Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g047940 Medicago truncatula HOM05D000912 ORTHO05D001232 4.0e-113 411.4 201 100.0
Medtr5g085310 Medicago truncatula HOM05D000912 ORTHO05D001232 7.3e-46 188.0 344 39.0
Medtr6g017010 Medicago truncatula HOM05D000912 ORTHO05D001232 2.3e-44 183.0 352 38.1
Medtr3g101100 Medicago truncatula HOM05D000912 ORTHO05D001232 6.4e-42 174.9 413 32.4
Medtr3g107960 Medicago truncatula HOM05D000912 ORTHO05D001232 1.4e-41 173.7 399 32.1
TPR.G9664 Trifolium pratense HOM05D000912 ORTHO05D001232 4.3e-30 135.6 408 28.4
Medtr5g017020 Medicago truncatula HOM05D000912 ORTHO05D001232 7.3e-30 134.8 332 33.1
Medtr6g017130 Medicago truncatula HOM05D000912 ORTHO05D001232 4.9e-26 122.1 129 51.9
Ca_26347_v3 Cicer arietinum L. HOM05D000912 ORTHO05D001232 7.8e-24 114.8 395 26.3
arahy.Tifrunner.gnm1.ann1.9W5653 Arachis hypogaea HOM05D000912 ORTHO05D001232 5.1e-23 112.1 376 25.0
arahy.Tifrunner.gnm1.ann1.6WKR13 Arachis hypogaea HOM05D000912 ORTHO05D001232 1.5e-22 110.5 376 24.7
Psat1g061920 Pisum sativum HOM05D000912 ORTHO05D001232 5.6e-22 108.6 396 26.8
Psat0s4447g0040 Pisum sativum HOM05D000912 ORTHO05D001232 1.8e-20 103.6 383 26.6
Glyma.19G044000 Glycine max HOM05D000912 ORTHO05D001232 2.4e-17 93.2 379 24.5
Actinidia18119 Actinidia chinensis HOM05D000912 ORTHO05D001232 1.3e-15 87.4 375 21.6
Nitab4.5_0004420g0020 Nicotiana tabacum HOM05D000912 ORTHO05D001232 1.7e-15 87.0 209 29.7
arahy.Tifrunner.gnm1.ann1.WTJ3VC Arachis hypogaea HOM05D000912 ORTHO05D001232 1.1e-14 84.3 225 27.6
CSS0038016 Camellia sinensis var. sinensis HOM05D000912 ORTHO05D001232 1.5e-14 84.0 313 26.5
Solyc02g089790.4 Solanum lycopersicum HOM05D000912 ORTHO05D001232 2.5e-14 83.2 322 23.0
Sopen02g034480 Solanum pennellii HOM05D000912 ORTHO05D001232 2.5e-14 83.2 322 23.0
Lj5g0024138 Lotus japonicus HOM05D000912 ORTHO05D001232 1.3e-13 80.9 391 24.6
Lj5g0012560 Lotus japonicus HOM05D000912 ORTHO05D001232 2.1e-13 80.1 391 24.0
Medtr5g085317 Medicago truncatula HOM05D000912 ORTHO05D001232 6.2e-13 78.6 51 72.5
Peaxi162Scf01056g00249 Petunia axillaris HOM05D000912 ORTHO05D001232 2.4e-12 76.6 175 30.9
CAN.G497.8 Capsicum annuum HOM05D000912 ORTHO05D001232 3.1e-12 76.3 349 22.3
AUR62014546 Chenopodium quinoa HOM05D000912 ORTHO05D001232 4.0e-12 75.9 336 22.9
Medtr0299s0030 Medicago truncatula HOM05D000912 ORTHO05D001232 4.0e-12 75.9 129 41.9
Ca_14089_v3 Cicer arietinum L. HOM05D000912 ORTHO05D001232 9.0e-12 74.7 73 50.7
Nitab4.5_0009272g0050 Nicotiana tabacum HOM05D000912 ORTHO05D001232 2.0e-11 73.6 208 28.4
Lj2g0027369 Lotus japonicus HOM05D000912 ORTHO05D001232 3.4e-11 72.8 163 34.4
Cc07_g05030 Coffea canephora HOM05D000912 ORTHO05D001232 4.5e-11 72.4 249 26.5
Ca_26250_v3 Cicer arietinum L. HOM05D000912 ORTHO05D001232 5.8e-11 72.0 162 32.7
Medtr6g017000 Medicago truncatula HOM05D000912 ORTHO05D001232 7.6e-11 71.6 202 28.7
