Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g040060 Medicago truncatula HOM05D003716 ORTHO05D006233 2.6e-25 117.9 57 100.0
Medtr1g040120 Medicago truncatula HOM05D003716 ORTHO05D006233 2.6e-17 91.3 50 92.0
Medtr1g040210 Medicago truncatula HOM05D003716 ORTHO05D006233 1.7e-16 88.6 57 80.7
Medtr1g040110 Medicago truncatula HOM05D003716 ORTHO05D006233 6.5e-16 86.7 48 87.5
Medtr1g040050 Medicago truncatula HOM05D003716 ORTHO05D006233 1.1e-15 85.9 45 93.3
Medtr5g019820 Medicago truncatula HOM05D003716 ORTHO05D006233 1.9e-15 85.1 47 89.4
Medtr1g040083 Medicago truncatula HOM05D003716 ORTHO05D006233 3.6e-14 80.9 40 97.5
Glyma.06G203600 Glycine max HOM05D003716 ORTHO05D006233 6.1e-14 80.1 49 79.6
Medtr4g118580 Medicago truncatula HOM05D003716 ORTHO05D006233 7.9e-14 79.7 43 90.7
Gorai.001G025400 Gossypium raimondii HOM05D003716 ORTHO05D006233 1.0e-13 79.3 45 84.4
Gohir.A11G237900 Gossypium hirsutum HOM05D003716 ORTHO05D006233 1.8e-13 78.6 45 82.2
Gorai.001G025100 Gossypium raimondii HOM05D003716 ORTHO05D006233 1.8e-13 78.6 45 82.2
Manes.11G047250 Manihot esculenta HOM05D003716 ORTHO05D006233 1.8e-13 78.6 45 82.2
Medtr1g040087 Medicago truncatula HOM05D003716 ORTHO05D006233 2.3e-13 78.2 39 97.4
Medtr2g101910 Medicago truncatula HOM05D003716 ORTHO05D006233 3.9e-13 77.4 44 88.6
Prupe.8G171300 Prunus persica HOM05D003716 ORTHO05D006233 3.9e-13 77.4 54 70.4
Gohir.D11G248340 Gossypium hirsutum HOM05D003716 ORTHO05D006233 6.7e-13 76.6 45 82.2
Gorai.005G187200 Gossypium raimondii HOM05D003716 ORTHO05D006233 6.7e-13 76.6 45 82.2
Gorai.007G264800 Gossypium raimondii HOM05D003716 ORTHO05D006233 6.7e-13 76.6 45 82.2
Medtr1g040063 Medicago truncatula HOM05D003716 ORTHO05D006233 8.8e-13 76.3 39 92.3
Migut.N02390 Erythranthe guttata HOM05D003716 ORTHO05D006233 1.1e-12 75.9 51 74.5
Oeu018531.1 Olea europaea HOM05D003716 ORTHO05D006233 1.1e-12 75.9 39 94.9
Sabra15G0015100 Salix brachista HOM05D003716 ORTHO05D006233 1.5e-12 75.5 45 80.0
Gohir.D07G024233 Gossypium hirsutum HOM05D003716 ORTHO05D006233 3.3e-12 74.3 38 89.5
Prupe.8G172100 Prunus persica HOM05D003716 ORTHO05D006233 3.3e-12 74.3 45 80.0
Gorai.001G025200 Gossypium raimondii HOM05D003716 ORTHO05D006233 4.3e-12 73.9 39 89.7
Migut.N02117 Erythranthe guttata HOM05D003716 ORTHO05D006233 5.7e-12 73.6 38 89.5
Gohir.A07G022221 Gossypium hirsutum HOM05D003716 ORTHO05D006233 7.4e-12 73.2 41 82.9
Potri.003G175366 Populus trichocarpa HOM05D003716 ORTHO05D006233 7.4e-12 73.2 39 87.2
CiPaw.02G098700 Carya illinoinensis HOM05D003716 ORTHO05D006233 9.7e-12 72.8 42 78.6
Gohir.A07G022217 Gossypium hirsutum HOM05D003716 ORTHO05D006233 9.7e-12 72.8 45 80.0
CiPaw.02G167700 Carya illinoinensis HOM05D003716 ORTHO05D006233 1.7e-11 72.0 38 86.8
Phvul.002G059100 Phaseolus vulgaris HOM05D003716 ORTHO05D006233 1.7e-11 72.0 55 72.7
