Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g040915 Medicago truncatula HOM05D000716 ORTHO05D020342 6.2e-160 567.4 283 100.0
Medtr1g040985 Medicago truncatula HOM05D000716 ORTHO05D020342 1.2e-51 207.6 175 64.6
TPR.G32765 Trifolium pratense HOM05D000716 ORTHO05D009512 8.4e-48 194.9 246 50.0
TPR.G15873 Trifolium pratense HOM05D000716 ORTHO05D020342 3.3e-44 183.0 265 44.9
TPR.G30952 Trifolium pratense HOM05D000716 ORTHO05D020342 5.6e-44 182.2 259 47.5
Glyma.02G001400 Glycine max HOM05D000716 ORTHO05D009512 1.5e-41 174.1 246 45.1
Medtr1g040955 Medicago truncatula HOM05D000716 ORTHO05D020342 1.1e-39 167.9 96 85.4
Psat0s152g0120 Pisum sativum HOM05D000716 ORTHO05D009512 1.0e-37 161.4 484 32.2
TPR.G14029 Trifolium pratense HOM05D000716 ORTHO05D009512 2.1e-35 153.7 255 40.0
Glyma.10G179500 Glycine max HOM05D000716 ORTHO05D009512 3.7e-35 152.9 245 41.2
Lalb_Chr06g0168971 Lupinus albus HOM05D000716 ORTHO05D009512 4.8e-35 152.5 247 41.3
Lj5g0002941 Lotus japonicus HOM05D000716 ORTHO05D009512 6.2e-35 152.1 245 40.4
Medtr1g076400 Medicago truncatula HOM05D000716 ORTHO05D009512 9.0e-34 148.3 245 40.8
Psat6g113600 Pisum sativum HOM05D000716 ORTHO05D009512 3.4e-33 146.4 245 40.8
Ca_09881_v3 Cicer arietinum L. HOM05D000716 ORTHO05D009512 7.6e-33 145.2 245 39.6
Phvul.003G138252 Phaseolus vulgaris HOM05D000716 ORTHO05D009512 7.6e-33 145.2 245 40.4
arahy.Tifrunner.gnm1.ann1.430W4N Arachis hypogaea HOM05D000716 ORTHO05D009512 4.9e-32 142.5 245 40.4
arahy.Tifrunner.gnm1.ann1.FW0N61 Arachis hypogaea HOM05D000716 ORTHO05D009512 8.4e-32 141.7 245 40.4
Psat6g136800 Pisum sativum HOM05D003763 ORTHO05D004315 1.1e-31 141.4 114 68.4
Cfa008405 Carpinus fangiana HOM05D000716 ORTHO05D009512 3.2e-31 139.8 243 38.3
Glyma.10G001766 Glycine max HOM05D000716 ORTHO05D020342 1.5e-28 131.0 117 63.2
CiPaw.02G118200 Carya illinoinensis HOM05D000716 ORTHO05D009512 3.3e-28 129.8 244 38.1
VMungo0720G2630 Vigna mungo HOM05D000716 ORTHO05D009512 7.4e-28 128.6 245 37.6
Haze_11263 Corylus avellana HOM05D000716 ORTHO05D009512 9.6e-28 128.3 232 38.8
QL06p014932 Quercus lobata HOM05D000716 ORTHO05D009512 5.3e-26 122.5 96 66.7
Atru.chr4.2291 Acer truncatum HOM05D000716 ORTHO05D009512 1.2e-25 121.3 244 36.5
COL.COLO4_15759 Corchorus olitorius HOM05D000716 ORTHO05D009512 2.0e-25 120.6 245 35.5
Duzib212G0257 Durio zibethinus HOM05D000716 ORTHO05D009512 3.4e-25 119.8 245 33.9
Thecc.04G243000 Theobroma cacao HOM05D000716 ORTHO05D009512 3.4e-25 119.8 245 34.3
Prupe.1G025700 Prunus persica HOM05D000716 ORTHO05D009512 4.5e-25 119.4 245 33.9
Potri.010G079200 Populus trichocarpa HOM05D000716 ORTHO05D009512 7.6e-25 118.6 245 34.7
