Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g038390 Medicago truncatula HOM05D006673 ORTHO05D008458 8.6e-72 273.5 131 100.0
Psat6g087440 Pisum sativum HOM05D006673 ORTHO05D008458 1.0e-32 143.7 110 69.1
TPR.G11866 Trifolium pratense HOM05D006673 ORTHO05D008458 2.1e-30 136.0 136 59.6
arahy.Tifrunner.gnm1.ann1.P1HIL5 Arachis hypogaea HOM05D006673 ORTHO05D008458 1.9e-26 122.9 134 55.2
Ca_18201_v3 Cicer arietinum L. HOM05D006673 ORTHO05D008458 3.2e-26 122.1 133 55.6
Glyma.08G091700 Glycine max HOM05D006673 ORTHO05D008458 5.5e-26 121.3 138 52.9
VMungo0251G3148 Vigna mungo HOM05D006673 ORTHO05D008458 2.7e-25 119.0 135 51.1
Phvul.002G185500 Phaseolus vulgaris HOM05D006673 ORTHO05D008458 6.0e-25 117.9 133 51.9
CARHR110080 Cardamine hirsuta HOM05D006673 ORTHO05D008458 6.7e-24 114.4 132 53.0
TWI36G0954 Tripterygium wilfordii HOM05D006673 ORTHO05D008458 1.9e-23 112.8 135 47.4
Lalb_Chr13g0293391 Lupinus albus HOM05D006673 ORTHO05D008458 3.3e-23 112.1 135 53.3
Ciclev10028653m.g Citrus clementina HOM05D006673 ORTHO05D008458 4.3e-23 111.7 132 50.8
AT2G19640 Arabidopsis thaliana HOM05D006673 ORTHO05D008458 8.1e-22 107.5 138 48.6
Carub.0003s3394 Capsella rubella HOM05D006673 ORTHO05D008458 5.3e-21 104.8 138 47.8
CiPaw.05G097000 Carya illinoinensis HOM05D006673 ORTHO05D008458 6.9e-21 104.4 136 46.3
Lj4g0022593 Lotus japonicus HOM05D006673 ORTHO05D008458 9.0e-21 104.0 88 62.5
Dinv29754 Davidia involucrata HOM05D006673 ORTHO05D008458 1.2e-20 103.6 130 46.9
Hund17075 Selenicereus undatus HOM05D006673 ORTHO05D008458 2.0e-20 102.8 130 46.9
AL3G48590 Arabidopsis lyrata HOM05D006673 ORTHO05D008458 2.6e-20 102.4 138 47.8
Rhsim01G0183300 Rhododendron simsii HOM05D006673 ORTHO05D008458 2.6e-20 102.4 134 48.5
Lsat_1_v5_gn_3_33341 Lactuca sativa HOM05D006673 ORTHO05D008458 1.3e-19 100.1 142 47.2
BcaC04g22837 Brassica carinata HOM05D006673 ORTHO05D008458 2.2e-19 99.4 98 56.1
BolC9t54380H Brassica oleracea HOM05D006673 ORTHO05D008458 2.2e-19 99.4 98 56.1
Sabra01G0050400 Salix brachista HOM05D006673 ORTHO05D008458 2.2e-19 99.4 132 45.5
Sp3g33010 Schrenkiella parvula HOM05D006673 ORTHO05D008458 2.2e-19 99.4 96 57.3
Duzib151G0613 Durio zibethinus HOM05D006673 ORTHO05D008458 2.9e-19 99.0 138 44.2
Haze_12539 Corylus avellana HOM05D006673 ORTHO05D008458 3.8e-19 98.6 96 53.1
Eucgr.J01690 Eucalyptus grandis HOM05D006673 ORTHO05D008458 3.8e-19 98.6 108 49.1
Eucgr.J01694 Eucalyptus grandis HOM05D006673 ORTHO05D008458 3.8e-19 98.6 98 53.1
Potri.001G071700 Populus trichocarpa HOM05D006673 ORTHO05D008458 3.8e-19 98.6 133 45.1
CARHR237330 Cardamine hirsuta HOM05D006673 ORTHO05D008458 6.5e-19 97.8 137 46.0
DCAR_030439 Daucus carota HOM05D006673 ORTHO05D008458 6.5e-19 97.8 137 46.0
C09p14800 Brassica napus HOM05D006673 ORTHO05D008458 8.4e-19 97.4 130 46.2
Manes.10G153800 Manihot esculenta HOM05D006673 ORTHO05D008458 8.4e-19 97.4 129 47.3
Aa31LG8G16640 Aethionema arabicum HOM05D006673 ORTHO05D008458 1.1e-18 97.1 142 44.4
THA.LOC104820538 Tarenaya hassleriana HOM05D006673 ORTHO05D008458 1.1e-18 97.1 95 54.7
Cpa.g.sc38.24 Carica papaya HOM05D006673 ORTHO05D008458 1.4e-18 96.7 133 46.6