EL10Ac2g04620 Beta vulgaris HOM05D000912 ORTHO05D001232 9.9e-11 71.2 379 21.9
Lj4A131T26 Lonicera japonica HOM05D000912 ORTHO05D019550 2.2e-10 70.1 180 27.8
PGSC0003DMG400015604 Solanum tuberosum HOM05D000912 ORTHO05D001232 2.9e-10 69.7 186 28.5
Lj5g0024613 Lotus japonicus HOM05D000912 ORTHO05D001232 3.8e-10 69.3 243 26.7
Thecc.04G140300 Theobroma cacao HOM05D000912 ORTHO05D001232 1.4e-09 67.4 376 22.9
GSVIVG01031074001 Vitis vinifera HOM05D000912 ORTHO05D001232 3.2e-09 66.2 120 34.2
Phvul.003G032800 Phaseolus vulgaris HOM05D000912 ORTHO05D001232 7.1e-09 65.1 303 24.4
TPR.G19978 Trifolium pratense HOM05D000912 ORTHO05D001232 7.1e-09 65.1 202 24.8
AUR62008957 Chenopodium quinoa HOM05D000912 ORTHO05D001232 1.2e-08 64.3 369 21.4
Solyc05g006180.3 Solanum lycopersicum HOM05D000912 ORTHO05D001232 1.6e-08 63.9 181 26.0
Medtr6g017135 Medicago truncatula HOM05D000912 ORTHO05D001232 2.7e-08 63.2 35 77.1
CSS0044878 Camellia sinensis var. sinensis HOM05D000912 ORTHO05D001232 3.5e-08 62.8 116 30.2
Cpa.g.sc818.3 Carica papaya HOM05D000912 ORTHO05D001232 6.0e-08 62.0 99 38.4
Dinv33924 Davidia involucrata HOM05D000912 ORTHO05D001232 1.0e-07 61.2 108 36.1
Medtr6g017140 Medicago truncatula HOM05D000912 ORTHO05D001232 1.8e-07 60.5 129 33.3
VMungo1215G2223 Vigna mungo HOM05D000912 ORTHO05D001232 1.8e-07 60.5 64 51.6
Manes.01G107500 Manihot esculenta HOM05D000912 ORTHO05D001232 2.3e-07 60.1 211 25.6
Oeu054518.1 Olea europaea HOM05D000912 ORTHO05D001232 3.0e-07 59.7 99 33.3
Sc10g0001380 Simmondsia chinensis HOM05D000912 ORTHO05D001232 6.7e-07 58.5 120 35.8
Gorai.004G046000 Gossypium raimondii HOM05D000912 ORTHO05D001232 8.7e-07 58.2 368 22.0
SEGI_07540 Sequoiadendron giganteum HOM05D000912 ORTHO05D001232 8.7e-07 58.2 71 39.4
SEGI_09479 Sequoiadendron giganteum HOM05D000912 ORTHO05D001232 8.7e-07 58.2 71 39.4
SEGI_30611 Sequoiadendron giganteum HOM05D000912 ORTHO05D001232 8.7e-07 58.2 71 39.4
Gohir.D08G046800 Gossypium hirsutum HOM05D000912 ORTHO05D001232 1.1e-06 57.8 369 22.2
Duzib268G0460 Durio zibethinus HOM05D000912 ORTHO05D001232 1.5e-06 57.4 394 21.1
Migut.H00534 Erythranthe guttata HOM05D000912 ORTHO05D001232 1.5e-06 57.4 94 33.0
Potri.004G104201 Populus trichocarpa HOM05D000912 ORTHO05D001232 1.5e-06 57.4 81 33.3
Prupe.3G240900 Prunus persica HOM05D000912 ORTHO05D001232 1.5e-06 57.4 96 37.5
AT1G16710 Arabidopsis thaliana HOM05D000912 ORTHO05D001232 1.9e-06 57.0 95 34.7
FvH4_6g45470 Fragaria vesca HOM05D000912 ORTHO05D001232 5.6e-06 55.5 102 28.4
FAN14G3458 Fragaria x ananassa HOM05D000912 ORTHO05D001232 5.6e-06 55.5 93 29.0
Oeu061990.1 Olea europaea HOM05D000912 ORTHO05D001232 7.4e-06 55.1 96 35.4
Psat1g061280 Pisum sativum HOM05D000912 ORTHO05D001232 7.4e-06 55.1 34 70.6
AUR62025681 Chenopodium quinoa HOM05D000912 ORTHO05D001232 9.6e-06 54.7 71 38.0
Oeu025119.3 Olea europaea HOM05D000912 ORTHO05D001232 9.6e-06 54.7 55 47.3


User provided reference genes

Program Settings