Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g040655 Medicago truncatula HOM05D001200 ORTHO05D002731 8.9e-63 243.4 123 100.0
Medtr4g128700 Medicago truncatula HOM05D001200 ORTHO05D002731 3.8e-21 105.1 65 92.3
Medtr3g109440 Medicago truncatula HOM05D001200 ORTHO05D002731 6.5e-21 104.4 66 87.9
Medtr8g056200 Medicago truncatula HOM05D001200 ORTHO05D002731 4.2e-20 101.7 71 80.3
Medtr5g464700 Medicago truncatula HOM05D001200 ORTHO05D002731 7.2e-20 100.9 65 87.7
Medtr4g006120 Medicago truncatula HOM05D001200 ORTHO05D002731 2.7e-19 99.0 63 88.9
Medtr4g050950 Medicago truncatula HOM05D001200 ORTHO05D002731 2.7e-19 99.0 63 88.9
Medtr7g044990 Medicago truncatula HOM05D001200 ORTHO05D002731 2.3e-18 95.9 66 81.8
Medtr2g042860 Medicago truncatula HOM05D001200 ORTHO05D002731 3.0e-18 95.5 66 83.3
Medtr2g048620 Medicago truncatula HOM05D001200 ORTHO05D002731 3.9e-18 95.1 114 57.0
Medtr4g080900 Medicago truncatula HOM05D001200 ORTHO05D002731 3.9e-18 95.1 66 83.3
Medtr5g099080 Medicago truncatula HOM05D001200 ORTHO05D002731 3.9e-18 95.1 76 75.0
TPR.G24765 Trifolium pratense HOM05D001200 ORTHO05D002731 1.1e-17 93.6 63 82.5
Medtr5g089040 Medicago truncatula HOM05D001200 ORTHO05D002731 5.7e-17 91.3 66 81.8
arahy.Tifrunner.gnm1.ann1.2QK9Z7 Arachis hypogaea HOM05D001200 ORTHO05D002731 4.8e-16 88.2 67 71.6
Phvul.002G050301 Phaseolus vulgaris HOM05D001200 ORTHO05D002731 8.2e-16 87.4 63 79.4
Sed0012006 Sechium edule HOM05D001200 ORTHO05D002731 8.2e-16 87.4 63 77.8
BcaC03g16699 Brassica carinata HOM05D001200 ORTHO05D002731 1.2e-14 83.6 63 74.6
C09p24620 Brassica napus HOM05D001200 ORTHO05D002731 1.2e-14 83.6 63 74.6
C09p40370 Brassica napus HOM05D001200 ORTHO05D002731 1.2e-14 83.6 63 74.6
BolC2t10611H Brassica oleracea HOM05D001200 ORTHO05D002731 1.2e-14 83.6 63 74.6
BolSC29t60504H Brassica oleracea HOM05D001200 ORTHO05D002731 1.2e-14 83.6 63 74.6
BolSC35t60702H Brassica oleracea HOM05D001200 ORTHO05D002731 1.2e-14 83.6 63 74.6
BolSC37t60791H Brassica oleracea HOM05D001200 ORTHO05D002731 1.2e-14 83.6 63 74.6
BraSC179t45776Z Brassica rapa HOM05D001200 ORTHO05D002731 1.2e-14 83.6 63 74.6
BraSC59t46549Z Brassica rapa HOM05D001200 ORTHO05D002731 1.2e-14 83.6 63 74.6
RcHm_v2.0_Chr5g0017231 Rosa chinensis HOM05D001200 ORTHO05D002731 1.2e-14 83.6 63 73.0
RcHm_v2.0_Chr5g0043051 Rosa chinensis HOM05D001200 ORTHO05D002731 1.5e-14 83.2 63 71.4
Gohir.1Z049731 Gossypium hirsutum HOM05D001200 ORTHO05D002731 2.0e-14 82.8 63 73.0
Gohir.A01G143400 Gossypium hirsutum HOM05D001200 ORTHO05D002731 2.0e-14 82.8 63 73.0
Gohir.A02G134201 Gossypium hirsutum HOM05D001200 ORTHO05D010401 2.0e-14 82.8 63 73.0
EL10As15g24100 Beta vulgaris HOM05D001200 ORTHO05D002731 2.6e-14 82.4 63 71.4
EL10As15g24137 Beta vulgaris HOM05D001200 ORTHO05D002731 2.6e-14 82.4 63 71.4
CARHR282420 Cardamine hirsuta HOM05D001200 ORTHO05D002731 2.6e-14 82.4 62 74.2
Nn064s42212 Nelumbo nucifera HOM05D001200 ORTHO05D002731 2.6e-14 82.4 63 74.6
Medtr3g098750 Medicago truncatula HOM05D003236 ORTHO05D003620 4.5e-14 81.6 54 87.0
C06p42250 Brassica napus HOM05D001200 ORTHO05D002731 5.9e-14 81.3 61 73.8
Medtr2g103350 Medicago truncatula HOM05D001200 ORTHO05D002731 5.9e-14 81.3 48 89.6
Gorai.006G071400 Gossypium raimondii HOM05D001200 ORTHO05D002731 7.7e-14 80.9 63 71.4