PGR119G0473 Punica granatum HOM05D006673 ORTHO05D008458 1.4e-18 96.7 133 45.1
QL02p002326 Quercus lobata HOM05D006673 ORTHO05D008458 1.4e-18 96.7 96 53.1
BraA09t36893Z Brassica rapa HOM05D006673 ORTHO05D008458 1.9e-18 96.3 94 55.3
Thhalv10002010m.g Eutrema salsugineum HOM05D006673 ORTHO05D008458 1.9e-18 96.3 96 55.2
Gohir.D09G235900 Gossypium hirsutum HOM05D006673 ORTHO05D008458 1.9e-18 96.3 135 44.4
Atru.chr12.1483 Acer truncatum HOM05D006673 ORTHO05D008458 3.2e-18 95.5 89 58.4
A09p12490 Brassica napus HOM05D006673 ORTHO05D008458 3.2e-18 95.5 106 53.8
HanXRQChr06g0175351 Helianthus annuus HOM05D006673 ORTHO05D008458 5.5e-18 94.7 104 49.0
GSVIVG01001133001 Vitis vinifera HOM05D006673 ORTHO05D008458 7.1e-18 94.4 106 51.9
Sc02g0002970 Simmondsia chinensis HOM05D006673 ORTHO05D008458 9.3e-18 94.0 133 44.4
MBI07_g11065_MAGBIO Magnolia biondii HOM05D006673 ORTHO05D008458 1.2e-17 93.6 126 41.3
Thecc.04G298100 Theobroma cacao HOM05D006673 ORTHO05D008458 1.6e-17 93.2 134 43.3
Gorai.006G259000 Gossypium raimondii HOM05D006673 ORTHO05D008458 2.1e-17 92.8 111 49.5
Prupe.1G210500 Prunus persica HOM05D006673 ORTHO05D008458 2.1e-17 92.8 100 53.0
Aqoxy5G02914 Aquilegia oxysepala HOM05D006673 ORTHO05D008458 3.5e-17 92.0 134 44.0
Gohir.A09G235100 Gossypium hirsutum HOM05D006673 ORTHO05D008458 3.5e-17 92.0 111 48.6
Hma1.2p1_0738F.1_g211070 Hydrangea macrophylla HOM05D006673 ORTHO05D008458 6.0e-17 91.3 95 52.6
MD13G1134900 Malus domestica HOM05D006673 ORTHO05D008458 6.0e-17 91.3 97 49.5
CSS0030693 Camellia sinensis var. sinensis HOM05D006673 ORTHO05D008458 7.9e-17 90.9 76 56.6
Ca_25111_v3 Cicer arietinum L. HOM05D006673 ORTHO05D008458 7.9e-17 90.9 93 50.5
MD16G1130700 Malus domestica HOM05D006673 ORTHO05D008458 7.9e-17 90.9 96 51.0
Ah.05g173360 Amaranthus hybridus HOM05D006673 ORTHO05D008458 1.0e-16 90.5 98 50.0
CDE02G2773 Ceratophyllum demersum HOM05D006673 ORTHO05D008458 1.3e-16 90.1 101 52.5
Nn4g22041 Nelumbo nucifera HOM05D006673 ORTHO05D008458 1.3e-16 90.1 136 43.4
SEGI_08209 Sequoiadendron giganteum HOM05D006673 ORTHO05D008458 1.3e-16 90.1 137 42.3
PGSC0003DMG400017176 Solanum tuberosum HOM05D006673 ORTHO05D008458 1.3e-16 90.1 109 47.7
Lj3P1076T29 Lonicera japonica HOM05D006673 ORTHO05D008458 1.8e-16 89.7 94 52.1
Nitab4.5_0000044g0230 Nicotiana tabacum HOM05D000052 ORTHO05D008458 2.3e-16 89.4 109 47.7
PSO675G2922 Papaver somniferum HOM05D006673 ORTHO05D008458 2.3e-16 89.4 137 41.6
Solyc09g090030.2 Solanum lycopersicum HOM05D006673 ORTHO05D008458 3.0e-16 89.0 107 47.7
Sopen09g032940 Solanum pennellii HOM05D006673 ORTHO05D008458 3.0e-16 89.0 107 47.7
HPP92_003450 Vanilla planifolia HOM05D006673 ORTHO05D008458 3.0e-16 89.0 132 40.2
CAN.G793.53 Capsicum annuum HOM05D006673 ORTHO05D008458 3.9e-16 88.6 99 49.5
Medtr5g027020 Medicago truncatula HOM05D006673 ORTHO05D008458 3.9e-16 88.6 77 55.8
RcHm_v2.0_Chr4g0428221 Rosa chinensis HOM05D006673 ORTHO05D008458 3.9e-16 88.6 104 50.0
EL10Ac1g00795 Beta vulgaris HOM05D006673 ORTHO05D008458 5.1e-16 88.2 130 41.5
