Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g030640 Medicago truncatula HOM05D007719 ORTHO05D009782 3.6e-233 811.2 408 100.0
Psat0s3407g0080 Pisum sativum HOM05D007719 ORTHO05D009782 1.2e-212 743.0 406 92.9
TPR.G36961 Trifolium pratense HOM05D007719 ORTHO05D009782 8.5e-211 736.9 403 92.6
Ca_25710_v3 Cicer arietinum L. HOM05D007719 ORTHO05D009782 1.1e-202 709.9 411 88.3
Lalb_Chr17g0338681 Lupinus albus HOM05D007719 ORTHO05D009782 1.2e-196 689.9 396 86.9
Glyma.09G119300 Glycine max HOM05D007719 ORTHO05D009782 4.3e-194 681.4 411 82.7
Lj2g0007830 Lotus japonicus HOM05D007719 ORTHO05D009782 1.2e-193 679.9 373 88.5
VMungo1215G2618 Vigna mungo HOM05D007719 ORTHO05D009782 1.5e-191 672.9 402 83.6
Phvul.003G022800 Phaseolus vulgaris HOM05D007719 ORTHO05D009782 1.7e-190 669.5 399 83.2
arahy.Tifrunner.gnm1.ann1.Y8VIVB Arachis hypogaea HOM05D007719 ORTHO05D009782 4.9e-182 641.3 397 80.9
QL01p001957 Quercus lobata HOM05D007719 ORTHO05D009782 4.0e-176 621.7 384 79.7
Dinv05161 Davidia involucrata HOM05D007719 ORTHO05D009782 1.3e-174 616.7 381 79.0
TWI75G0056 Tripterygium wilfordii HOM05D007719 ORTHO05D009782 2.2e-174 615.9 377 79.8
Atru.chr11.428 Acer truncatum HOM05D007719 ORTHO05D009782 4.1e-173 611.7 388 77.6
CiPaw.05G248600 Carya illinoinensis HOM05D007719 ORTHO05D009782 5.4e-173 611.3 398 76.9
FAN12G3181 Fragaria x ananassa HOM05D007719 ORTHO05D009782 1.2e-172 610.1 396 77.0
FvH4_4g32280 Fragaria vesca HOM05D007719 ORTHO05D009782 2.7e-172 609.0 394 77.4
TAR629G1042 Trochodendron aralioides HOM05D007719 ORTHO05D009782 3.5e-172 608.6 375 79.5
Gohir.A12G150300 Gossypium hirsutum HOM05D007719 ORTHO05D009782 3.9e-171 605.1 390 76.2
Gorai.008G166400 Gossypium raimondii HOM05D007719 ORTHO05D009782 3.9e-171 605.1 390 75.9
COL.COLO4_20469 Corchorus olitorius HOM05D007719 ORTHO05D009782 8.6e-171 604.0 421 72.0
Potri.010G114100 Populus trichocarpa HOM05D007719 ORTHO05D009782 8.6e-171 604.0 365 81.4
MD16G1029600 Malus domestica HOM05D007719 ORTHO05D009782 1.5e-170 603.2 395 76.5
FAN07G1524 Fragaria x ananassa HOM05D007719 ORTHO05D009782 2.5e-170 602.4 363 80.7
CSS0046068 Camellia sinensis var. sinensis HOM05D007719 ORTHO05D009782 2.1e-169 599.4 380 76.6
arahy.Tifrunner.gnm1.ann1.L198GP Arachis hypogaea HOM05D007719 ORTHO05D009782 1.4e-168 596.7 397 76.8
ClCG01G006100 Citrullus lanatus HOM05D007719 ORTHO05D009782 3.1e-168 595.5 403 74.7
FAN22G2057 Fragaria x ananassa HOM05D007719 ORTHO05D009782 3.1e-168 595.5 393 75.3
vmacro10633 Vaccinium macrocarpon HOM05D007719 ORTHO05D009782 6.8e-168 594.3 380 77.1
EL10Ac3g06304 Beta vulgaris HOM05D007719 ORTHO05D009782 1.2e-167 593.6 394 74.9
