Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g045660 Medicago truncatula HOM05D006603 ORTHO05D007786 1.9e-75 285.8 151 100.0
Ca_25848_v3 Cicer arietinum L. HOM05D006603 ORTHO05D007786 9.0e-65 250.4 148 89.9
Psat6g018400 Pisum sativum HOM05D006603 ORTHO05D007786 2.0e-64 249.2 149 89.3
Glyma.20G082000 Glycine max HOM05D006603 ORTHO05D007786 1.1e-62 243.4 149 87.2
TPR.G23967 Trifolium pratense HOM05D006603 ORTHO05D007786 4.2e-62 241.5 148 85.8
Lj6g0018890 Lotus japonicus HOM05D006603 ORTHO05D007786 3.5e-61 238.4 149 85.2
Lalb_Chr03g0036931 Lupinus albus HOM05D006603 ORTHO05D007786 1.5e-59 233.0 149 83.9
Phvul.007G231900 Phaseolus vulgaris HOM05D006603 ORTHO05D007786 6.9e-57 224.2 147 81.6
arahy.Tifrunner.gnm1.ann1.T2GGRX Arachis hypogaea HOM05D006603 ORTHO05D007786 6.4e-55 217.6 175 71.4
arahy.Tifrunner.gnm1.ann1.GIKJ41 Arachis hypogaea HOM05D006603 ORTHO05D007786 1.4e-54 216.5 175 70.9
Manes.03G157300 Manihot esculenta HOM05D006603 ORTHO05D007786 2.1e-50 202.6 148 73.6
CiPaw.01G176600 Carya illinoinensis HOM05D006603 ORTHO05D007786 3.1e-49 198.7 149 71.8
Ciclev10006126m.g Citrus clementina HOM05D006603 ORTHO05D007786 5.3e-49 198.0 151 71.5
Thecc.04G267600 Theobroma cacao HOM05D006603 ORTHO05D007786 4.5e-48 194.9 149 71.8
CANSAT78G1588 Cannabis sativa HOM05D006603 ORTHO05D007786 3.2e-46 188.7 149 69.1
Dinv29792 Davidia involucrata HOM05D006603 ORTHO05D007786 2.1e-45 186.0 147 68.7
VMungo0720G0308 Vigna mungo HOM05D006603 ORTHO05D007786 2.1e-45 186.0 124 79.0
Gohir.D09G231900 Gossypium hirsutum HOM05D006603 ORTHO05D007786 1.0e-44 183.7 145 68.3
TWI73G0993 Tripterygium wilfordii HOM05D006603 ORTHO05D007786 3.9e-44 181.8 149 67.1
MELO3C023048.2 Cucumis melo HOM05D006603 ORTHO05D007786 5.1e-44 181.4 148 65.5
EL10Ac3g06681 Beta vulgaris HOM05D006603 ORTHO05D007786 6.7e-44 181.0 148 66.9
Duzib151G0118 Durio zibethinus HOM05D006603 ORTHO05D007786 6.7e-44 181.0 138 72.5
Duzib212G0187 Durio zibethinus HOM05D006603 ORTHO05D007786 6.7e-44 181.0 149 67.8
Gohir.A09G230800 Gossypium hirsutum HOM05D006603 ORTHO05D007786 6.7e-44 181.0 145 67.6
Manes.15G046500 Manihot esculenta HOM05D006603 ORTHO05D007786 6.7e-44 181.0 140 69.3
Potri.008G173000 Populus trichocarpa HOM05D006603 ORTHO05D007786 6.7e-44 181.0 150 68.0
CSS0001604 Camellia sinensis var. sinensis HOM05D006603 ORTHO05D007786 8.7e-44 180.6 147 65.3
TAR633G2131 Trochodendron aralioides HOM05D006603 ORTHO05D007786 1.1e-43 180.3 148 66.2
TWI09G1292 Tripterygium wilfordii HOM05D006603 ORTHO05D007786 1.9e-43 179.5 149 69.1
MD16G1228700 Malus domestica HOM05D006603 ORTHO05D007786 2.5e-43 179.1 149 66.4
Potri.010G064500 Populus trichocarpa HOM05D006603 ORTHO05D007786 3.3e-43 178.7 149 66.4