unitig_744.g24339 Utricularia gibba HOM05D006673 ORTHO05D008458 5.1e-16 88.2 95 47.4
ECA246G2067 Erigeron canadensis HOM05D006673 ORTHO05D008458 6.7e-16 87.8 142 40.8
TAR371G1265 Trochodendron aralioides HOM05D006673 ORTHO05D008458 8.7e-16 87.4 128 43.0
Migut.I00849 Erythranthe guttata HOM05D006673 ORTHO05D008458 1.1e-15 87.0 96 51.0
SalBow2G2533 Salvia bowleyana HOM05D006673 ORTHO05D008458 3.3e-15 85.5 89 51.7
SGA_v2.0_scaffold37G14814 Striga asiatica HOM05D006673 ORTHO05D008458 3.3e-15 85.5 137 40.1
EL10Ac1g00801 Beta vulgaris HOM05D006673 ORTHO05D008458 4.3e-15 85.1 87 48.3
FvH4_4g22020 Fragaria vesca HOM05D006673 ORTHO05D008458 4.3e-15 85.1 140 41.4
TPR.G29135 Trifolium pratense HOM05D006673 ORTHO05D008458 4.3e-15 85.1 94 48.9
VMungo1215G0951 Vigna mungo HOM05D006673 ORTHO05D008458 4.3e-15 85.1 127 39.4
AUR62004124 Chenopodium quinoa HOM05D006673 ORTHO05D008458 9.6e-15 84.0 72 58.3
Cc03_g11070 Coffea canephora HOM05D006673 ORTHO05D008458 9.6e-15 84.0 102 49.0
FAN07G2695 Fragaria x ananassa HOM05D006673 ORTHO05D008458 9.6e-15 84.0 99 48.5
FAN12G2690 Fragaria x ananassa HOM05D006673 ORTHO05D008458 9.6e-15 84.0 112 46.4
Nitab4.5_0011884g0020 Nicotiana tabacum HOM05D006673 ORTHO05D000046 9.6e-15 84.0 140 38.6
Psat2g141640 Pisum sativum HOM05D006673 ORTHO05D008458 9.6e-15 84.0 93 48.4
TAR371G1163 Trochodendron aralioides HOM05D006673 ORTHO05D008458 9.6e-15 84.0 125 42.4
ATR0582G160 Amborella trichopoda HOM05D006673 ORTHO05D008458 1.6e-14 83.2 95 48.4
Lalb_Chr05g0215481 Lupinus albus HOM05D006673 ORTHO05D008458 4.8e-14 81.6 94 45.7
Os08g0205300 Oryza sativa ssp. japonica HOM05D006673 ORTHO05D008458 6.3e-14 81.3 90 43.3
SMO117G0166 Selaginella moellendorffii HOM05D006673 ORTHO05D008458 6.3e-14 81.3 74 52.7
AUR62013717 Chenopodium quinoa HOM05D006673 ORTHO05D008458 8.2e-14 80.9 64 59.4
Glyma.01G148700 Glycine max HOM05D006673 ORTHO05D008458 8.2e-14 80.9 94 44.7
arahy.Tifrunner.gnm1.ann1.HTSI62 Arachis hypogaea HOM05D006673 ORTHO05D008458 1.1e-13 80.5 93 46.2
arahy.Tifrunner.gnm1.ann1.ZW62G6 Arachis hypogaea HOM05D006673 ORTHO05D008458 1.1e-13 80.5 93 46.2
RcHm_v2.0_Chr4g0427831 Rosa chinensis HOM05D006673 ORTHO05D008458 1.1e-13 80.5 102 45.1
MSTRG.22700 Avicennia marina HOM05D006673 ORTHO05D008458 3.1e-13 79.0 136 36.0
Pp3c15_12800 Physcomitrium patens HOM05D006673 ORTHO05D008458 5.3e-13 78.2 87 44.8
Psat2g141600 Pisum sativum HOM05D006673 ORTHO05D008458 5.3e-13 78.2 95 46.3
Zm00001eb413710 Zea mays HOM05D006673 ORTHO05D008458 6.9e-13 77.8 110 40.9
AagrBONN_evm.TU.Sc2ySwM_368.2743 Anthoceros agrestis HOM05D006673 ORTHO05D008458 1.2e-12 77.0 96 44.8
CBR_g8931 Chara braunii HOM05D006673 ORTHO05D008458 4.2e-10 68.6 76 43.4
Actinidia30570 Actinidia chinensis HOM05D006673 ORTHO05D008458 6.1e-09 64.7 90 47.8
Actinidia22101 Actinidia chinensis HOM05D006673 ORTHO05D008458 7.9e-09 64.3 66 45.5
arahy.Tifrunner.gnm1.ann1.QI9TW4 Arachis hypogaea HOM05D006673 ORTHO05D008458 2.8e-06 55.8 49 59.2
COL.COLO4_34640 Corchorus olitorius HOM05D006673 ORTHO05D008458 2.8e-06 55.8 44 59.1


User provided reference genes

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