Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g034430 Medicago truncatula HOM05D000147 ORTHO05D004093 2.2e-105 385.6 184 100.0
Medtr1g088650 Medicago truncatula HOM05D000147 ORTHO05D004093 4.1e-27 125.6 107 54.2
Medtr8g031800 Medicago truncatula HOM05D000147 ORTHO05D004093 5.0e-25 118.6 103 56.3
Medtr5g085210 Medicago truncatula HOM05D000147 ORTHO05D004093 1.1e-24 117.5 106 48.1
TPR.G26136 Trifolium pratense HOM05D000147 ORTHO05D001254 9.4e-24 114.4 167 38.3
Medtr2g059470 Medicago truncatula HOM05D000147 ORTHO05D004093 1.2e-23 114.0 82 57.3
Medtr6g016265 Medicago truncatula HOM05D000147 ORTHO05D004093 1.4e-22 110.5 107 47.7
Medtr3g116210 Medicago truncatula HOM05D000147 ORTHO05D004093 8.8e-22 107.8 147 37.4
Medtr7g013520 Medicago truncatula HOM05D000147 ORTHO05D004093 2.0e-21 106.7 161 39.1
Medtr8g099580 Medicago truncatula HOM05D000147 ORTHO05D004093 2.0e-21 106.7 187 33.7
Medtr4g008270 Medicago truncatula HOM05D000147 ORTHO05D004093 2.5e-21 106.3 79 60.8
Medtr6g453270 Medicago truncatula HOM05D000147 ORTHO05D004093 3.3e-21 105.9 149 38.3
Medtr8g022750 Medicago truncatula HOM05D000147 ORTHO05D004093 4.3e-21 105.5 189 35.4
TPR.G18407 Trifolium pratense HOM05D000147 ORTHO05D004093 5.7e-21 105.1 99 46.5
TPR.G397 Trifolium pratense HOM05D000147 ORTHO05D004093 1.3e-20 104.0 105 47.6
TPR.G29999 Trifolium pratense HOM05D000147 ORTHO05D004093 3.7e-20 102.4 151 37.1
Psat5g258880 Pisum sativum HOM05D000147 ORTHO05D004093 4.8e-20 102.1 150 36.7
Medtr1g099430 Medicago truncatula HOM05D000147 ORTHO05D004093 8.2e-20 101.3 86 54.7
TPR.G12197 Trifolium pratense HOM05D000147 ORTHO05D004093 1.4e-19 100.5 150 36.0
Medtr7g006470 Medicago truncatula HOM05D000147 ORTHO05D004093 1.8e-19 100.1 82 52.4
Medtr1g069475 Medicago truncatula HOM05D000147 ORTHO05D004093 3.1e-19 99.4 108 43.5
Medtr6g089560 Medicago truncatula HOM05D000147 ORTHO05D004093 3.1e-19 99.4 155 35.5
Medtr5g049680 Medicago truncatula HOM05D000147 ORTHO05D004093 6.9e-19 98.2 89 47.2
Medtr1g017840 Medicago truncatula HOM05D000147 ORTHO05D004093 2.0e-18 96.7 156 35.9
Medtr5g075610 Medicago truncatula HOM05D000147 ORTHO05D004093 2.0e-18 96.7 80 56.2
Medtr4g029360 Medicago truncatula HOM05D000147 ORTHO05D004093 2.6e-18 96.3 173 35.8
Medtr0002s1220 Medicago truncatula HOM05D000147 ORTHO05D004093 4.5e-18 95.5 112 40.2
Medtr5g083200 Medicago truncatula HOM05D000147 ORTHO05D004093 4.5e-18 95.5 112 40.2
Medtr8g038340 Medicago truncatula HOM05D000147 ORTHO05D004093 5.9e-18 95.1 92 48.9
Medtr0015s0120 Medicago truncatula HOM05D000147 ORTHO05D004093 1.0e-17 94.4 157 33.1
TPR.G15289 Trifolium pratense HOM05D000147 ORTHO05D004093 1.3e-17 94.0 98 44.9
Medtr1g070820 Medicago truncatula HOM05D000147 ORTHO05D004093 1.7e-17 93.6 112 39.3
Medtr3g111390 Medicago truncatula HOM05D000147 ORTHO05D004093 1.7e-17 93.6 112 39.3
Medtr1g045340 Medicago truncatula HOM05D000147 ORTHO05D004093 2.9e-17 92.8 105 42.9
Medtr4g094370 Medicago truncatula HOM05D000147 ORTHO05D004093 8.5e-17 91.3 72 58.3
Medtr5g036320 Medicago truncatula HOM05D000147 ORTHO05D004093 8.5e-17 91.3 117 41.9
Medtr2g027020 Medicago truncatula HOM05D000147 ORTHO05D004093 1.9e-16 90.1 101 45.5