CsaV3_2G012360 Cucumis sativus L. HOM05D006603 ORTHO05D007786 4.3e-43 178.3 148 66.2
GSVIVG01027941001 Vitis vinifera HOM05D006603 ORTHO05D007786 4.3e-43 178.3 144 72.9
Sc25g0004840 Simmondsia chinensis HOM05D006603 ORTHO05D007786 7.4e-43 177.6 148 64.9
PGR004G2303 Punica granatum HOM05D006603 ORTHO05D007786 9.6e-43 177.2 147 64.6
MD13G1223900 Malus domestica HOM05D006603 ORTHO05D007786 1.3e-42 176.8 149 64.4
MBI10_g39247_MAGBIO Magnolia biondii HOM05D006603 ORTHO05D007786 2.8e-42 175.6 149 63.8
RcHm_v2.0_Chr4g0395941 Rosa chinensis HOM05D006603 ORTHO05D007786 6.3e-42 174.5 149 65.8
Hma1.2p1_0112F.1_g054890 Hydrangea macrophylla HOM05D006603 ORTHO05D007786 8.2e-42 174.1 145 63.4
THA.LOC104816009 Tarenaya hassleriana HOM05D006603 ORTHO05D007786 8.2e-42 174.1 143 68.5
Eucgr.H02902 Eucalyptus grandis HOM05D006603 ORTHO05D007786 1.1e-41 173.7 150 64.7
FvH4_4g05040 Fragaria vesca HOM05D006603 ORTHO05D007786 1.8e-41 172.9 149 66.4
FAN12G4195 Fragaria x ananassa HOM05D006603 ORTHO05D007786 1.8e-41 172.9 149 66.4
Actinidia39936 Actinidia chinensis HOM05D006603 ORTHO05D007786 2.4e-41 172.6 147 62.6
Aqoxy2G03755 Aquilegia oxysepala HOM05D006603 ORTHO05D007786 2.4e-41 172.6 149 65.8
Hund22279 Selenicereus undatus HOM05D006603 ORTHO05D007786 7.6e-40 167.5 148 62.8
FAN22G1779 Fragaria x ananassa HOM05D006603 ORTHO05D007786 1.7e-39 166.4 149 64.4
Actinidia11378 Actinidia chinensis HOM05D006603 ORTHO05D007786 5.0e-39 164.9 147 60.5
AL1G14230 Arabidopsis lyrata HOM05D006603 ORTHO05D007786 5.0e-39 164.9 142 65.5
AT1G04555 Arabidopsis thaliana HOM05D006603 ORTHO05D007786 5.0e-39 164.9 142 64.1
Cc03_g06500 Coffea canephora HOM05D006603 ORTHO05D007786 5.0e-39 164.9 145 62.1
CAN.G812.23 Capsicum annuum HOM05D006603 ORTHO05D007786 6.5e-39 164.5 144 63.2
Carub.0001s0377 Capsella rubella HOM05D006603 ORTHO05D007786 8.5e-39 164.1 142 65.5
Nitab4.5_0005154g0030 Nicotiana tabacum HOM05D006603 ORTHO05D007786 1.1e-38 163.7 144 63.2
BcaNung06560 Brassica carinata HOM05D006603 ORTHO05D007786 1.9e-38 162.9 144 65.3
BolC5t29054H Brassica oleracea HOM05D006603 ORTHO05D007786 2.5e-38 162.5 142 65.5
Thhalv10009014m.g Eutrema salsugineum HOM05D006603 ORTHO05D007786 2.7e-37 159.1 149 62.4
Sp1g03390 Schrenkiella parvula HOM05D006603 ORTHO05D007786 3.6e-37 158.7 154 59.7
BraA10t42567Z Brassica rapa HOM05D006603 ORTHO05D007786 4.6e-37 158.3 144 64.6
Lsat_1_v5_gn_1_75441 Lactuca sativa HOM05D006603 ORTHO05D007786 4.6e-37 158.3 150 62.0
Sopen09g033770 Solanum pennellii HOM05D006603 ORTHO05D007786 4.6e-37 158.3 146 58.9
Peaxi162Scf00531g00210 Petunia axillaris HOM05D006603 ORTHO05D007786 3.0e-36 155.6 146 60.3
