Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g047040 Medicago truncatula HOM05D000188 ORTHO05D261727 2.4e-40 168.3 80 100.0
Medtr5g076310 Medicago truncatula HOM05D000188 ORTHO05D000362 2.2e-09 65.5 54 66.7
Psat2g044280 Pisum sativum HOM05D000188 ORTHO05D000362 8.2e-09 63.5 54 61.1
Psat0ss9727g0120 Pisum sativum HOM05D000188 ORTHO05D000362 1.8e-08 62.4 51 64.7
Medtr5g076380 Medicago truncatula HOM05D000188 ORTHO05D000362 2.4e-08 62.0 51 66.7
TPR.G5305 Trifolium pratense HOM05D000188 ORTHO05D000362 7.0e-08 60.5 54 63.0
TPR.G6025 Trifolium pratense HOM05D000188 ORTHO05D000362 7.0e-08 60.5 54 63.0
Medtr5g076320 Medicago truncatula HOM05D000188 ORTHO05D000362 3.5e-07 58.2 51 58.8
Prupe.3G013100 Prunus persica HOM05D000188 ORTHO05D000362 4.5e-07 57.8 51 52.9
Ca_17053_v3 Cicer arietinum L. HOM05D000188 ORTHO05D000362 7.7e-07 57.0 53 52.8
Lsat_1_v5_gn_2_71921 Lactuca sativa HOM05D000188 ORTHO05D000362 1.0e-06 56.6 53 50.9
Cfa007737 Carpinus fangiana HOM05D000188 ORTHO05D000362 1.7e-06 55.8 51 52.9
TPR.G10301 Trifolium pratense HOM05D000188 ORTHO05D000362 1.7e-06 55.8 37 70.3
FvH4_3g00170 Fragaria vesca HOM05D000188 ORTHO05D000362 2.2e-06 55.5 51 52.9
Medtr5g076500 Medicago truncatula HOM05D000188 ORTHO05D000362 2.2e-06 55.5 53 50.9
LjContig00141g0011632 Lotus japonicus HOM05D000188 ORTHO05D000362 2.9e-06 55.1 53 56.6
TPR.G5306 Trifolium pratense HOM05D000188 ORTHO05D000362 2.9e-06 55.1 53 50.9
FAN28G0099 Fragaria x ananassa HOM05D000188 ORTHO05D000362 3.8e-06 54.7 38 60.5
MD09G1281400 Malus domestica HOM05D000188 ORTHO05D000362 3.8e-06 54.7 51 52.9
Ca_17055_v3 Cicer arietinum L. HOM05D000188 ORTHO05D000362 5.0e-06 54.3 48 58.3
Medtr5g076440 Medicago truncatula HOM05D000188 ORTHO05D000362 6.5e-06 53.9 53 49.1
RcHm_v2.0_Chr3g0488111 Rosa chinensis HOM05D000188 ORTHO05D000362 6.5e-06 53.9 51 52.9
Glyma.14G208700 Glycine max HOM05D000188 ORTHO05D000362 8.5e-06 53.5 51 56.9
LjContig00141g0008649 Lotus japonicus HOM05D000188 ORTHO05D000362 8.5e-06 53.5 38 63.2
LjContig00141g0017766 Lotus japonicus HOM05D000188 ORTHO05D000362 8.5e-06 53.5 50 58.0
LjContig00141g0025745 Lotus japonicus HOM05D000188 ORTHO05D000362 8.5e-06 53.5 38 63.2


User provided reference genes

Program Settings