CANSAT78G2038 Cannabis sativa HOM05D000716 ORTHO05D009512 1.0e-24 118.2 244 33.6
Sabra10G0063700 Salix brachista HOM05D000716 ORTHO05D009512 1.7e-24 117.5 244 34.4
Gohir.D09G223600 Gossypium hirsutum HOM05D000716 ORTHO05D009512 1.4e-23 114.4 253 33.2
Gorai.006G245100 Gossypium raimondii HOM05D000716 ORTHO05D009512 1.4e-23 114.4 357 28.9
FvH4_4g01981 Fragaria vesca HOM05D000716 ORTHO05D009512 2.5e-23 113.6 243 33.7
FAN12G4304 Fragaria x ananassa HOM05D000716 ORTHO05D009512 2.5e-23 113.6 243 33.7
TAR365G0786 Trochodendron aralioides HOM05D000716 ORTHO05D009512 2.5e-23 113.6 241 36.1
Gohir.A09G221500 Gossypium hirsutum HOM05D000716 ORTHO05D009512 3.2e-23 113.2 357 28.9
Ciclev10004235m.g Citrus clementina HOM05D000716 ORTHO05D009512 4.2e-23 112.8 242 34.3
Manes.04G103400 Manihot esculenta HOM05D000716 ORTHO05D009512 4.2e-23 112.8 96 63.5
RcHm_v2.0_Chr4g0388951 Rosa chinensis HOM05D000716 ORTHO05D009512 5.5e-23 112.5 243 33.7
Psat1g100320 Pisum sativum HOM05D000716 ORTHO05D009512 1.2e-22 111.3 69 85.5
FAN22G1663 Fragaria x ananassa HOM05D000716 ORTHO05D009512 4.6e-22 109.4 243 32.9
Dinv44606 Davidia involucrata HOM05D000716 ORTHO05D009512 1.8e-21 107.5 95 60.0
Eucgr.H03185 Eucalyptus grandis HOM05D000716 ORTHO05D009512 2.3e-21 107.1 244 33.2
GSVIVG01018088001 Vitis vinifera HOM05D000716 ORTHO05D009512 2.3e-21 107.1 242 33.1
Lj6P652T26 Lonicera japonica HOM05D000716 ORTHO05D009512 5.7e-20 102.4 95 61.1
Psat4g152440 Pisum sativum HOM05D000716 ORTHO05D009512 9.7e-20 101.7 69 79.7
PGR004G1429 Punica granatum HOM05D000716 ORTHO05D009512 9.7e-20 101.7 243 30.5
MD13G1203200 Malus domestica HOM05D000716 ORTHO05D009512 1.3e-19 101.3 93 55.9
MD16G1204600 Malus domestica HOM05D000716 ORTHO05D009512 1.3e-19 101.3 96 57.3
Actinidia05472 Actinidia chinensis HOM05D000716 ORTHO05D009512 2.2e-19 100.5 242 32.2
CSS0040365 Camellia sinensis var. sinensis HOM05D000716 ORTHO05D009512 6.3e-19 99.0 95 56.8
CSS0039216 Camellia sinensis var. sinensis HOM05D000716 ORTHO05D009512 4.1e-18 96.3 95 55.8
Rhsim02G0032200 Rhododendron simsii HOM05D000716 ORTHO05D009512 5.3e-18 95.9 113 48.7
Psat0s152g0160 Pisum sativum HOM05D000716 ORTHO05D009512 6.9e-18 95.5 63 79.4
vmacro15398 Vaccinium macrocarpon HOM05D000716 ORTHO05D009512 2.6e-17 93.6 95 54.7
CSS0012551 Camellia sinensis var. sinensis HOM05D000716 ORTHO05D009512 1.3e-16 91.3 68 69.1
Psat4g152480 Pisum sativum HOM05D000716 ORTHO05D009512 1.7e-16 90.9 69 72.5
DCAR_024195 Daucus carota HOM05D000716 ORTHO05D009512 2.2e-16 90.5 95 51.6
CSS0035052 Camellia sinensis var. sinensis HOM05D000716 ORTHO05D009512 3.8e-16 89.7 123 46.3