PSO210G0805 Papaver somniferum HOM05D006603 ORTHO05D007786 1.9e-35 152.9 144 59.7
PGSC0003DMG400001502 Solanum tuberosum HOM05D006603 ORTHO05D007786 4.3e-35 151.8 146 56.8
vmacro15486 Vaccinium macrocarpon HOM05D006603 ORTHO05D007786 7.4e-35 151.0 168 53.0
HanXRQChr01g0023081 Helianthus annuus HOM05D006603 ORTHO05D007786 3.7e-34 148.7 153 56.9
PSO210G7184 Papaver somniferum HOM05D006603 ORTHO05D007786 3.7e-34 148.7 146 59.6
Haze_11482 Corylus avellana HOM05D006603 ORTHO05D007786 6.3e-34 147.9 96 84.4
QL06p021600 Quercus lobata HOM05D006603 ORTHO05D007786 1.4e-33 146.7 97 80.4
Aa31LG1G20320 Aethionema arabicum HOM05D006603 ORTHO05D007786 1.8e-33 146.4 142 63.4
MSTRG.9849 Avicennia marina HOM05D006603 ORTHO05D007786 2.4e-33 146.0 152 56.6
CARHR003900 Cardamine hirsuta HOM05D006603 ORTHO05D007786 2.4e-33 146.0 135 62.2
COL.COLO4_15990 Corchorus olitorius HOM05D006603 ORTHO05D007786 2.4e-33 146.0 122 64.8
AUR62018035 Chenopodium quinoa HOM05D006603 ORTHO05D007786 9.1e-33 144.1 120 64.2
Sed0025873 Sechium edule HOM05D006603 ORTHO05D007786 1.2e-32 143.7 124 62.1
ATR0787G168 Amborella trichopoda HOM05D006603 ORTHO05D007786 2.0e-32 142.9 143 55.9
CDE04G0122 Ceratophyllum demersum HOM05D006603 ORTHO05D007786 2.0e-32 142.9 145 62.8
AUR62015239 Chenopodium quinoa HOM05D006603 ORTHO05D007786 2.0e-32 142.9 119 63.9
ClCG06G007300 Citrullus lanatus HOM05D006603 ORTHO05D007786 2.0e-32 142.9 157 56.7
Cfa014798 Carpinus fangiana HOM05D006603 ORTHO05D007786 7.7e-32 141.0 93 82.8
Gorai.006G254700 Gossypium raimondii HOM05D006603 ORTHO05D007786 7.7e-32 141.0 122 63.1
Oeu059390.1 Olea europaea HOM05D006603 ORTHO05D007786 1.0e-31 140.6 152 54.6
ECA248G1661 Erigeron canadensis HOM05D006603 ORTHO05D007786 1.3e-31 140.2 149 58.4
Sabra08G0132100 Salix brachista HOM05D006603 ORTHO05D007786 1.7e-31 139.8 94 79.8
SGA_v2.0_scaffold147G36268 Striga asiatica HOM05D006603 ORTHO05D007786 4.2e-30 135.2 151 56.3
Prupe.1G050700 Prunus persica HOM05D006603 ORTHO05D007786 5.5e-30 134.8 97 74.2
Os02g0816700 Oryza sativa ssp. japonica HOM05D006603 ORTHO05D007786 2.7e-29 132.5 139 54.0
Migut.G00559 Erythranthe guttata HOM05D006603 ORTHO05D007786 3.6e-29 132.1 152 50.7
FAN17G1046 Fragaria x ananassa HOM05D006603 ORTHO05D007786 4.6e-29 131.7 97 74.2
Ah.04g153810 Amaranthus hybridus HOM05D006603 ORTHO05D007786 6.1e-29 131.3 122 63.1
BolC8t46928H Brassica oleracea HOM05D006603 ORTHO05D007786 7.9e-29 131.0 146 56.2
BolC8t46924H Brassica oleracea HOM05D006603 ORTHO05D007786 1.0e-28 130.6 146 56.2
BolC8t46925H Brassica oleracea HOM05D006603 ORTHO05D007786 1.0e-28 130.6 146 56.2
