 1.3e-08 65.1 220 25.5
Lalb_Chr14g0366521 Lupinus albus HOM05D000231 ORTHO05D000132 1.3e-08 65.1 259 23.9
Haze_13051 Corylus avellana HOM05D000231 ORTHO05D000132 1.7e-08 64.7 217 26.7
FvH4_6g44360 Fragaria vesca HOM05D000231 ORTHO05D000132 1.7e-08 64.7 253 22.1
FAN02G3177 Fragaria x ananassa HOM05D000231 ORTHO05D000132 1.7e-08 64.7 260 21.5
FAN09G1693 Fragaria x ananassa HOM05D000231 ORTHO05D000132 1.7e-08 64.7 235 23.0
TPR.G7331 Trifolium pratense HOM05D000231 ORTHO05D011714 1.7e-08 64.7 94 37.2
ECA236G4096 Erigeron canadensis HOM05D000231 ORTHO05D011714 2.2e-08 64.3 227 25.6
DCAR_012970 Daucus carota HOM05D000231 ORTHO05D000132 2.9e-08 63.9 213 22.5
Medtr2g011500 Medicago truncatula HOM05D000231 ORTHO05D000132 2.9e-08 63.9 182 25.3
Cc00_g11820 Coffea canephora HOM05D000231 ORTHO05D000132 3.8e-08 63.5 211 25.6
Oeu040758.1 Olea europaea HOM05D000231 ORTHO05D000132 3.8e-08 63.5 214 28.5
Phvul.005G109600 Phaseolus vulgaris HOM05D000231 ORTHO05D000132 3.8e-08 63.5 246 25.6
QL08p036571 Quercus lobata HOM05D000231 ORTHO05D000132 3.8e-08 63.5 202 29.7
Rhsim06G0153500 Rhododendron simsii HOM05D000231 ORTHO05D000132 3.8e-08 63.5 186 26.3
RcHm_v2.0_Chr2g0161291 Rosa chinensis HOM05D000231 ORTHO05D000132 3.8e-08 63.5 253 22.5
AL1G58800 Arabidopsis lyrata HOM05D018228 ORTHO05D021410 5.0e-08 63.2 233 24.0
COL.COLO4_04511 Corchorus olitorius HOM05D000231 ORTHO05D000132 5.0e-08 63.2 209 24.4
Gohir.A03G142200 Gossypium hirsutum HOM05D000231 ORTHO05D000132 5.0e-08 63.2 225 26.2
Gohir.D02G165500 Gossypium hirsutum HOM05D000231 ORTHO05D000132 5.0e-08 63.2 225 26.2
Gorai.005G185600 Gossypium raimondii HOM05D000231 ORTHO05D000132 5.0e-08 63.2 225 26.2
Oeu012250.1 Olea europaea HOM05D000231 ORTHO05D000132 5.0e-08 63.2 223 27.8
Oeu052548.1 Olea europaea HOM05D000231 ORTHO05D000132 5.0e-08 63.2 209 23.4
SalBow2G0005 Salvia bowleyana HOM05D000231 ORTHO05D000132 5.0e-08 63.2 255 24.3
SalBow2G1453 Salvia bowleyana HOM05D000231 ORTHO05D000132 5.0e-08 63.2 255 24.3
CAN.G898.2 Capsicum annuum HOM05D000231 ORTHO05D000132 6.5e-08 62.8 192 25.0
Potri.013G149000 Populus trichocarpa HOM05D000231 ORTHO05D000132 6.5e-08 62.8 203 27.6
SalBow7G0486 Salvia bowleyana HOM05D000231 ORTHO05D000132 6.5e-08 62.8 225 21.8
PGSC0003DMG400022397 Solanum tuberosum HOM05D000231 ORTHO05D000132 6.5e-08 62.8 229 25.8
Lalb_Chr03g0029081 Lupinus albus HOM05D000231 ORTHO05D000132 8.5e-08 62.4 280 22.9
VMungo0331G1509 Vigna mungo HOM05D005320 ORTHO05D007922 8.5e-08 62.4 247 23.9
Gohir.D06G127200 Gossypium hirsutum HOM05D000231 ORTHO05D000132 1.1e-07 62.0 190 25.8
Lsat_1_v5_gn_1_124201 Lactuca sativa HOM05D000231 ORTHO05D000132 1.1e-07 62.0 212 26.4
Solyc02g079370.3 Solanum lycopersicum HOM05D000231 ORTHO05D000132 1.1e-07 62.0 266 24.4
Sopen02g024170 Solanum pennellii HOM05D000231 ORTHO05D000132 1.1e-07 62.0 229 26.2
Atru.chr11.1967 Acer truncatum HOM05D000231 ORTHO05D000132 1.5e-07 61.6 277 23.5
CiPaw.04G121800 Carya illinoinensis HOM05D000231 ORTHO05D000132 1.5e-07 61.6 252 23.8
TWI63G0979 Tripterygium wilfordii HOM05D000231 ORTHO05D000132 1.9e-07 61.2 160 30.0
FAN14G3256 Fragaria x ananassa HOM05D000231 ORTHO05D000132 2.5e-07 60.8 260 20.8
Phvul.011G110000 Phaseolus vulgaris HOM05D000231 ORTHO05D000132 2.5e-07 60.8 212 27.4
Potri.008G146600 Populus trichocarpa HOM05D000231 ORTHO05D000132 2.5e-07 60.8 220 27.3
