Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g037850 Medicago truncatula HOM05D006499 ORTHO05D007874 2.9e-90 335.1 157 100.0
Medtr1g038530 Medicago truncatula HOM05D006499 ORTHO05D007874 2.0e-27 126.3 114 60.5
Medtr1g037830 Medicago truncatula HOM05D006499 ORTHO05D007874 2.7e-27 125.9 94 68.1
TPR.G29797 Trifolium pratense HOM05D006499 ORTHO05D007874 2.2e-26 122.9 94 66.0
Ca_05122_v3 Cicer arietinum L. HOM05D006499 ORTHO05D007874 5.0e-26 121.7 96 65.6
Lalb_Chr04g0258971 Lupinus albus HOM05D006499 ORTHO05D007874 2.5e-25 119.4 93 64.5
QL03p017519 Quercus lobata HOM05D006499 ORTHO05D007874 6.1e-24 114.8 94 59.6
QL03p017736 Quercus lobata HOM05D006499 ORTHO05D007874 8.0e-24 114.4 94 59.6
Manes.15G079500 Manihot esculenta HOM05D006499 ORTHO05D007874 1.8e-23 113.2 94 57.4
vmacro04318 Vaccinium macrocarpon HOM05D006499 ORTHO05D007874 1.8e-23 113.2 92 59.8
RcHm_v2.0_Chr4g0446811 Rosa chinensis HOM05D006499 ORTHO05D007874 5.2e-23 111.7 99 57.6
Psat6g099520 Pisum sativum HOM05D006499 ORTHO05D007874 1.2e-22 110.5 115 55.7
Glyma.09G283200 Glycine max HOM05D006499 ORTHO05D007874 1.5e-22 110.2 120 49.2
Phvul.003G004400 Phaseolus vulgaris HOM05D006499 ORTHO05D007874 1.5e-22 110.2 93 60.2
Rhsim05G0006600 Rhododendron simsii HOM05D006499 ORTHO05D007874 1.5e-22 110.2 92 57.6
Lj6P712T24 Lonicera japonica HOM05D006499 ORTHO05D007874 2.0e-22 109.8 92 59.8
Lj6P717T75 Lonicera japonica HOM05D006499 ORTHO05D007874 2.0e-22 109.8 92 59.8
CiPaw.06G061000 Carya illinoinensis HOM05D006499 ORTHO05D007874 2.6e-22 109.4 91 60.4
arahy.Tifrunner.gnm1.ann1.U0P7JC Arachis hypogaea HOM05D000717 ORTHO05D000555 4.4e-22 108.6 117 52.1
AUR62032973 Chenopodium quinoa HOM05D006499 ORTHO05D007874 5.7e-22 108.2 92 59.8
Haze_11761 Corylus avellana HOM05D006499 ORTHO05D007874 5.7e-22 108.2 94 55.3
Lj2g0027544 Lotus japonicus HOM05D006499 ORTHO05D007874 7.5e-22 107.8 106 56.6
MSTRG.12232 Avicennia marina HOM05D006499 ORTHO05D007874 9.8e-22 107.5 92 57.6
Actinidia13714 Actinidia chinensis HOM05D006499 ORTHO05D007874 1.3e-21 107.1 93 58.1
Ciclev10032745m.g Citrus clementina HOM05D006499 ORTHO05D007874 1.3e-21 107.1 154 42.2
CANSAT01G2706 Cannabis sativa HOM05D006499 ORTHO05D007874 1.7e-21 106.7 94 55.3
Prupe.1G348500 Prunus persica HOM05D006499 ORTHO05D007874 1.7e-21 106.7 98 54.1
Cfa008745 Carpinus fangiana HOM05D006499 ORTHO05D007874 2.2e-21 106.3 94 54.3
ECA236G1709 Erigeron canadensis HOM05D006499 ORTHO05D007874 2.2e-21 106.3 96 56.2
unitig_578.g16567 Utricularia gibba HOM05D006499 ORTHO05D007874 2.2e-21 106.3 94 55.3
CSS0024171 Camellia sinensis var. sinensis HOM05D006499 ORTHO05D007874 2.8e-21 105.9 90 58.9
DCAR_026894 Daucus carota HOM05D006499 ORTHO05D007874 2.8e-21 105.9 93 58.1
Nn4g24968 Nelumbo nucifera HOM05D006499 ORTHO05D007874 4.8e-21 105.1 90 60.0
Potri.003G003300 Populus trichocarpa HOM05D006499 ORTHO05D007874 4.8e-21 105.1 91 58.2