Cpa.g.sc58.16 Carica papaya HOM05D000716 ORTHO05D009512 3.8e-16 89.7 69 65.2
Lj6A652T29 Lonicera japonica HOM05D000716 ORTHO05D009512 1.9e-15 87.4 68 69.1
Oeu032619.1 Olea europaea HOM05D000716 ORTHO05D009512 1.9e-15 87.4 72 62.5
Aqoxy2G03501 Aquilegia oxysepala HOM05D000716 ORTHO05D009512 2.5e-15 87.0 133 42.1
CAN.G749.27 Capsicum annuum HOM05D000716 ORTHO05D009512 4.2e-15 86.3 68 64.7
Nitab4.5_0001856g0060 Nicotiana tabacum HOM05D000716 ORTHO05D009512 5.5e-15 85.9 113 46.9
PGSC0003DMG400006102 Solanum tuberosum HOM05D000716 ORTHO05D009512 9.4e-15 85.1 68 64.7
Migut.N00228 Erythranthe guttata HOM05D000716 ORTHO05D009512 1.2e-14 84.7 89 55.1
Cpa.g.sc58.13 Carica papaya HOM05D000716 ORTHO05D020342 2.1e-14 84.0 90 50.0
Cc03_g04580 Coffea canephora HOM05D000716 ORTHO05D009512 2.1e-14 84.0 113 46.9
Nitab4.5_0001787g0020 Nicotiana tabacum HOM05D000716 ORTHO05D009512 2.7e-14 83.6 111 46.8
Peaxi162Scf00788g00218 Petunia axillaris HOM05D000716 ORTHO05D009512 2.7e-14 83.6 68 64.7
MSTRG.21886 Avicennia marina HOM05D000716 ORTHO05D009512 3.6e-14 83.2 68 61.8
TPR.G21298 Trifolium pratense HOM05D001538 ORTHO05D000007 3.6e-14 83.2 138 42.8
Solyc09g083060.4 Solanum lycopersicum HOM05D000716 ORTHO05D009512 4.6e-14 82.8 68 63.2
Sopen09g031940 Solanum pennellii HOM05D000716 ORTHO05D009512 4.6e-14 82.8 68 63.2
PSO461G0082 Papaver somniferum HOM05D000716 ORTHO05D009512 1.0e-13 81.6 94 51.1
HanXRQChr13g0424651 Helianthus annuus HOM05D000716 ORTHO05D009512 1.8e-13 80.9 243 29.2
Psat6g136840 Pisum sativum HOM05D000716 ORTHO05D009512 1.8e-13 80.9 73 56.2
ECA240G2824 Erigeron canadensis HOM05D000716 ORTHO05D009512 3.0e-13 80.1 93 49.5
Psat4g201640 Pisum sativum HOM05D000716 ORTHO05D009512 3.0e-13 80.1 93 51.6
Lsat_1_v5_gn_3_124900 Lactuca sativa HOM05D000716 ORTHO05D009512 9.7e-12 75.1 68 55.9
ATR0665G362 Amborella trichopoda HOM05D000716 ORTHO05D009512 1.7e-11 74.3 68 52.9
Nn3g19490 Nelumbo nucifera HOM05D000716 ORTHO05D009512 1.7e-11 74.3 69 56.5
CDE07G1951 Ceratophyllum demersum HOM05D000716 ORTHO05D009512 3.7e-11 73.2 92 47.8
SEGI_36693 Sequoiadendron giganteum HOM05D000716 ORTHO05D009512 1.1e-10 71.6 69 55.1
SGA_v2.0_scaffold79G25617 Striga asiatica HOM05D000716 ORTHO05D009512 1.4e-10 71.2 92 46.7
Psat6g136880 Pisum sativum HOM05D000716 ORTHO05D009512 1.3e-08 64.7 50 70.0
Psat4g201760 Pisum sativum HOM05D000716 ORTHO05D009512 2.7e-06 57.0 48 56.2
AagrBONN_evm.TU.Sc2ySwM_228.2518 Anthoceros agrestis HOM05D000716 ORTHO05D004822 4.7e-06 56.2 144 29.2


User provided reference genes

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