Sc12g0003930 Simmondsia chinensis HOM05D000231 ORTHO05D000132 2.5e-07 60.8 205 22.4
Gorai.008G151200 Gossypium raimondii HOM05D000231 ORTHO05D000132 3.2e-07 60.5 248 24.6
SEGI_11085 Sequoiadendron giganteum HOM05D000231 ORTHO05D000132 3.2e-07 60.5 215 26.0
VMungo1127G1725 Vigna mungo HOM05D000231 ORTHO05D000132 3.2e-07 60.5 212 26.9
Actinidia05325 Actinidia chinensis HOM05D000231 ORTHO05D000132 4.2e-07 60.1 183 26.8
Gohir.A03G161100 Gossypium hirsutum HOM05D000231 ORTHO05D000132 4.2e-07 60.1 184 26.6
Thhalv10018896m.g Eutrema salsugineum HOM05D000231 ORTHO05D000132 5.5e-07 59.7 211 26.5
Glyma.06G299700 Glycine max HOM05D000231 ORTHO05D000132 5.5e-07 59.7 228 26.8
Gohir.A12G135900 Gossypium hirsutum HOM05D000231 ORTHO05D000132 5.5e-07 59.7 230 24.3
Oeu039488.1 Olea europaea HOM05D000231 ORTHO05D000132 5.5e-07 59.7 224 27.7
Actinidia05151 Actinidia chinensis HOM05D026598 ORTHO05D021078 7.2e-07 59.3 234 21.8
Aqoxy1G00877 Aquilegia oxysepala HOM05D000231 ORTHO05D000132 7.2e-07 59.3 192 24.5
CANSAT11G1502 Cannabis sativa HOM05D029001 ORTHO05D011714 7.2e-07 59.3 183 25.7
Lalb_Chr20g0110121 Lupinus albus HOM05D000231 ORTHO05D011714 7.2e-07 59.3 75 42.7
Nitab4.5_0000273g0230 Nicotiana tabacum HOM05D000231 ORTHO05D000132 7.2e-07 59.3 263 22.8
Sp5g25340 Schrenkiella parvula HOM05D000231 ORTHO05D000132 7.2e-07 59.3 215 26.5
Sabra13G0120200 Salix brachista HOM05D000231 ORTHO05D000132 9.4e-07 58.9 178 28.7
Ciclev10032080m.g Citrus clementina HOM05D000231 ORTHO05D000132 1.2e-06 58.5 227 26.0
Eucgr.A01768 Eucalyptus grandis HOM05D000231 ORTHO05D000132 1.2e-06 58.5 209 26.3
Eucgr.B02557 Eucalyptus grandis HOM05D000231 ORTHO05D000132 1.2e-06 58.5 211 26.1
Gorai.005G206700 Gossypium raimondii HOM05D000231 ORTHO05D000132 1.2e-06 58.5 240 24.2
Aqoxy3G00907 Aquilegia oxysepala HOM05D000231 ORTHO05D000132 1.6e-06 58.2 219 25.6
Cc11_g14290 Coffea canephora HOM05D000231 ORTHO05D000132 1.6e-06 58.2 215 27.0
Glyma.12G105600 Glycine max HOM05D000231 ORTHO05D000132 1.6e-06 58.2 228 25.4
Gohir.D11G207800 Gossypium hirsutum HOM05D000231 ORTHO05D000132 1.6e-06 58.2 145 28.3
DCAR_026550 Daucus carota HOM05D000231 ORTHO05D000132 2.1e-06 57.8 222 26.1
Gohir.A06G122700 Gossypium hirsutum HOM05D000231 ORTHO05D000132 2.7e-06 57.4 165 24.8
Rhsim08G0120700 Rhododendron simsii HOM05D030015 ORTHO05D000060 2.7e-06 57.4 233 21.0
PGSC0003DMG400015088 Solanum tuberosum HOM05D000231 ORTHO05D000132 2.7e-06 57.4 225 25.3
Lj3g0008927 Lotus japonicus HOM05D000231 ORTHO05D000132 3.6e-06 57.0 223 26.0
Ciclev10028735m.g Citrus clementina HOM05D000231 ORTHO05D000132 4.7e-06 56.6 198 26.8
Eucgr.H02304 Eucalyptus grandis HOM05D000231 ORTHO05D000132 4.7e-06 56.6 274 23.4
Os07g0556000 Oryza sativa ssp. japonica HOM05D000231 ORTHO05D000132 4.7e-06 56.6 187 26.7
Nitab4.5_0010843g0010 Nicotiana tabacum HOM05D000231 ORTHO05D000132 6.1e-06 56.2 216 25.9
Zm00001eb323840 Zea mays HOM05D000231 ORTHO05D000132 6.1e-06 56.2 202 24.3
Migut.H02312 Erythranthe guttata HOM05D000231 ORTHO05D000132 8.0e-06 55.8 201 25.4
Gorai.007G222800 Gossypium raimondii HOM05D000231 ORTHO05D000132 8.0e-06 55.8 145 27.6
Peaxi162Scf01035g00113 Petunia axillaris HOM05D000231 ORTHO05D000132 8.0e-06 55.8 207 24.2
Thecc.02G168000 Theobroma cacao HOM05D000231 ORTHO05D000132 8.0e-06 55.8 221 25.3


User provided reference genes

Program Settings