Sed0001124 Sechium edule HOM05D006499 ORTHO05D007874 4.8e-21 105.1 91 56.0
Thecc.02G158700 Theobroma cacao HOM05D006499 ORTHO05D007874 4.8e-21 105.1 91 58.2
Cc02_g20760 Coffea canephora HOM05D006499 ORTHO05D007874 6.3e-21 104.8 93 61.3
MD16G1003500 Malus domestica HOM05D006499 ORTHO05D007874 6.3e-21 104.8 105 51.4
AUR62017708 Chenopodium quinoa HOM05D006499 ORTHO05D007874 8.3e-21 104.4 144 42.4
FAN07G1092 Fragaria x ananassa HOM05D006499 ORTHO05D007874 8.3e-21 104.4 92 55.4
Os04g0525800 Oryza sativa ssp. japonica HOM05D006499 ORTHO05D007874 8.3e-21 104.4 92 57.6
QL04p029592 Quercus lobata HOM05D006499 ORTHO05D007874 1.1e-20 104.0 59 79.7
QL05p044270 Quercus lobata HOM05D000125 ORTHO05D007874 1.1e-20 104.0 59 79.7
Zm00001eb076800 Zea mays HOM05D006499 ORTHO05D007874 1.4e-20 103.6 93 55.9
EL10Ac9g22960 Beta vulgaris HOM05D006499 ORTHO05D007874 1.8e-20 103.2 118 45.8
SGA_v2.0_scaffold49G18416 Striga asiatica HOM05D006499 ORTHO05D007874 3.1e-20 102.4 92 54.3
HPP92_005057 Vanilla planifolia HOM05D006499 ORTHO05D007874 3.1e-20 102.4 113 50.4
Aa31LG11G2680 Aethionema arabicum HOM05D006499 ORTHO05D007874 5.4e-20 101.7 93 53.8
Cpa.g.sc92.93 Carica papaya HOM05D006499 ORTHO05D007874 5.4e-20 101.7 93 53.8
COL.COLO4_33044 Corchorus olitorius HOM05D006499 ORTHO05D007874 9.1e-20 100.9 91 53.8
Lsat_1_v5_gn_8_80081 Lactuca sativa HOM05D006499 ORTHO05D007874 9.1e-20 100.9 93 53.8
Nitab4.5_0000069g0350 Nicotiana tabacum HOM05D006499 ORTHO05D007874 1.2e-19 100.5 92 54.3
Nitab4.5_0004301g0030 Nicotiana tabacum HOM05D006499 ORTHO05D007874 1.2e-19 100.5 92 52.2
Oeu012342.1 Olea europaea HOM05D006499 ORTHO05D007874 1.2e-19 100.5 92 53.3
Aqoxy3G00285 Aquilegia oxysepala HOM05D006499 ORTHO05D007874 1.6e-19 100.1 91 52.7
AT5G23230 Arabidopsis thaliana HOM05D006499 ORTHO05D007874 2.0e-19 99.8 93 55.9
SEGI_40434 Sequoiadendron giganteum HOM05D006499 ORTHO05D007874 2.0e-19 99.8 99 50.5
Sopen01g003460 Solanum pennellii HOM05D006499 ORTHO05D007874 2.0e-19 99.8 92 53.3
THA.LOC104800852 Tarenaya hassleriana HOM05D006499 ORTHO05D007874 2.0e-19 99.8 91 52.7
FAN12G4256 Fragaria x ananassa HOM05D006499 ORTHO05D007874 2.7e-19 99.4 94 56.4
Gohir.D02G188400 Gossypium hirsutum HOM05D006499 ORTHO05D007874 2.7e-19 99.4 93 52.7
Gorai.005G211100 Gossypium raimondii HOM05D006499 ORTHO05D007874 2.7e-19 99.4 93 52.7
PGSC0003DMG400016411 Solanum tuberosum HOM05D006499 ORTHO05D007874 2.7e-19 99.4 92 52.2
Peaxi162Scf00021g01915 Petunia axillaris HOM05D006499 ORTHO05D007874 3.5e-19 99.0 92 52.2
Gohir.A03G165200 Gossypium hirsutum HOM05D006499 ORTHO05D007874 4.5e-19 98.6 93 52.7
Solyc01g007920.2 Solanum lycopersicum HOM05D006499 ORTHO05D007874 4.5e-19 98.6 92 52.2
ClCG02G014040 Citrullus lanatus HOM05D006499 ORTHO05D007874 5.9e-19 98.2 114 45.6
MELO3C011747.2 Cucumis melo HOM05D000045 ORTHO05D007874 5.9e-19 98.2 112 47.3