Medtr1g081930 Medicago truncatula HOM05D000147 ORTHO05D004093 3.2e-16 89.4 112 42.0
Medtr2g047100 Medicago truncatula HOM05D000147 ORTHO05D004093 1.2e-15 87.4 100 44.0
Medtr5g037920 Medicago truncatula HOM05D000147 ORTHO05D004093 1.2e-15 87.4 97 43.3
Medtr7g063280 Medicago truncatula HOM05D000147 ORTHO05D004093 1.2e-15 87.4 180 26.7
Medtr1g018300 Medicago truncatula HOM05D000147 ORTHO05D004093 1.6e-15 87.0 149 33.6
Medtr8g031080 Medicago truncatula HOM05D000147 ORTHO05D004093 1.6e-15 87.0 112 44.6
Medtr0093s0070 Medicago truncatula HOM05D000147 ORTHO05D004093 2.7e-15 86.3 168 31.0
Medtr1g074090 Medicago truncatula HOM05D000147 ORTHO05D004093 2.7e-15 86.3 105 40.0
Medtr1g050488 Medicago truncatula HOM05D000147 ORTHO05D004093 7.9e-15 84.7 97 45.4
Medtr8g098925 Medicago truncatula HOM05D000147 ORTHO05D004093 7.9e-15 84.7 156 32.7
TPR.G14874 Trifolium pratense HOM05D000147 ORTHO05D004093 2.3e-14 83.2 167 32.3
Medtr8g028785 Medicago truncatula HOM05D000147 ORTHO05D004093 5.1e-14 82.0 150 36.0
Medtr2g451430 Medicago truncatula HOM05D000147 ORTHO05D004093 6.7e-14 81.6 66 51.5
Medtr8g036780 Medicago truncatula HOM05D000147 ORTHO05D004093 6.7e-14 81.6 83 41.0
Medtr8g079540 Medicago truncatula HOM05D000147 ORTHO05D004093 6.7e-14 81.6 115 34.8
Medtr1g074240 Medicago truncatula HOM05D000147 ORTHO05D004093 1.1e-13 80.9 61 52.5
Medtr1g087480 Medicago truncatula HOM05D000147 ORTHO05D004093 1.1e-13 80.9 117 35.9
Medtr4g046027 Medicago truncatula HOM05D000147 ORTHO05D004093 2.0e-13 80.1 63 55.6
Medtr5g034450 Medicago truncatula HOM05D000147 ORTHO05D004093 2.0e-13 80.1 78 46.2
Medtr3g462490 Medicago truncatula HOM05D000327 ORTHO05D000218 1.3e-12 77.4 66 50.0
Psat6g221120 Pisum sativum HOM05D000147 ORTHO05D004093 3.7e-12 75.9 109 40.4
Medtr1g054905 Medicago truncatula HOM05D000147 ORTHO05D004093 4.8e-12 75.5 134 31.3
Medtr6g046670 Medicago truncatula HOM05D000147 ORTHO05D004093 4.8e-12 75.5 122 33.6
Medtr4g035890 Medicago truncatula HOM05D000147 ORTHO05D004093 1.1e-11 74.3 116 33.6
Medtr4g094272 Medicago truncatula HOM05D000147 ORTHO05D004093 3.1e-11 72.8 68 50.0
Nn1g02030 Nelumbo nucifera HOM05D000003 ORTHO05D004093 9.1e-11 71.2 143 31.5
Psat5g003480 Pisum sativum HOM05D000147 ORTHO05D004093 9.1e-11 71.2 110 36.4
Medtr7g053400 Medicago truncatula HOM05D000147 ORTHO05D004093 1.2e-10 70.9 142 31.0
CANSAT21G1065 Cannabis sativa HOM05D000003 ORTHO05D000167 1.6e-10 70.5 181 29.8
Medtr2g017550 Medicago truncatula HOM05D000147 ORTHO05D004093 1.6e-10 70.5 74 43.2
Medtr8g039080 Medicago truncatula HOM05D000147 ORTHO05D004093 1.6e-10 70.5 99 40.4
Medtr8g059135 Medicago truncatula HOM05D000147 ORTHO05D004093 3.5e-10 69.3 83 33.7
Medtr1g022215 Medicago truncatula HOM05D000147 ORTHO05D004093 1.0e-09 67.8 67 44.8
Medtr6g016355 Medicago truncatula HOM05D000147 ORTHO05D004093 1.0e-09 67.8 78 37.2
Medtr2g102247 Medicago truncatula HOM05D000147 ORTHO05D004093 1.3e-09 67.4 100 35.0
Medtr6g033225 Medicago truncatula HOM05D000147 ORTHO05D004093 2.9e-09 66.2 78 42.3
Manes.10G073737 Manihot esculenta HOM05D000003 ORTHO05D000004 6.5e-09 65.1 174 27.6
Medtr7g078610 Medicago truncatula HOM05D000147 ORTHO05D004093 8.5e-09 64.7 59 49.2