DCAR_032536 Daucus carota HOM05D001200 ORTHO05D002731 1.3e-13 80.1 62 71.0
Lalb_Chr07g0191751 Lupinus albus HOM05D001200 ORTHO05D002731 1.3e-13 80.1 67 70.1
HanXRQChr00c0196g0572481 Helianthus annuus HOM05D001200 ORTHO05D002731 1.7e-13 79.7 62 71.0
HanXRQChr00c0690g0576761 Helianthus annuus HOM05D001200 ORTHO05D002731 1.7e-13 79.7 62 71.0
HanXRQChr02g0059711 Helianthus annuus HOM05D001200 ORTHO05D002731 1.7e-13 79.7 62 71.0
HanXRQChr03g0073091 Helianthus annuus HOM05D001200 ORTHO05D002731 1.7e-13 79.7 62 71.0
HanXRQChr05g0152431 Helianthus annuus HOM05D001200 ORTHO05D002731 1.7e-13 79.7 62 71.0
HanXRQChr06g0183001 Helianthus annuus HOM05D001200 ORTHO05D002731 1.7e-13 79.7 62 71.0
HanXRQChr09g0258521 Helianthus annuus HOM05D001200 ORTHO05D002731 1.7e-13 79.7 62 71.0
HanXRQChr11g0323741 Helianthus annuus HOM05D001200 ORTHO05D002731 1.7e-13 79.7 62 71.0
HanXRQCPg0580351 Helianthus annuus HOM05D001200 ORTHO05D002731 1.7e-13 79.7 62 71.0
Peaxi162Scf00030g02118 Petunia axillaris HOM05D001200 ORTHO05D002731 1.7e-13 79.7 62 72.6
Peaxi162Scf01164g00035 Petunia axillaris HOM05D001200 ORTHO05D002731 1.7e-13 79.7 62 72.6
PGSC0003DMG400020539 Solanum tuberosum HOM05D001200 ORTHO05D002731 1.7e-13 79.7 63 69.8
PGSC0003DMG401011339 Solanum tuberosum HOM05D001200 ORTHO05D002731 1.7e-13 79.7 63 69.8
Migut.D01384 Erythranthe guttata HOM05D001200 ORTHO05D002731 2.2e-13 79.3 63 68.3
SalBow1G7634 Salvia bowleyana HOM05D001200 ORTHO05D002731 2.9e-13 79.0 62 69.4
Ciclev10013974m.g Citrus clementina HOM05D001200 ORTHO05D002731 3.8e-13 78.6 63 68.3
Ciclev10027631m.g Citrus clementina HOM05D001200 ORTHO05D002731 3.8e-13 78.6 63 68.3
Ciclev10027650m.g Citrus clementina HOM05D001200 ORTHO05D002731 3.8e-13 78.6 63 68.3
Gohir.A13G109925 Gossypium hirsutum HOM05D001200 ORTHO05D002731 3.8e-13 78.6 56 75.0
Medtr7g012690 Medicago truncatula HOM05D001200 ORTHO05D002731 3.8e-13 78.6 76 61.8
Lj2P1238T97 Lonicera japonica HOM05D001200 ORTHO05D002731 5.0e-13 78.2 67 67.2
Medtr0002s0170 Medicago truncatula HOM05D001200 ORTHO05D002731 3.2e-12 75.5 63 65.1
Medtr7g108460 Medicago truncatula HOM05D001200 ORTHO05D002731 4.2e-12 75.1 48 83.3
Solyc11g021213.1 Solanum lycopersicum HOM05D001200 ORTHO05D002731 4.2e-12 75.1 63 66.7
Medtr5g094180 Medicago truncatula HOM05D001200 ORTHO05D002731 5.5e-12 74.7 48 83.3
Medtr7g086590 Medicago truncatula HOM05D001200 ORTHO05D002731 7.2e-12 74.3 54 77.8
MD04G1189100 Malus domestica HOM05D001200 ORTHO05D002731 2.1e-11 72.8 63 66.7
Medtr3g073110 Medicago truncatula HOM05D001200 ORTHO05D002731 2.7e-11 72.4 48 81.2
Medtr0148s0110 Medicago truncatula HOM05D001200 ORTHO05D002731 3.6e-11 72.0 46 84.8
Medtr4g106580 Medicago truncatula HOM05D001200 ORTHO05D002731 6.1e-11 71.2 48 81.2
Medtr5g021300 Medicago truncatula HOM05D001200 ORTHO05D002731 7.9e-11 70.9 50 78.0
Medtr8g086440 Medicago truncatula HOM05D001200 ORTHO05D002731 7.9e-11 70.9 48 77.1
HanXRQChr00c0328g0573601 Helianthus annuus HOM05D001200 ORTHO05D002731 1.4e-10 70.1 54 70.4
Medtr3g114440 Medicago truncatula HOM05D001200 ORTHO05D002731 1.4e-10 70.1 54 74.1
BolSC46t60960H Brassica oleracea HOM05D001200 ORTHO05D002731 2.3e-10 69.3 48 75.0
Medtr8g085370 Medicago truncatula HOM05D001200 ORTHO05D002731 2.3e-10 69.3 47 80.9
Solyc01g065610.1 Solanum lycopersicum HOM05D001200 ORTHO05D002731 2.3e-10 69.3 63 66.7