AT5G23220 Arabidopsis thaliana HOM05D006499 ORTHO05D007874 7.7e-19 97.8 118 44.9
CARHR190310 Cardamine hirsuta HOM05D006499 ORTHO05D007874 7.7e-19 97.8 96 51.0
CsaV3_5G006120 Cucumis sativus L. HOM05D000045 ORTHO05D007874 7.7e-19 97.8 89 52.8
Thhalv10005281m.g Eutrema salsugineum HOM05D006499 ORTHO05D007874 1.0e-18 97.4 93 52.7
Lalb_Chr10g0094911 Lupinus albus HOM05D006499 ORTHO05D007874 1.0e-18 97.4 91 56.0
A02p41090 Brassica napus HOM05D006499 ORTHO05D007874 1.3e-18 97.1 117 44.4
BraA02t09053Z Brassica rapa HOM05D006499 ORTHO05D007874 1.3e-18 97.1 118 44.1
CAN.G2.1 Capsicum annuum HOM05D006499 ORTHO05D007874 1.3e-18 97.1 58 72.4
COL.COLO4_06169 Corchorus olitorius HOM05D006499 ORTHO05D007874 1.3e-18 97.1 93 52.7
Migut.H01291 Erythranthe guttata HOM05D006499 ORTHO05D007874 1.3e-18 97.1 92 52.2
AL6G34450 Arabidopsis lyrata HOM05D006499 ORTHO05D007874 1.7e-18 96.7 154 40.3
BcaC03g18032 Brassica carinata HOM05D006499 ORTHO05D007874 2.3e-18 96.3 117 44.4
Duzib132G0016 Durio zibethinus HOM05D006499 ORTHO05D007874 2.9e-18 95.9 91 54.9
Duzib132G0405 Durio zibethinus HOM05D006499 ORTHO05D007874 2.9e-18 95.9 93 52.7
SHI02178 Sapria himalayana HOM05D006499 ORTHO05D007874 2.9e-18 95.9 59 72.9
C02p60950 Brassica napus HOM05D006499 ORTHO05D007874 3.8e-18 95.5 117 44.4
BolC2t12145H Brassica oleracea HOM05D006499 ORTHO05D007874 3.8e-18 95.5 117 44.4
Carub.0006s2100 Capsella rubella HOM05D006499 ORTHO05D007874 3.8e-18 95.5 93 50.5
TAR622G1217 Trochodendron aralioides HOM05D006499 ORTHO05D007874 3.8e-18 95.5 91 53.8
GSVIVG01026240001 Vitis vinifera HOM05D006499 ORTHO05D007874 3.8e-18 95.5 59 71.2
AagrBONN_evm.TU.Sc2ySwM_344.3677 Anthoceros agrestis HOM05D006499 ORTHO05D007874 5.0e-18 95.1 59 72.9
BcaB07g29862 Brassica carinata HOM05D006499 ORTHO05D007874 1.1e-17 94.0 91 51.6
MBI06_g20294_MAGBIO Magnolia biondii HOM05D006499 ORTHO05D007874 1.9e-17 93.2 114 43.0
Sp2g23920 Schrenkiella parvula HOM05D006499 ORTHO05D007874 1.9e-17 93.2 91 50.5
ATR0618G206 Amborella trichopoda HOM05D006499 ORTHO05D007874 4.2e-17 92.0 58 67.2
SMO116G0488 Selaginella moellendorffii HOM05D006499 ORTHO05D007874 4.2e-17 92.0 93 49.5
arahy.Tifrunner.gnm1.ann1.BULB93 Arachis hypogaea HOM05D006499 ORTHO05D007874 1.8e-15 86.7 103 48.5
CBR_g16977 Chara braunii HOM05D006499 ORTHO05D007874 3.0e-15 85.9 127 39.4
Pp3c12_9010 Physcomitrium patens HOM05D006499 ORTHO05D007874 2.6e-14 82.8 55 67.3
Mapoly0180s0008 Marchantia polymorpha HOM05D006499 ORTHO05D007874 2.4e-12 76.3 56 57.1
TAR622G0494 Trochodendron aralioides HOM05D006499 ORTHO05D007874 2.4e-12 76.3 92 45.7
arahy.Tifrunner.gnm1.ann1.YHJY2A Arachis hypogaea HOM05D006499 ORTHO05D007874 3.1e-12 75.9 81 50.6
PGR044G1944 Punica granatum HOM05D006499 ORTHO05D007874 1.5e-06 57.0 48 58.3


User provided reference genes

Program Settings