Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g045980 Medicago truncatula HOM05D005842 ORTHO05D007077 2.3e-39 166.0 140 100.0
Ca_26210_v3 Cicer arietinum L. HOM05D005842 ORTHO05D007077 2.9e-26 122.5 129 56.6
Lj6g0013781 Lotus japonicus HOM05D005842 ORTHO05D007077 4.6e-24 115.2 125 55.2
Glyma.10G130600 Glycine max HOM05D005842 ORTHO05D007077 2.4e-20 102.8 125 49.6
Glyma.20G081400 Glycine max HOM05D005842 ORTHO05D007077 6.9e-20 101.3 125 49.6
Medtr1g045950 Medicago truncatula HOM05D005842 ORTHO05D007077 3.4e-19 99.0 175 64.0
Psat6g108960 Pisum sativum HOM05D005842 ORTHO05D007077 1.9e-17 93.2 133 73.7
Phvul.007G233000 Phaseolus vulgaris HOM05D005842 ORTHO05D007077 5.7e-14 81.6 132 42.4
arahy.Tifrunner.gnm1.ann1.Q9KDDQ Arachis hypogaea HOM05D005842 ORTHO05D007077 9.7e-14 80.9 127 44.1
Lalb_Chr01g0011321 Lupinus albus HOM05D005842 ORTHO05D007077 9.7e-14 80.9 125 43.2
Migut.N00324 Erythranthe guttata HOM05D005842 ORTHO05D007077 1.6e-13 80.1 122 43.4
arahy.Tifrunner.gnm1.ann1.LRUD7W Arachis hypogaea HOM05D005842 ORTHO05D007077 2.2e-13 79.7 127 43.3
arahy.Tifrunner.gnm1.ann1.GMD4I9 Arachis hypogaea HOM05D005842 ORTHO05D007077 2.8e-13 79.3 127 44.9
arahy.Tifrunner.gnm1.ann1.JU0LD9 Arachis hypogaea HOM05D005842 ORTHO05D007077 4.8e-13 78.6 127 44.1
TPR.G23959 Trifolium pratense HOM05D005842 ORTHO05D007077 2.6e-11 72.8 113 41.6
Lalb_Chr19g0128561 Lupinus albus HOM05D005842 ORTHO05D007077 4.5e-11 72.0 106 43.4
TWI09G0179 Tripterygium wilfordii HOM05D005842 ORTHO05D007077 5.9e-11 71.6 131 35.9
SHI18628 Sapria himalayana HOM05D005842 ORTHO05D007077 7.7e-11 71.2 128 35.9
PSO832G1240 Papaver somniferum HOM05D005842 ORTHO05D007077 1.7e-10 70.1 132 36.4
MD16G1231600 Malus domestica HOM05D005842 ORTHO05D007077 2.2e-10 69.7 125 38.4
Lalb_Chr03g0036861 Lupinus albus HOM05D005842 ORTHO05D007077 2.9e-10 69.3 108 40.7
MD13G1226500 Malus domestica HOM05D005842 ORTHO05D007077 3.8e-10 68.9 125 37.6
Actinidia39941 Actinidia chinensis HOM05D005842 ORTHO05D007077 1.4e-09 67.0 123 35.8
Migut.H00813 Erythranthe guttata HOM05D005842 ORTHO05D007077 1.4e-09 67.0 122 37.7
Actinidia11383 Actinidia chinensis HOM05D005842 ORTHO05D007077 3.2e-09 65.9 123 36.6
Hma1.2p1_0112F.1_g055010 Hydrangea macrophylla HOM05D005842 ORTHO05D007077 3.2e-09 65.9 124 34.7
Nitab4.5_0001769g0190 Nicotiana tabacum HOM05D005842 ORTHO05D007077 3.2e-09 65.9 122 34.4
Cc03_g06880 Coffea canephora HOM05D005842 ORTHO05D007077 4.2e-09 65.5 126 34.9
Cc03_g06890 Coffea canephora HOM05D005842 ORTHO05D007077 4.2e-09 65.5 126 34.9
Cc03_g06900 Coffea canephora HOM05D005842 ORTHO05D007077 4.2e-09 65.5 126 34.9
Cc03_g06910 Coffea canephora HOM05D005842 ORTHO05D007077 4.2e-09 65.5 126 34.9
Cc03_g06920 Coffea canephora HOM05D005842 ORTHO05D007077 4.2e-09 65.5 126 34.9
Cc03_g06930 Coffea canephora HOM05D005842 ORTHO05D007077 4.2e-09 65.5 126 34.9