Hund24987 Selenicereus undatus HOM05D007719 ORTHO05D009782 1.2e-167 593.6 373 78.8
Rhsim09G0099000 Rhododendron simsii HOM05D007719 ORTHO05D009782 4.4e-167 591.7 387 75.2
RcHm_v2.0_Chr4g0441071 Rosa chinensis HOM05D007719 ORTHO05D009782 1.3e-166 590.1 378 76.7
Sed0008286 Sechium edule HOM05D007719 ORTHO05D009782 1.3e-166 590.1 374 78.1
ECA234G0976 Erigeron canadensis HOM05D007719 ORTHO05D009782 2.2e-166 589.3 377 76.4
PGR119G0428 Punica granatum HOM05D007719 ORTHO05D009782 2.9e-166 589.0 379 77.6
Manes.15G114900 Manihot esculenta HOM05D007719 ORTHO05D009782 4.9e-166 588.2 356 80.3
Eucgr.G02196 Eucalyptus grandis HOM05D007719 ORTHO05D009782 1.4e-165 586.6 376 78.5
Sabra10G0084100 Salix brachista HOM05D007719 ORTHO05D009782 1.9e-165 586.3 433 68.1
Actinidia36679 Actinidia chinensis HOM05D007719 ORTHO05D009782 3.2e-165 585.5 374 75.9
CsaV3_5G028560 Cucumis sativus L. HOM05D007719 ORTHO05D009782 9.2e-165 583.9 389 74.8
FAN17G2178 Fragaria x ananassa HOM05D007719 ORTHO05D009782 1.2e-164 583.6 357 79.3
CAN.G1334.8 Capsicum annuum HOM05D007719 ORTHO05D009782 2.5e-162 575.9 376 76.3
AUR62002606 Chenopodium quinoa HOM05D007719 ORTHO05D009782 5.6e-162 574.7 370 75.9
Lsat_1_v5_gn_4_14941 Lactuca sativa HOM05D007719 ORTHO05D009782 5.6e-162 574.7 377 74.5
Sc11g0004120 Simmondsia chinensis HOM05D007719 ORTHO05D009782 2.8e-161 572.4 386 74.6
AUR62030024 Chenopodium quinoa HOM05D007719 ORTHO05D009782 1.4e-160 570.1 378 74.9
Sopen05g004110 Solanum pennellii HOM05D007719 ORTHO05D009782 2.4e-160 569.3 385 73.5
HanXRQChr17g0566951 Helianthus annuus HOM05D007719 ORTHO05D009782 2.0e-159 566.2 373 75.1
Solyc05g008270.3 Solanum lycopersicum HOM05D007719 ORTHO05D009782 4.4e-159 565.1 385 73.2
DCAR_030215 Daucus carota HOM05D007719 ORTHO05D009782 2.2e-158 562.8 356 76.7
MSTRG.23215 Avicennia marina HOM05D007719 ORTHO05D009782 3.8e-158 562.0 375 73.9
Cc11_g08840 Coffea canephora HOM05D007719 ORTHO05D009782 3.8e-158 562.0 394 71.3
Ah.07g204110 Amaranthus hybridus HOM05D007719 ORTHO05D009782 1.4e-157 560.1 387 72.6
PGSC0003DMG400030550 Solanum tuberosum HOM05D007719 ORTHO05D009782 2.1e-156 556.2 389 71.7
ATR0686G226 Amborella trichopoda HOM05D007719 ORTHO05D009782 3.5e-156 555.4 363 74.4
Os01g0127400 Oryza sativa ssp. japonica HOM05D007719 ORTHO05D009782 1.3e-155 553.5 386 71.5
Nitab4.5_0004776g0060 Nicotiana tabacum HOM05D007719 ORTHO05D009782 3.0e-155 552.4 350 77.4
Oeu034423.3 Olea europaea HOM05D007719 ORTHO05D009782 9.6e-154 547.4 391 70.6
Prupe.1G323300 Prunus persica HOM05D007719 ORTHO05D009782 1.2e-151 540.4 361 77.0
SEGI_18275 Sequoiadendron giganteum HOM05D007719 ORTHO05D009782 1.2e-151 540.4 355 74.6