Medtr1g081540 Medicago truncatula HOM05D001200 ORTHO05D002731 3.0e-10 68.9 88 51.1
SEGI_13011 Sequoiadendron giganteum HOM05D001200 ORTHO05D002731 3.9e-10 68.6 63 58.7
Medtr7g021720 Medicago truncatula HOM05D001200 ORTHO05D002731 5.1e-10 68.2 63 68.3
Nitab4.5_0001342g0130 Nicotiana tabacum HOM05D001200 ORTHO05D002731 5.1e-10 68.2 63 61.9
HanXRQChr07g0204721 Helianthus annuus HOM05D001200 ORTHO05D002731 6.7e-10 67.8 62 59.7
Medtr7g112630 Medicago truncatula HOM05D001200 ORTHO05D002731 1.1e-09 67.0 47 76.6
BolC7t43854H Brassica oleracea HOM05D001200 ORTHO05D002731 2.0e-09 66.2 44 79.5
Ciclev10013969m.g Citrus clementina HOM05D001200 ORTHO05D002731 3.3e-09 65.5 46 71.7
Medtr1g103000 Medicago truncatula HOM05D001200 ORTHO05D002731 3.3e-09 65.5 42 81.0
Medtr5g032430 Medicago truncatula HOM05D001200 ORTHO05D002731 3.3e-09 65.5 42 81.0
Medtr4g086110 Medicago truncatula HOM05D001200 ORTHO05D002731 4.8e-08 61.6 47 74.5
Medtr8g087010 Medicago truncatula HOM05D001200 ORTHO05D002731 1.8e-07 59.7 66 57.6
Lsat_1_v5_gn_1_14200 Lactuca sativa HOM05D001200 ORTHO05D002731 2.4e-07 59.3 42 69.0
Hund08793 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.4e-07 59.3 42 66.7
Hund12716 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.4e-07 59.3 42 66.7
Hund12843 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.4e-07 59.3 42 66.7
Hund23968 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.4e-07 59.3 42 66.7
Hund27631 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.4e-07 59.3 42 66.7
Hund27678 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.4e-07 59.3 42 66.7
Hund27755 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.4e-07 59.3 42 66.7
Hund27831 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.4e-07 59.3 42 66.7
Hund28330 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.4e-07 59.3 42 66.7
Hund28438 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.4e-07 59.3 42 66.7
Hund28448 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.4e-07 59.3 42 66.7
Hund28536 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.4e-07 59.3 42 66.7
Hund28587 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.4e-07 59.3 42 66.7
Hund28596 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.4e-07 59.3 42 66.7
Hund28613 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.4e-07 59.3 42 66.7
Hund28850 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.4e-07 59.3 42 66.7
Hund28880 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.4e-07 59.3 42 66.7
Hund28937 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.4e-07 59.3 42 66.7
Hund28946 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.4e-07 59.3 42 66.7
Hund28951 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.4e-07 59.3 42 66.7
Hund28954 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.4e-07 59.3 42 66.7
Hund28961 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.4e-07 59.3 42 66.7
Hund28974 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.4e-07 59.3 42 66.7
Hund28979 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.4e-07 59.3 42 66.7
Hund29026 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.4e-07 59.3 42 66.7
Hund29089 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.4e-07 59.3 42 66.7
