Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g037140 Medicago truncatula HOM05D011098 ORTHO05D000159 1.9e-65 252.3 124 100.0
TPR.G8248 Trifolium pratense HOM05D000170 ORTHO05D000159 1.2e-17 93.6 65 72.3
Medtr1g037040 Medicago truncatula HOM05D000170 ORTHO05D000159 1.5e-17 93.2 58 75.9
Medtr1g036510 Medicago truncatula HOM05D000170 ORTHO05D000159 1.7e-16 89.7 65 67.7
Medtr3g117130 Medicago truncatula HOM05D011098 ORTHO05D001923 1.7e-16 89.7 46 91.3
Ca_26892_v3 Cicer arietinum L. HOM05D000170 ORTHO05D000159 1.4e-15 86.7 65 64.6
Medtr1g036460 Medicago truncatula HOM05D000170 ORTHO05D000159 3.1e-15 85.5 65 63.1
Ca_26893_v3 Cicer arietinum L. HOM05D000170 ORTHO05D000159 7.0e-15 84.3 63 63.5
TPR.G8247 Trifolium pratense HOM05D000170 ORTHO05D000159 9.1e-15 84.0 65 63.1
Medtr1g036490 Medicago truncatula HOM05D000170 ORTHO05D000159 4.5e-14 81.6 65 60.0
Medtr1g050220 Medicago truncatula HOM05D000170 ORTHO05D000159 5.9e-14 81.3 62 64.5
Lj6g0021195 Lotus japonicus HOM05D000170 ORTHO05D000159 2.2e-13 79.3 65 61.5
Ca_26720_v3 Cicer arietinum L. HOM05D000170 ORTHO05D000159 1.9e-12 76.3 63 57.1
Ca_29780_v3 Cicer arietinum L. HOM05D000170 ORTHO05D000159 1.9e-12 76.3 63 57.1
Lj3g0001306 Lotus japonicus HOM05D000170 ORTHO05D000159 2.5e-12 75.9 65 60.0
Lj3g0005376 Lotus japonicus HOM05D000170 ORTHO05D000159 2.5e-12 75.9 65 60.0
Lj3g0014911 Lotus japonicus HOM05D000170 ORTHO05D000159 2.5e-12 75.9 65 60.0
Lj2g0007736 Lotus japonicus HOM05D000170 ORTHO05D000159 5.5e-12 74.7 65 55.4
Psat6g098840 Pisum sativum HOM05D000170 ORTHO05D000159 2.7e-11 72.4 51 66.7
Glyma.09G281800 Glycine max HOM05D000170 ORTHO05D000159 4.7e-11 71.6 65 50.8
arahy.Tifrunner.gnm1.ann1.XZJ3XS Arachis hypogaea HOM05D000170 ORTHO05D000159 3.0e-10 68.9 63 49.2
Phvul.003G006100 Phaseolus vulgaris HOM05D000170 ORTHO05D000159 4.0e-10 68.6 70 48.6
Phvul.003G006000 Phaseolus vulgaris HOM05D000170 ORTHO05D000159 8.8e-10 67.4 70 47.1
Glyma.09G281900 Glycine max HOM05D000170 ORTHO05D000159 1.2e-09 67.0 63 47.6
Lj2g0013648 Lotus japonicus HOM05D000170 ORTHO05D000159 2.6e-09 65.9 65 49.2
Glyma.20G003500 Glycine max HOM05D000170 ORTHO05D000159 3.4e-09 65.5 63 47.6
VMungo0251G1360 Vigna mungo HOM05D000170 ORTHO05D000159 3.4e-09 65.5 63 50.8
Lj2g0022441 Lotus japonicus HOM05D000170 ORTHO05D000159 9.8e-09 63.9 63 46.0
Lj2g0025623 Lotus japonicus HOM05D000170 ORTHO05D000159 1.7e-08 63.2 63 49.2
QL10p049011 Quercus lobata HOM05D000170 ORTHO05D000159 1.8e-07 59.7 64 43.8
Cfa002875 Carpinus fangiana HOM05D000170 ORTHO05D000159 4.1e-07 58.5 72 41.7
QL10p049768 Quercus lobata HOM05D000170 ORTHO05D000159 5.4e-07 58.2 67 40.3
QL10p049908 Quercus lobata HOM05D000170 ORTHO05D000159 9.2e-07 57.4 67 40.3
Lj2g0022818 Lotus japonicus HOM05D000170 ORTHO05D000159 1.6e-06 56.6 60 45.0
Cfa019865 Carpinus fangiana HOM05D000170 ORTHO05D000159 2.7e-06 55.8 68 44.1
Haze_17683 Corylus avellana HOM05D000170 ORTHO05D000159 2.7e-06 55.8 67 41.8
Medtr1g096310 Medicago truncatula HOM05D000170 ORTHO05D000159 4.5e-06 55.1 63 39.7


User provided reference genes

Program Settings