SGA_v2.0_scaffold25G10737 Striga asiatica HOM05D007719 ORTHO05D009782 5.8e-151 538.1 414 68.8
HPP92_021852 Vanilla planifolia HOM05D007719 ORTHO05D009782 5.8e-151 538.1 391 67.8
SalBow5G1767 Salvia bowleyana HOM05D007719 ORTHO05D009782 2.9e-150 535.8 376 72.3
Migut.O00274 Erythranthe guttata HOM05D007719 ORTHO05D009782 2.7e-148 529.3 385 70.9
unitig_61.g26194 Utricularia gibba HOM05D007719 ORTHO05D009782 2.8e-145 519.2 362 71.8
Pp3c1_3200 Physcomitrium patens HOM05D007719 ORTHO05D009782 3.1e-144 515.8 352 71.3
Peaxi162Scf00205g00122 Petunia axillaris HOM05D007719 ORTHO05D009782 9.0e-144 514.2 375 70.1
Mapoly0070s0076 Marchantia polymorpha HOM05D007719 ORTHO05D009782 5.8e-143 511.5 350 69.1
MELO3C005317.2 Cucumis melo HOM05D007719 ORTHO05D009782 3.0e-139 499.2 401 65.1
SMO236G0033 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 2.5e-133 479.6 383 63.2
SMO236G0110 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 2.5e-133 479.6 383 63.2
GSVIVG01011772001 Vitis vinifera HOM05D007719 ORTHO05D009782 1.8e-131 473.4 356 70.5
Actinidia15254 Actinidia chinensis HOM05D007719 ORTHO05D009782 1.1e-130 470.7 375 65.1
CDE04G3405 Ceratophyllum demersum HOM05D007719 ORTHO05D009782 5.7e-130 468.4 399 63.7
Zm00001eb125300 Zea mays HOM05D007719 ORTHO05D009782 9.4e-125 451.1 396 60.4
Thecc.02G280000 Theobroma cacao HOM05D007719 ORTHO05D009782 2.2e-113 413.3 264 76.9
Cpa.g.sc65.124 Carica papaya HOM05D007719 ORTHO05D009782 1.7e-110 403.7 263 76.4
Gohir.D12G153900 Gossypium hirsutum HOM05D007719 ORTHO05D009782 1.7e-110 403.7 261 75.5
SMO187G0003 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 8.8e-107 391.3 383 54.3
Haze_11019 Corylus avellana HOM05D007719 ORTHO05D009782 6.3e-105 385.2 298 69.8
AagrBONN_evm.TU.Sc2ySwM_228.3777 Anthoceros agrestis HOM05D007719 ORTHO05D009782 9.4e-93 344.7 274 63.1
Cfa008596 Carpinus fangiana HOM05D007719 ORTHO05D009782 1.2e-92 344.4 251 72.1
SEGI_23314 Sequoiadendron giganteum HOM05D007719 ORTHO05D009782 7.0e-88 328.6 231 71.0
Nn4g24120 Nelumbo nucifera HOM05D007719 ORTHO05D009782 1.7e-81 307.4 174 83.3
CBR_g12440 Chara braunii HOM05D007719 ORTHO05D009782 7.0e-80 302.0 353 47.9
Duzib268G0649 Durio zibethinus HOM05D007719 ORTHO05D009782 4.7e-68 262.7 233 60.5
GSVIVG01011775001 Vitis vinifera HOM05D007719 ORTHO05D009782 8.6e-62 241.9 145 82.1
Cfa008597 Carpinus fangiana HOM05D007719 ORTHO05D009782 1.2e-47 194.9 136 70.6
Haze_11018 Corylus avellana HOM05D007719 ORTHO05D009782 2.7e-47 193.7 124 75.0
TPR.G29132 Trifolium pratense HOM05D007719 ORTHO05D009782 2.8e-12 77.4 77 58.4


User provided reference genes

Program Settings