Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g028610 Medicago truncatula HOM05D001384 ORTHO05D001215 1.1e-21 105.9 63 100.0
Lj1g0015216 Lotus japonicus HOM05D001384 ORTHO05D001215 2.2e-12 75.1 60 75.0
Psat6g039320 Pisum sativum HOM05D001384 ORTHO05D001215 2.2e-12 75.1 63 69.8
Lj1g0008485 Lotus japonicus HOM05D001384 ORTHO05D001215 6.3e-12 73.6 60 73.3
Medtr3g090830 Medicago truncatula HOM05D001384 ORTHO05D001215 4.1e-11 70.9 60 73.3
Lalb_Chr11g0066541 Lupinus albus HOM05D001384 ORTHO05D001215 6.9e-11 70.1 60 71.7
Glyma.14G161000 Glycine max HOM05D001384 ORTHO05D001215 2.0e-10 68.6 57 70.2
Lalb_Chr08g0240611 Lupinus albus HOM05D001384 ORTHO05D001215 5.9e-10 67.0 60 70.0
Glyma.13G041100 Glycine max HOM05D001384 ORTHO05D001215 1.3e-09 65.9 57 75.4
Glyma.06G125300 Glycine max HOM05D001384 ORTHO05D001215 1.7e-09 65.5 60 66.7
Phvul.001G079000 Phaseolus vulgaris HOM05D001384 ORTHO05D001215 2.2e-09 65.1 57 63.2
Glyma.04G238500 Glycine max HOM05D001384 ORTHO05D001215 5.0e-09 63.9 60 63.3
Psat5g079840 Pisum sativum HOM05D001384 ORTHO05D001215 6.5e-09 63.5 60 63.3
Lalb_Chr23g0271451 Lupinus albus HOM05D001384 ORTHO05D001215 1.9e-08 62.0 57 68.4
Aa31LG1G27700 Aethionema arabicum HOM05D001384 ORTHO05D001215 2.5e-08 61.6 59 59.3
Aa31LG10G15620 Aethionema arabicum HOM05D001384 ORTHO05D001215 3.2e-08 61.2 56 58.9
Phvul.009G137200 Phaseolus vulgaris HOM05D001384 ORTHO05D001215 5.5e-08 60.5 57 64.9
Gohir.D07G144700 Gossypium hirsutum HOM05D001384 ORTHO05D001215 9.4e-08 59.7 56 58.9
Gorai.008G252400 Gossypium raimondii HOM05D001384 ORTHO05D001215 9.4e-08 59.7 57 59.6
Thecc.03G292300 Theobroma cacao HOM05D001384 ORTHO05D001215 1.2e-07 59.3 54 61.1
Duzib084G1120 Durio zibethinus HOM05D001384 ORTHO05D001215 1.6e-07 58.9 57 59.6
Gohir.A07G139600 Gossypium hirsutum HOM05D001384 ORTHO05D001215 1.6e-07 58.9 56 58.9
BcaC02g12816 Brassica carinata HOM05D001384 ORTHO05D001215 2.1e-07 58.5 49 63.3
A05p01460 Brassica napus HOM05D001384 ORTHO05D001215 2.1e-07 58.5 49 63.3
C04p01650 Brassica napus HOM05D001384 ORTHO05D001215 2.1e-07 58.5 49 63.3
BolC4t21817H Brassica oleracea HOM05D001384 ORTHO05D001215 2.1e-07 58.5 49 63.3
BraA05t19143Z Brassica rapa HOM05D001384 ORTHO05D001215 2.1e-07 58.5 49 63.3
Thhalv10001752m.g Eutrema salsugineum HOM05D001384 ORTHO05D001215 3.6e-07 57.8 49 63.3
AT5G24105 Arabidopsis thaliana HOM05D001384 ORTHO05D001215 4.6e-07 57.4 61 59.0
Duzib068G0580 Durio zibethinus HOM05D001384 ORTHO05D001215 4.6e-07 57.4 56 58.9
Gohir.A12G234600 Gossypium hirsutum HOM05D001384 ORTHO05D001215 4.6e-07 57.4 57 57.9
TAR375G0324 Trochodendron aralioides HOM05D001384 ORTHO05D001215 6.1e-07 57.0 60 58.3
BcaC04g23523 Brassica carinata HOM05D001384 ORTHO05D001215 7.9e-07 56.6 61 57.4
C09p07390 Brassica napus HOM05D001384 ORTHO05D001215 7.9e-07 56.6 61 57.4
BolC9t53653H Brassica oleracea HOM05D001384 ORTHO05D001215 7.9e-07 56.6 61 57.4
BraA09t36309Z Brassica rapa HOM05D001384 ORTHO05D001215 7.9e-07 56.6 61 57.4
Duzib133G0751 Durio zibethinus HOM05D001384 ORTHO05D001215 7.9e-07 56.6 56 58.9
Duzib205G1079 Durio zibethinus HOM05D001384 ORTHO05D001215 7.9e-07 56.6 57 56.1
FAN06G1205 Fragaria x ananassa HOM05D001384 ORTHO05D001215 7.9e-07 56.6 57 54.4