Cc03_g06940 Coffea canephora HOM05D005842 ORTHO05D007077 4.2e-09 65.5 126 34.9
Cc03_g06950 Coffea canephora HOM05D005842 ORTHO05D007077 4.2e-09 65.5 126 34.9
Dinv27137 Davidia involucrata HOM05D005842 ORTHO05D007077 4.2e-09 65.5 124 34.7
Prupe.1G053900 Prunus persica HOM05D005842 ORTHO05D007077 4.2e-09 65.5 125 36.0
PGSC0003DMG400027164 Solanum tuberosum HOM05D005842 ORTHO05D007077 2.7e-08 62.8 122 33.6
CSS0006411 Camellia sinensis var. sinensis HOM05D005842 ORTHO05D007077 1.0e-07 60.8 123 33.3
CAN.G305.25 Capsicum annuum HOM05D005842 ORTHO05D007077 1.0e-07 60.8 122 32.8
Nn1g03040 Nelumbo nucifera HOM05D005842 ORTHO05D007077 1.0e-07 60.8 133 32.3
TAR633G2520 Trochodendron aralioides HOM05D005842 ORTHO05D007077 1.0e-07 60.8 133 31.6
THA.LOC104821628 Tarenaya hassleriana HOM05D005842 ORTHO05D007077 1.8e-07 60.1 125 34.4
CSS0017402 Camellia sinensis var. sinensis HOM05D005842 ORTHO05D007077 3.0e-07 59.3 122 32.0
Dinv29781 Davidia involucrata HOM05D005842 ORTHO05D007077 3.0e-07 59.3 38 71.1
Atru.chr4.1869 Acer truncatum HOM05D005842 ORTHO05D007077 3.9e-07 58.9 130 43.1
PSO210G3477 Papaver somniferum HOM05D005842 ORTHO05D007077 3.9e-07 58.9 132 46.2
PSO210G4408 Papaver somniferum HOM05D005842 ORTHO05D007077 3.9e-07 58.9 132 46.2
Cc00_g17210 Coffea canephora HOM05D005842 ORTHO05D007077 5.1e-07 58.5 126 32.5
SpUn0225_0010 Schrenkiella parvula HOM05D005842 ORTHO05D007077 5.1e-07 58.5 125 55.2
Actinidia25095 Actinidia chinensis HOM05D005842 ORTHO05D007077 6.7e-07 58.2 123 30.9
PSO764G0017 Papaver somniferum HOM05D005842 ORTHO05D007077 6.7e-07 58.2 132 46.2
Nn1g03041 Nelumbo nucifera HOM05D005842 ORTHO05D007077 8.8e-07 57.8 133 31.6
Atru.chr4.1859_Atru.chr4.1858 Acer truncatum HOM05D005842 ORTHO05D007077 1.5e-06 57.0 129 41.1
Atru.chr4.1868 Acer truncatum HOM05D005842 ORTHO05D007077 1.5e-06 57.0 129 41.1
Potri.010G062800 Populus trichocarpa HOM05D005842 ORTHO05D007077 1.5e-06 57.0 125 32.8
Sabra10G0043900 Salix brachista HOM05D005842 ORTHO05D007077 1.5e-06 57.0 125 33.6
Cpa.g.sc336.6 Carica papaya HOM05D008630 ORTHO05D010727 4.3e-06 55.5 35 74.3
Nn1g03039 Nelumbo nucifera HOM05D005842 ORTHO05D007077 4.3e-06 55.5 136 33.1
Sabra10G0084400 Salix brachista HOM05D003281 ORTHO05D004128 4.3e-06 55.5 125 32.8
Thecc.06G073200 Theobroma cacao HOM05D008630 ORTHO05D010727 4.3e-06 55.5 38 76.3
MELO3C023400.2 Cucumis melo HOM05D008630 ORTHO05D010727 5.7e-06 55.1 36 72.2
Dinv29780 Davidia involucrata HOM05D005842 ORTHO05D007077 7.4e-06 54.7 140 32.9
Nn1g03042 Nelumbo nucifera HOM05D005842 ORTHO05D007077 7.4e-06 54.7 135 31.9
Sed0009523 Sechium edule HOM05D008630 ORTHO05D010727 9.7e-06 54.3 39 71.8
GSVIVG01017248001 Vitis vinifera HOM05D008630 ORTHO05D010727 9.7e-06 54.3 43 67.4


User provided reference genes

Program Settings