Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g045340 Medicago truncatula HOM05D000147 ORTHO05D004093 5.9e-103 377.5 184 100.0
Medtr0002s1220 Medicago truncatula HOM05D000147 ORTHO05D004093 2.8e-97 358.6 198 90.9
Medtr5g083200 Medicago truncatula HOM05D000147 ORTHO05D004093 2.8e-97 358.6 198 90.9
Medtr1g070820 Medicago truncatula HOM05D000147 ORTHO05D004093 2.4e-96 355.5 198 89.9
Medtr3g111390 Medicago truncatula HOM05D000147 ORTHO05D004093 2.4e-96 355.5 198 89.9
Medtr1g069475 Medicago truncatula HOM05D000147 ORTHO05D004093 6.1e-31 138.3 100 64.0
Medtr3g116210 Medicago truncatula HOM05D000147 ORTHO05D004093 1.3e-30 137.1 110 58.2
Medtr6g453270 Medicago truncatula HOM05D000147 ORTHO05D004093 2.6e-26 122.9 96 58.3
Medtr6g016265 Medicago truncatula HOM05D000147 ORTHO05D004093 1.7e-25 120.2 116 52.6
Medtr1g050488 Medicago truncatula HOM05D000147 ORTHO05D004093 2.2e-25 119.8 82 63.4
TPR.G18407 Trifolium pratense HOM05D000147 ORTHO05D004093 6.7e-22 108.2 100 52.0
Medtr0015s0120 Medicago truncatula HOM05D000147 ORTHO05D004093 8.8e-22 107.8 89 53.9
TPR.G15289 Trifolium pratense HOM05D000147 ORTHO05D004093 8.8e-22 107.8 127 44.9
TPR.G26136 Trifolium pratense HOM05D000147 ORTHO05D001254 1.5e-21 107.1 152 39.5
Medtr6g034915 Medicago truncatula HOM05D000147 ORTHO05D004093 5.7e-21 105.1 120 47.5
Medtr2g027020 Medicago truncatula HOM05D000147 ORTHO05D004093 3.7e-20 102.4 118 44.1
TPR.G12197 Trifolium pratense HOM05D000147 ORTHO05D004093 4.8e-20 102.1 94 53.2
TPR.G29999 Trifolium pratense HOM05D000147 ORTHO05D004093 1.8e-19 100.1 119 44.5
Medtr5g049680 Medicago truncatula HOM05D000147 ORTHO05D004093 1.2e-18 97.4 97 49.5
Medtr8g028785 Medicago truncatula HOM05D000147 ORTHO05D004093 3.4e-18 95.9 130 40.8
Medtr5g034450 Medicago truncatula HOM05D000147 ORTHO05D004093 5.9e-18 95.1 80 53.8
Psat5g258880 Pisum sativum HOM05D000147 ORTHO05D004093 7.7e-18 94.7 116 44.8
Medtr1g088650 Medicago truncatula HOM05D000147 ORTHO05D004093 1.0e-17 94.4 116 38.8
Medtr6g089560 Medicago truncatula HOM05D000147 ORTHO05D004093 1.3e-17 94.0 104 44.2
TPR.G397 Trifolium pratense HOM05D000147 ORTHO05D004093 1.3e-17 94.0 118 42.4
Medtr1g034430 Medicago truncatula HOM05D000147 ORTHO05D004093 3.8e-17 92.4 105 42.9
Medtr1g081930 Medicago truncatula HOM05D000147 ORTHO05D004093 6.5e-17 91.7 120 41.7
Medtr8g059135 Medicago truncatula HOM05D000147 ORTHO05D004093 1.4e-16 90.5 92 48.9
Medtr7g013520 Medicago truncatula HOM05D000147 ORTHO05D004093 2.5e-16 89.7 110 40.9
Medtr5g036320 Medicago truncatula HOM05D000147 ORTHO05D004093 9.4e-16 87.8 84 51.2
Medtr5g037920 Medicago truncatula HOM05D000147 ORTHO05D004093 1.2e-15 87.4 121 34.7
Medtr5g085210 Medicago truncatula HOM05D000147 ORTHO05D004093 1.6e-15 87.0 105 40.0
Medtr6g016355 Medicago truncatula HOM05D000147 ORTHO05D004093 2.7e-15 86.3 75 49.3
Medtr8g031800 Medicago truncatula HOM05D000147 ORTHO05D004093 2.7e-15 86.3 94 43.6
Medtr1g074090 Medicago truncatula HOM05D000147 ORTHO05D004093 3.6e-15 85.9 85 43.5
Medtr7g063280 Medicago truncatula HOM05D000147 ORTHO05D004093 7.9e-15 84.7 97 38.1
Psat6g221120 Pisum sativum HOM05D000147 ORTHO05D004093 1.0e-14 84.3 115 38.3