BcaC07g36903 Brassica carinata HOM05D006603 ORTHO05D007786 2.3e-28 129.4 140 58.6
BolC8t46922H Brassica oleracea HOM05D006603 ORTHO05D007786 2.3e-28 129.4 147 56.5
A08p36880 Brassica napus HOM05D006603 ORTHO05D007786 3.0e-28 129.0 146 55.5
arahy.Tifrunner.gnm1.ann1.YUK4FD Arachis hypogaea HOM05D006603 ORTHO05D007786 3.9e-28 128.6 142 58.5
arahy.Tifrunner.gnm1.ann1.M12JR8 Arachis hypogaea HOM05D006603 ORTHO05D007786 5.1e-28 128.3 143 59.4
BolC8t52747H Brassica oleracea HOM05D000117 ORTHO05D007786 3.3e-27 125.6 138 58.7
Rhsim02G0047700 Rhododendron simsii HOM05D006603 ORTHO05D007786 4.4e-27 125.2 120 54.2
arahy.Tifrunner.gnm1.ann1.QP5CHE Arachis hypogaea HOM05D006603 ORTHO05D007786 5.7e-27 124.8 126 63.5
C05p02730 Brassica napus HOM05D001210 ORTHO05D001036 1.7e-26 123.2 116 61.2
HPP92_020757 Vanilla planifolia HOM05D006603 ORTHO05D007786 1.7e-26 123.2 150 50.7
Cfa014800 Carpinus fangiana HOM05D006603 ORTHO05D007786 2.2e-26 122.9 80 82.5
Zm00001eb191430 Zea mays HOM05D006603 ORTHO05D007786 8.2e-26 120.9 101 67.3
BcaB03g13488 Brassica carinata HOM05D006603 ORTHO05D007786 6.9e-25 117.9 128 55.5
Solyc09g090820.4 Solanum lycopersicum HOM05D006603 ORTHO05D007786 6.9e-25 117.9 89 68.5
DCAR_027355 Daucus carota HOM05D004511 ORTHO05D005348 1.7e-23 113.2 95 67.4
Nitab4.5_0001041g0010 Nicotiana tabacum HOM05D006603 ORTHO05D007786 2.9e-23 112.5 123 54.5
Dinv27124 Davidia involucrata HOM05D006603 ORTHO05D007786 8.5e-23 110.9 81 75.3
BraA09t42112Z Brassica rapa HOM05D000117 ORTHO05D007786 9.4e-22 107.5 113 61.9
Cpa.g.sc59.20 Carica papaya HOM05D006603 ORTHO05D007786 9.4e-22 107.5 72 77.8
C08p01190 Brassica napus HOM05D003335 ORTHO05D003853 1.6e-21 106.7 95 67.4
BraA08t35589Z Brassica rapa HOM05D003335 ORTHO05D003853 2.1e-21 106.3 95 67.4
arahy.Tifrunner.gnm1.ann1.N50CGY Arachis hypogaea HOM05D006603 ORTHO05D007786 5.2e-20 101.7 95 65.3
unitig_32.g11693 Utricularia gibba HOM05D006603 ORTHO05D007786 6.7e-20 101.3 170 40.6
SalBow2G0496 Salvia bowleyana HOM05D006603 ORTHO05D007786 8.8e-20 100.9 130 50.8
arahy.Tifrunner.gnm1.ann1.49WF5R Arachis hypogaea HOM05D006603 ORTHO05D007786 4.4e-19 98.6 86 69.8
Sabra10G0042500 Salix brachista HOM05D006603 ORTHO05D007786 6.3e-18 94.7 88 61.4
GSVIVG01027940001 Vitis vinifera HOM05D006603 ORTHO05D015671 7.2e-14 81.3 77 63.6
Mapoly0020s0146 Marchantia polymorpha HOM05D002103 ORTHO05D007786 2.7e-13 79.3 146 37.0
C08p52130 Brassica napus HOM05D000117 ORTHO05D001036 1.4e-12 77.0 62 69.4
A09p67800 Brassica napus HOM05D000117 ORTHO05D001036 1.2e-11 73.9 80 58.8
Nn1g02998 Nelumbo nucifera HOM05D006603 ORTHO05D007786 2.6e-11 72.8 80 50.0
SMO271G0137 Selaginella moellendorffii HOM05D002103 ORTHO05D004020 4.8e-10 68.6 142 31.7