Gohir.D13G104706 Gossypium hirsutum HOM05D003716 ORTHO05D006233 2.2e-11 71.6 38 86.8
Gorai.013G117300 Gossypium raimondii HOM05D003716 ORTHO05D006233 2.2e-11 71.6 38 86.8
Gohir.D02G057325 Gossypium hirsutum HOM05D003716 ORTHO05D006233 2.8e-11 71.2 39 87.2
Phvul.011G190000 Phaseolus vulgaris HOM05D003716 ORTHO05D006233 2.8e-11 71.2 37 89.2
Gohir.D02G056801 Gossypium hirsutum HOM05D003716 ORTHO05D006233 4.8e-11 70.5 39 84.6
Gorai.005G064400 Gossypium raimondii HOM05D003716 ORTHO05D006233 4.8e-11 70.5 39 84.6
Phvul.003G120550 Phaseolus vulgaris HOM05D003716 ORTHO05D006233 4.8e-11 70.5 39 87.2
Gohir.A02G052302 Gossypium hirsutum HOM05D003716 ORTHO05D006233 6.3e-11 70.1 39 82.1
Gorai.011G076000 Gossypium raimondii HOM05D003716 ORTHO05D006233 6.3e-11 70.1 65 53.8
Phvul.011G146100 Phaseolus vulgaris HOM05D003716 ORTHO05D006233 6.3e-11 70.1 37 89.2
Phvul.011G190900 Phaseolus vulgaris HOM05D003716 ORTHO05D006233 6.3e-11 70.1 37 89.2
Phvul.011G191200 Phaseolus vulgaris HOM05D003716 ORTHO05D006233 6.3e-11 70.1 37 89.2
Glyma.05G176800 Glycine max HOM05D003716 ORTHO05D006233 8.2e-11 69.7 53 66.0
Gohir.D02G057128 Gossypium hirsutum HOM05D003716 ORTHO05D006233 8.2e-11 69.7 39 84.6
CiPaw.02G082200 Carya illinoinensis HOM05D003716 ORTHO05D006233 1.1e-10 69.3 45 75.6
Gohir.1Z049467 Gossypium hirsutum HOM05D003716 ORTHO05D006233 1.1e-10 69.3 65 53.8
Gohir.1Z049528 Gossypium hirsutum HOM05D003716 ORTHO05D006233 1.1e-10 69.3 65 53.8
Gohir.1Z049753 Gossypium hirsutum HOM05D003716 ORTHO05D006233 1.1e-10 69.3 65 53.8
Gohir.1Z049832 Gossypium hirsutum HOM05D003716 ORTHO05D006233 1.1e-10 69.3 65 53.8
Gohir.D10G071248 Gossypium hirsutum HOM05D003716 ORTHO05D006233 1.1e-10 69.3 65 53.8
Gohir.D10G071344 Gossypium hirsutum HOM05D003716 ORTHO05D006233 1.1e-10 69.3 65 53.8
Gohir.D10G071428 Gossypium hirsutum HOM05D003716 ORTHO05D006233 1.1e-10 69.3 65 53.8
Gohir.D02G057566 Gossypium hirsutum HOM05D003716 ORTHO05D006233 1.4e-10 68.9 39 82.1
Gorai.005G062900 Gossypium raimondii HOM05D003716 ORTHO05D006233 1.4e-10 68.9 39 82.1
Gorai.005G065000 Gossypium raimondii HOM05D003716 ORTHO05D006233 1.4e-10 68.9 39 82.1
Gohir.D10G071384 Gossypium hirsutum HOM05D003716 ORTHO05D006233 1.8e-10 68.6 49 63.3
Gohir.1Z049428 Gossypium hirsutum HOM05D003716 ORTHO05D006233 2.4e-10 68.2 42 73.8
Gohir.1Z049632 Gossypium hirsutum HOM05D003716 ORTHO05D006233 2.4e-10 68.2 42 73.8
Gohir.1Z049653 Gossypium hirsutum HOM05D003716 ORTHO05D006233 2.4e-10 68.2 42 73.8
Gohir.D10G071264 Gossypium hirsutum HOM05D003716 ORTHO05D006233 2.4e-10 68.2 42 73.8
Gohir.D10G071336 Gossypium hirsutum HOM05D003716 ORTHO05D006233 2.4e-10 68.2 42 73.8
Phvul.011G166700 Phaseolus vulgaris HOM05D003716 ORTHO05D006233 2.4e-10 68.2 37 86.5
Ciclev10027385m.g Citrus clementina HOM05D003716 ORTHO05D006233 3.1e-10 67.8 41 78.0
Gohir.A02G051801 Gossypium hirsutum HOM05D003716 ORTHO05D006233 4.1e-10 67.4 38 81.6