Medtr5g068115 Medicago truncatula HOM05D000147 ORTHO05D004093 1.1e-08 64.3 62 41.9
Medtr1g045560 Medicago truncatula HOM05D000147 ORTHO05D004093 1.5e-08 63.9 58 39.7
Medtr2g011830 Medicago truncatula HOM05D000147 ORTHO05D004093 1.5e-08 63.9 65 43.1
TPR.G18397 Trifolium pratense HOM05D000147 ORTHO05D004093 1.9e-08 63.5 64 45.3
Medtr7g006380 Medicago truncatula HOM05D000147 ORTHO05D004093 2.5e-08 63.2 57 47.4
CANSAT64G1939 Cannabis sativa HOM05D000003 ORTHO05D000004 3.2e-08 62.8 173 25.4
TPR.G11037 Trifolium pratense HOM05D000147 ORTHO05D004093 3.2e-08 62.8 54 51.9
CANSAT25G2810 Cannabis sativa HOM05D000003 ORTHO05D000167 7.2e-08 61.6 108 30.6
Medtr1g062840 Medicago truncatula HOM05D000147 ORTHO05D004093 7.2e-08 61.6 57 50.9
CANSAT35G0331 Cannabis sativa HOM05D000003 ORTHO05D000004 9.4e-08 61.2 173 26.0
Medtr8g088220 Medicago truncatula HOM05D000147 ORTHO05D004093 9.4e-08 61.2 76 36.8
Medtr1g109000 Medicago truncatula HOM05D000147 ORTHO05D004093 1.2e-07 60.8 82 39.0
CANSAT56G1507 Cannabis sativa HOM05D000003 ORTHO05D000167 1.6e-07 60.5 147 27.9
CANSAT78G1869 Cannabis sativa HOM05D000003 ORTHO05D000167 1.6e-07 60.5 112 29.5
Medtr6g075220 Medicago truncatula HOM05D000147 ORTHO05D267569 2.7e-07 59.7 72 48.6
CANSAT11G1768 Cannabis sativa HOM05D000003 ORTHO05D000167 3.6e-07 59.3 127 28.3
CANSAT11G1818 Cannabis sativa HOM05D000003 ORTHO05D000004 3.6e-07 59.3 140 25.0
CANSAT64G1009 Cannabis sativa HOM05D000003 ORTHO05D000004 3.6e-07 59.3 112 29.5
Medtr2g438450 Medicago truncatula HOM05D000147 ORTHO05D004093 3.6e-07 59.3 78 38.5
Medtr8g037330 Medicago truncatula HOM05D015550 ORTHO05D014649 3.6e-07 59.3 198 25.8
Medtr8g045330 Medicago truncatula HOM05D000147 ORTHO05D004093 6.1e-07 58.5 92 32.6
CANSAT54G2704 Cannabis sativa HOM05D000003 ORTHO05D000167 8.0e-07 58.2 110 30.9
Medtr6g016135 Medicago truncatula HOM05D000147 ORTHO05D004093 8.0e-07 58.2 60 38.3
CANSAT56G1334 Cannabis sativa HOM05D000003 ORTHO05D000167 1.0e-06 57.8 111 25.2
CANSAT56G3299 Cannabis sativa HOM05D000003 ORTHO05D000167 1.0e-06 57.8 110 28.2
CANSAT56G1927 Cannabis sativa HOM05D000003 ORTHO05D000167 1.4e-06 57.4 110 28.2
TPR.G33654 Trifolium pratense HOM05D000147 ORTHO05D004093 1.4e-06 57.4 43 58.1
CANSAT01G1451 Cannabis sativa HOM05D000003 ORTHO05D000167 1.8e-06 57.0 110 29.1
CANSAT01G2358 Cannabis sativa HOM05D000003 ORTHO05D000167 1.8e-06 57.0 110 24.5
CANSAT80G2787 Cannabis sativa HOM05D000003 ORTHO05D000167 1.8e-06 57.0 108 25.9
Lj2P1109T58 Lonicera japonica HOM05D000003 ORTHO05D000167 2.3e-06 56.6 101 31.7
CANSAT11G2397 Cannabis sativa HOM05D000003 ORTHO05D000167 3.0e-06 56.2 202 25.2
Lju470C9T6 Lonicera japonica HOM05D000003 ORTHO05D000167 3.0e-06 56.2 151 26.5
CANSAT56G0579 Cannabis sativa HOM05D000003 ORTHO05D000167 4.0e-06 55.8 170 26.5
CANSAT78G2368 Cannabis sativa HOM05D000003 ORTHO05D000167 4.0e-06 55.8 110 29.1
Medtr3g060800 Medicago truncatula HOM05D000147 ORTHO05D004093 4.0e-06 55.8 42 59.5
RcHm_v2.0_Chr1g0328181 Rosa chinensis HOM05D000003 ORTHO05D000004 5.2e-06 55.5 124 29.0


User provided reference genes

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