Medtr4g029360 Medicago truncatula HOM05D000147 ORTHO05D004093 1.4e-14 84.0 117 36.8
Medtr8g099580 Medicago truncatula HOM05D000147 ORTHO05D004093 1.8e-14 83.6 100 43.0
TPR.G14874 Trifolium pratense HOM05D000147 ORTHO05D004093 5.1e-14 82.0 102 43.1
Medtr1g017840 Medicago truncatula HOM05D000147 ORTHO05D004093 6.7e-14 81.6 153 32.7
Medtr2g451430 Medicago truncatula HOM05D000147 ORTHO05D004093 6.7e-14 81.6 68 54.4
Medtr2g059470 Medicago truncatula HOM05D000147 ORTHO05D004093 2.6e-13 79.7 83 43.4
Medtr8g031080 Medicago truncatula HOM05D000147 ORTHO05D004093 5.7e-13 78.6 94 47.9
Medtr8g038340 Medicago truncatula HOM05D000147 ORTHO05D004093 1.7e-12 77.0 77 46.8
Medtr8g098925 Medicago truncatula HOM05D000147 ORTHO05D004093 2.2e-12 76.6 145 33.1
Medtr2g438450 Medicago truncatula HOM05D000147 ORTHO05D004093 3.7e-12 75.9 88 43.2
Medtr1g109000 Medicago truncatula HOM05D000147 ORTHO05D004093 4.8e-12 75.5 77 42.9
Medtr4g008270 Medicago truncatula HOM05D000147 ORTHO05D004093 4.8e-12 75.5 81 42.0
Medtr0093s0070 Medicago truncatula HOM05D000147 ORTHO05D004093 6.3e-12 75.1 80 41.2
TPR.G5236 Trifolium pratense HOM05D000003 ORTHO05D004093 8.2e-12 74.7 106 41.5
Medtr8g022750 Medicago truncatula HOM05D000147 ORTHO05D004093 3.1e-11 72.8 114 35.1
Medtr1g062840 Medicago truncatula HOM05D000147 ORTHO05D004093 5.3e-11 72.0 57 54.4
Medtr4g046027 Medicago truncatula HOM05D000147 ORTHO05D004093 5.3e-11 72.0 63 49.2
SHI39371 Sapria himalayana HOM05D000003 ORTHO05D000167 7.0e-11 71.6 107 39.3
Medtr8g036780 Medicago truncatula HOM05D000147 ORTHO05D004093 9.1e-11 71.2 87 43.7
Medtr1g099430 Medicago truncatula HOM05D000147 ORTHO05D004093 1.2e-10 70.9 93 38.7
Medtr8g088220 Medicago truncatula HOM05D000147 ORTHO05D004093 1.2e-10 70.9 74 47.3
Medtr8g079540 Medicago truncatula HOM05D000147 ORTHO05D004093 2.6e-10 69.7 92 40.2
Medtr1g018300 Medicago truncatula HOM05D000147 ORTHO05D004093 3.5e-10 69.3 105 38.1
Medtr8g045330 Medicago truncatula HOM05D000147 ORTHO05D004093 3.5e-10 69.3 98 38.8
Medtr2g047100 Medicago truncatula HOM05D000147 ORTHO05D004093 5.9e-10 68.6 112 36.6
Medtr7g053400 Medicago truncatula HOM05D000147 ORTHO05D004093 7.7e-10 68.2 58 58.6
TWI56G1451 Tripterygium wilfordii HOM05D000003 ORTHO05D000167 7.7e-10 68.2 125 32.0
Medtr3g026270 Medicago truncatula HOM05D000147 ORTHO05D004093 1.3e-09 67.4 54 59.3
Medtr5g075610 Medicago truncatula HOM05D000147 ORTHO05D004093 1.7e-09 67.0 88 44.3
Medtr3g462490 Medicago truncatula HOM05D000327 ORTHO05D000218 2.2e-09 66.6 70 45.7
Medtr6g033225 Medicago truncatula HOM05D000147 ORTHO05D004093 2.2e-09 66.6 83 37.3
Medtr7g006470 Medicago truncatula HOM05D000147 ORTHO05D004093 2.2e-09 66.6 103 34.0
RcHm_v2.0_Chr5g0047711 Rosa chinensis HOM05D008833 ORTHO05D000167 2.2e-09 66.6 102 34.3
Medtr1g022215 Medicago truncatula HOM05D000147 ORTHO05D004093 3.8e-09 65.9 81 40.7
Medtr4g094272 Medicago truncatula HOM05D000147 ORTHO05D004093 8.5e-09 64.7 68 47.1
Psat5g003480 Pisum sativum HOM05D000147 ORTHO05D004093 8.5e-09 64.7 116 37.1
Medtr1g074240 Medicago truncatula HOM05D000147 ORTHO05D004093 1.1e-08 64.3 65 44.6
Medtr6g045427 Medicago truncatula HOM05D000147 ORTHO05D004093 1.1e-08 64.3 126 31.0
Medtr3g465840 Medicago truncatula HOM05D000826 ORTHO05D001831 1.5e-08 63.9 70 42.9