Gohir.D10G071376 Gossypium hirsutum HOM05D003716 ORTHO05D006233 4.1e-10 67.4 65 50.8
Phvul.007G073700 Phaseolus vulgaris HOM05D003716 ORTHO05D006233 4.1e-10 67.4 36 91.7
Phvul.011G146400 Phaseolus vulgaris HOM05D003716 ORTHO05D006233 4.1e-10 67.4 43 76.7
Gorai.011G075900 Gossypium raimondii HOM05D003716 ORTHO05D006233 5.3e-10 67.0 42 71.4
Gohir.A07G022205 Gossypium hirsutum HOM05D003716 ORTHO05D006233 6.9e-10 66.6 38 81.6
Gohir.D10G071392 Gossypium hirsutum HOM05D003716 ORTHO05D006233 6.9e-10 66.6 65 52.3
Gohir.D10G071456 Gossypium hirsutum HOM05D003716 ORTHO05D006233 6.9e-10 66.6 65 53.8
ClCG03G014910 Citrullus lanatus HOM05D000025 ORTHO05D002339 9.1e-10 66.2 37 81.1
Gohir.A07G022209 Gossypium hirsutum HOM05D003716 ORTHO05D006233 1.2e-09 65.9 38 84.2
Manes.02G142350 Manihot esculenta HOM05D003716 ORTHO05D006233 1.2e-09 65.9 36 86.1
Phvul.011G191100 Phaseolus vulgaris HOM05D003716 ORTHO05D006233 2.0e-09 65.1 36 88.9
Prupe.1G384300 Prunus persica HOM05D003716 ORTHO05D006233 2.0e-09 65.1 39 82.1
SEGI_19543 Sequoiadendron giganteum HOM05D003716 ORTHO05D006233 3.4e-09 64.3 54 61.1
Gohir.A13G101505 Gossypium hirsutum HOM05D003716 ORTHO05D006233 4.5e-09 63.9 38 81.6
Gohir.D11G249166 Gossypium hirsutum HOM05D003716 ORTHO05D006233 4.5e-09 63.9 37 81.1
Prupe.1G117300 Prunus persica HOM05D003716 ORTHO05D006233 4.5e-09 63.9 33 90.9
Gohir.D10G071368 Gossypium hirsutum HOM05D003716 ORTHO05D006233 1.0e-08 62.8 41 68.3
Aqoxy7G01685 Aquilegia oxysepala HOM05D000045 ORTHO05D006233 1.7e-08 62.0 34 88.2
Gohir.D10G071296 Gossypium hirsutum HOM05D003716 ORTHO05D006233 1.7e-08 62.0 39 71.8
Gohir.D10G071304 Gossypium hirsutum HOM05D003716 ORTHO05D006233 1.7e-08 62.0 39 71.8
Gohir.D10G071328 Gossypium hirsutum HOM05D003716 ORTHO05D006233 1.7e-08 62.0 39 71.8
Gohir.D10G071414 Gossypium hirsutum HOM05D003716 ORTHO05D006233 1.7e-08 62.0 39 71.8
Gohir.D10G071442 Gossypium hirsutum HOM05D003716 ORTHO05D006233 1.7e-08 62.0 39 71.8
Gorai.011G076700 Gossypium raimondii HOM05D003716 ORTHO05D006233 1.7e-08 62.0 39 71.8
Psat7g065960 Pisum sativum HOM05D003716 ORTHO05D006233 1.7e-08 62.0 32 90.6
SHI08175 Sapria himalayana HOM05D003716 ORTHO05D006233 2.2e-08 61.6 35 82.9
Gorai.005G063000 Gossypium raimondii HOM05D003716 ORTHO05D006233 2.9e-08 61.2 36 80.6
SEGI_09146 Sequoiadendron giganteum HOM05D003716 ORTHO05D006233 3.8e-08 60.8 36 80.6
SEGI_10578 Sequoiadendron giganteum HOM05D003716 ORTHO05D006233 5.0e-08 60.5 38 76.3
Medtr1g040077 Medicago truncatula HOM05D000041 ORTHO05D000061 6.5e-08 60.1 29 100.0
Gohir.D10G071224 Gossypium hirsutum HOM05D003716 ORTHO05D006233 8.5e-08 59.7 39 69.2
arahy.Tifrunner.gnm1.ann1.IES0YP Arachis hypogaea HOM05D000833 ORTHO05D000969 2.7e-06 54.7 34 79.4
Gohir.D10G071256 Gossypium hirsutum HOM05D003716 ORTHO05D006233 6.1e-06 53.5 27 88.9


User provided reference genes

Program Settings