AagrBONN_evm.TU.Sc2ySwM_228.3673 Anthoceros agrestis HOM05D002103 ORTHO05D004020 8.2e-10 67.8 142 33.8
SMO144G0051 Selaginella moellendorffii HOM05D002103 ORTHO05D007786 8.2e-10 67.8 138 32.6
Pp3c12_23290 Physcomitrium patens HOM05D002103 ORTHO05D004020 2.4e-09 66.2 142 35.2
SMO308G0045 Selaginella moellendorffii HOM05D002103 ORTHO05D004020 5.3e-09 65.1 133 32.3
Hma1.2p1_0982F.1_g243900 Hydrangea macrophylla HOM05D002103 ORTHO05D004020 9.1e-09 64.3 136 33.8
TAR625G1123 Trochodendron aralioides HOM05D002103 ORTHO05D004020 1.6e-08 63.5 146 31.5
QL06p021608 Quercus lobata HOM05D006603 ORTHO05D007786 2.7e-08 62.8 53 56.6
A10p02970 Brassica napus HOM05D000117 ORTHO05D001036 3.5e-08 62.4 46 73.9
CANSAT01G2416 Cannabis sativa HOM05D002103 ORTHO05D004020 1.0e-07 60.8 144 30.6
BolC8t46926H Brassica oleracea HOM05D006603 ORTHO05D007786 1.7e-07 60.1 108 41.7
Thhalv10025691m.g Eutrema salsugineum HOM05D002103 ORTHO05D004020 1.7e-07 60.1 144 31.9
Cfa018527 Carpinus fangiana HOM05D002103 ORTHO05D004020 2.2e-07 59.7 142 32.4
TAR381G0883 Trochodendron aralioides HOM05D002103 ORTHO05D004020 2.2e-07 59.7 141 30.5
CARHR241420 Cardamine hirsuta HOM05D002103 ORTHO05D004020 3.8e-07 58.9 143 30.8
CiPaw.16G045800 Carya illinoinensis HOM05D002103 ORTHO05D004020 6.5e-07 58.2 142 31.7
Actinidia23265 Actinidia chinensis HOM05D002103 ORTHO05D004020 8.5e-07 57.8 134 32.8
THA.LOC104803681 Tarenaya hassleriana HOM05D002103 ORTHO05D004020 1.1e-06 57.4 142 31.7
Gohir.A06G017200 Gossypium hirsutum HOM05D002103 ORTHO05D004020 1.5e-06 57.0 141 29.1
Gohir.D06G015300 Gossypium hirsutum HOM05D002103 ORTHO05D004020 1.5e-06 57.0 141 29.8
GSVIVG01009523001 Vitis vinifera HOM05D002103 ORTHO05D004020 1.5e-06 57.0 131 30.5
AagrBONN_evm.TU.Sc2ySwM_362.2116 Anthoceros agrestis HOM05D006603 ORTHO05D007786 2.5e-06 56.2 142 30.3
CSS0022390 Camellia sinensis var. sinensis HOM05D002103 ORTHO05D004020 2.5e-06 56.2 144 31.2
Peaxi162Scf00528g00417 Petunia axillaris HOM05D002103 ORTHO05D004020 2.5e-06 56.2 141 30.5
MD15G1084700 Malus domestica HOM05D002103 ORTHO05D004020 3.2e-06 55.8 142 30.3
Manes.18G032500 Manihot esculenta HOM05D002103 ORTHO05D004020 3.2e-06 55.8 131 29.8
Pp3c19_17840 Physcomitrium patens HOM05D002103 ORTHO05D004020 3.2e-06 55.8 158 29.1
CiPaw.15G061600 Carya illinoinensis HOM05D002103 ORTHO05D004020 4.2e-06 55.5 147 33.3
Duzib093G0320 Durio zibethinus HOM05D002103 ORTHO05D004020 5.5e-06 55.1 139 28.1
Sp7g31080 Schrenkiella parvula HOM05D002103 ORTHO05D004020 7.2e-06 54.7 140 29.3
Phvul.009G063800 Phaseolus vulgaris HOM05D002103 ORTHO05D004020 9.4e-06 54.3 141 31.2


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