Nn1g02030 Nelumbo nucifera HOM05D000003 ORTHO05D004093 1.5e-08 63.9 101 35.6
Gorai.010G200800 Gossypium raimondii HOM05D026746 ORTHO05D036022 1.9e-08 63.5 103 32.0
Medtr1g045560 Medicago truncatula HOM05D000147 ORTHO05D004093 1.9e-08 63.5 60 51.7
CANSAT35G1169 Cannabis sativa HOM05D000003 ORTHO05D000167 2.5e-08 63.2 179 26.8
Medtr6g046670 Medicago truncatula HOM05D000147 ORTHO05D004093 2.5e-08 63.2 74 43.2
Medtr7g006380 Medicago truncatula HOM05D000147 ORTHO05D004093 7.2e-08 61.6 110 31.8
SHI30067 Sapria himalayana HOM05D000003 ORTHO05D000167 9.4e-08 61.2 102 35.3
TPR.G11037 Trifolium pratense HOM05D000147 ORTHO05D004093 9.4e-08 61.2 55 52.7
Lju470C9T6 Lonicera japonica HOM05D000003 ORTHO05D000167 2.7e-07 59.7 103 29.1
Medtr2g017550 Medicago truncatula HOM05D000147 ORTHO05D004093 2.7e-07 59.7 81 35.8
Medtr7g072030 Medicago truncatula HOM05D000147 ORTHO05D004093 2.7e-07 59.7 50 46.0
Medtr2g011830 Medicago truncatula HOM05D000147 ORTHO05D004093 3.6e-07 59.3 70 47.1
Medtr6g016135 Medicago truncatula HOM05D000147 ORTHO05D004093 3.6e-07 59.3 66 47.0
PSO170G0614 Papaver somniferum HOM05D003407 ORTHO05D001026 4.7e-07 58.9 87 37.9
CANSAT56G1530 Cannabis sativa HOM05D000003 ORTHO05D000167 6.1e-07 58.5 156 26.9
Medtr5g069700 Medicago truncatula HOM05D000147 ORTHO05D004093 8.0e-07 58.2 59 40.7
PSO478G1036 Papaver somniferum HOM05D003407 ORTHO05D001026 8.0e-07 58.2 91 38.5
Manes.10G073737 Manihot esculenta HOM05D000003 ORTHO05D000004 1.0e-06 57.8 108 29.6
PSO675G1801 Papaver somniferum HOM05D000003 ORTHO05D001026 1.0e-06 57.8 123 29.3
Medtr5g091440 Medicago truncatula HOM05D000147 ORTHO05D004093 1.4e-06 57.4 74 33.8
PSO731G0081 Papaver somniferum HOM05D003407 ORTHO05D001026 1.4e-06 57.4 129 32.6
Medtr1g079820 Medicago truncatula HOM05D000147 ORTHO05D004093 1.8e-06 57.0 76 38.2
PSO339G4589 Papaver somniferum HOM05D000003 ORTHO05D001026 1.8e-06 57.0 91 35.2
PSO170G1352 Papaver somniferum HOM05D000003 ORTHO05D001026 2.3e-06 56.6 98 31.6
PSO339G1836 Papaver somniferum HOM05D003407 ORTHO05D001026 3.0e-06 56.2 100 34.0
PSO732G0248 Papaver somniferum HOM05D003407 ORTHO05D001026 3.0e-06 56.2 121 33.1
PSO302G0212 Papaver somniferum HOM05D000003 ORTHO05D001026 4.0e-06 55.8 82 39.0
QL01p007248 Quercus lobata HOM05D000003 ORTHO05D000022 4.0e-06 55.8 105 34.3
CANSAT21G0879 Cannabis sativa HOM05D000003 ORTHO05D000004 5.2e-06 55.5 100 33.0
Duzib132G0669 Durio zibethinus HOM05D000003 ORTHO05D000167 5.2e-06 55.5 105 27.6
Medtr2g055490 Medicago truncatula HOM05D000147 ORTHO05D004093 5.2e-06 55.5 66 40.9
Medtr1g054905 Medicago truncatula HOM05D000147 ORTHO05D004093 6.7e-06 55.1 64 42.2
Medtr7g078610 Medicago truncatula HOM05D000147 ORTHO05D004093 6.7e-06 55.1 63 42.9
PSO210G4441 Papaver somniferum HOM05D000003 ORTHO05D001026 6.7e-06 55.1 93 30.1
PSO541G0547 Papaver somniferum HOM05D000003 ORTHO05D001026 6.7e-06 55.1 86 36.0
Lj6C771G2 Lonicera japonica HOM05D003003 ORTHO05D009423 8.8e-06 54.7 101 28.7
Medtr4g094370 Medicago truncatula HOM05D000147 ORTHO05D004093 8.8e-06 54.7 55 45.5
QL09p001270 Quercus lobata HOM05D000003 ORTHO05D000167 8.8e-06 54.7 126 31.0


User provided reference genes

Program Settings