Hund29109 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.4e-07 59.3 42 66.7
Hund29179 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.4e-07 59.3 42 66.7
Hund29186 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.4e-07 59.3 42 66.7
Hund29244 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.4e-07 59.3 42 66.7
Hund29247 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.4e-07 59.3 42 66.7
Hund29251 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.4e-07 59.3 42 66.7
Hund29254 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.4e-07 59.3 42 66.7
Hund29261 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.4e-07 59.3 42 66.7
Hund29273 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.4e-07 59.3 42 66.7
Hund29277 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.4e-07 59.3 42 66.7
Hund29281 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.4e-07 59.3 42 66.7
Hund29285 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.4e-07 59.3 42 66.7
Hund29288 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.4e-07 59.3 42 66.7
Hund29316 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.4e-07 59.3 42 66.7
Hund29434 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.4e-07 59.3 42 66.7
Hund29438 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.4e-07 59.3 42 66.7
Hund29453 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.4e-07 59.3 42 66.7
Hund29499 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.4e-07 59.3 42 66.7
Hund29654 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.4e-07 59.3 42 66.7
Hund29713 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.4e-07 59.3 42 66.7
Hund29755 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.4e-07 59.3 42 66.7
Hund29814 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.4e-07 59.3 42 66.7
Hund29818 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.4e-07 59.3 42 66.7
Hund30036 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.4e-07 59.3 42 66.7
Hund30039 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.4e-07 59.3 42 66.7
Hund30120 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.4e-07 59.3 42 66.7
Hund30177 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.4e-07 59.3 42 66.7
Hund30365 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.4e-07 59.3 42 66.7
Hund30388 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.4e-07 59.3 42 66.7
Medtr2g047260 Medicago truncatula HOM05D001200 ORTHO05D002731 4.1e-07 58.5 66 59.1
arahy.Tifrunner.gnm1.ann1.FIPJ9G Arachis hypogaea HOM05D001200 ORTHO05D002731 5.3e-07 58.2 41 70.7
Lalb_Chr16g0388551 Lupinus albus HOM05D001200 ORTHO05D002731 7.0e-07 57.8 52 67.3
Solyc01g065585.1 Solanum lycopersicum HOM05D001200 ORTHO05D002731 9.1e-07 57.4 63 54.0
Hund03917 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.2e-06 57.0 59 54.2
HanXRQChr01g0020071 Helianthus annuus HOM05D001200 ORTHO05D002731 2.6e-06 55.8 47 70.2
Lalb_Chr23g0274791 Lupinus albus HOM05D001200 ORTHO05D002731 3.4e-06 55.5 51 60.8
SabraPtG0005600 Salix brachista HOM05D000533 ORTHO05D006151 3.4e-06 55.5 66 47.0
HanXRQChr17g0557771 Helianthus annuus HOM05D001200 ORTHO05D002731 5.9e-06 54.7 47 68.1
Medtr1g085110 Medicago truncatula HOM05D001200 ORTHO05D002731 7.7e-06 54.3 37 86.5


User provided reference genes

Program Settings