BcaB01g03224 Brassica carinata HOM05D001384 ORTHO05D001215 1.0e-06 56.2 49 61.2
BcaB01g03229 Brassica carinata HOM05D001384 ORTHO05D001215 1.0e-06 56.2 49 61.2
BcaC02g12698 Brassica carinata HOM05D001384 ORTHO05D001215 1.0e-06 56.2 49 61.2
Gohir.A10G068700 Gossypium hirsutum HOM05D001384 ORTHO05D001215 1.0e-06 56.2 56 55.4
Gohir.A12G110700 Gossypium hirsutum HOM05D001384 ORTHO05D001215 1.0e-06 56.2 56 58.9
Gohir.D12G114000 Gossypium hirsutum HOM05D001384 ORTHO05D001215 1.0e-06 56.2 56 58.9
Sp4g28370 Schrenkiella parvula HOM05D001384 ORTHO05D001215 1.0e-06 56.2 49 61.2
A03p25570 Brassica napus HOM05D001384 ORTHO05D001215 1.4e-06 55.8 49 61.2
A06p34940 Brassica napus HOM05D001384 ORTHO05D001215 1.4e-06 55.8 61 55.7
C07p43610 Brassica napus HOM05D001384 ORTHO05D001215 1.4e-06 55.8 61 55.7
BolC7t44888H Brassica oleracea HOM05D001384 ORTHO05D001215 1.4e-06 55.8 61 55.7
BraA03t11773Z Brassica rapa HOM05D001384 ORTHO05D001215 1.4e-06 55.8 49 61.2
FAN06G2829 Fragaria x ananassa HOM05D001384 ORTHO05D001215 1.4e-06 55.8 57 54.4
Gohir.D11G099700 Gossypium hirsutum HOM05D001384 ORTHO05D001215 1.4e-06 55.8 56 58.9
Gohir.D12G235700 Gossypium hirsutum HOM05D001384 ORTHO05D001215 1.4e-06 55.8 57 56.1
Gorai.007G105900 Gossypium raimondii HOM05D001384 ORTHO05D001215 1.4e-06 55.8 56 58.9
THA.LOC104821373 Tarenaya hassleriana HOM05D001384 ORTHO05D001215 1.4e-06 55.8 61 57.4
AL4G45630 Arabidopsis lyrata HOM05D001384 ORTHO05D001215 1.8e-06 55.5 49 61.2
AT2G46330 Arabidopsis thaliana HOM05D001384 ORTHO05D001215 1.8e-06 55.5 49 61.2
EL10Ac3g05350 Beta vulgaris HOM05D001384 ORTHO05D001215 1.8e-06 55.5 60 61.7
A09p06620 Brassica napus HOM05D001384 ORTHO05D001215 1.8e-06 55.5 61 55.7
CsaV3_4G006390 Cucumis sativus L. HOM05D001384 ORTHO05D001215 1.8e-06 55.5 59 57.6
QL02p031550 Quercus lobata HOM05D001384 ORTHO05D001215 1.8e-06 55.5 60 58.3
Thecc.01G347500 Theobroma cacao HOM05D001384 ORTHO05D001215 1.8e-06 55.5 56 57.1
Atru.chr1.270 Acer truncatum HOM05D001384 ORTHO05D001215 2.3e-06 55.1 60 60.0
BcaC01g05077 Brassica carinata HOM05D001384 ORTHO05D001215 2.3e-06 55.1 49 59.2
C03p30500 Brassica napus HOM05D001384 ORTHO05D001215 2.3e-06 55.1 49 59.2
Carub.0004s2903 Capsella rubella HOM05D001384 ORTHO05D001215 2.3e-06 55.1 49 61.2
Carub.0006s2183 Capsella rubella HOM05D001384 ORTHO05D001215 2.3e-06 55.1 61 55.7
Gorai.001G156700 Gossypium raimondii HOM05D001384 ORTHO05D001215 2.3e-06 55.1 56 57.1
Manes.02G013300 Manihot esculenta HOM05D001384 ORTHO05D001215 2.3e-06 55.1 38 73.7
AT3G61640 Arabidopsis thaliana HOM05D001384 ORTHO05D001215 3.0e-06 54.7 56 53.6
BcaB02g08150 Brassica carinata HOM05D001384 ORTHO05D001215 3.0e-06 54.7 62 53.2
BcaNung01209 Brassica carinata HOM05D001384 ORTHO05D001215 3.0e-06 54.7 61 54.1
BraA04t15816Z Brassica rapa HOM05D001384 ORTHO05D001215 3.0e-06 54.7 62 53.2
CARHR141610 Cardamine hirsuta HOM05D001384 ORTHO05D001215 3.0e-06 54.7 50 58.0
Gohir.A10G199650 Gossypium hirsutum HOM05D001384 ORTHO05D001215 3.0e-06 54.7 56 57.1
Manes.14G018800 Manihot esculenta HOM05D001384 ORTHO05D001215 3.0e-06 54.7 61 52.5
Sed0009789 Sechium edule HOM05D001384 ORTHO05D001215 3.0e-06 54.7 61 55.7
A04p00990 Brassica napus HOM05D001384 ORTHO05D001215 3.9e-06 54.3 62 53.2
ClCG07G014860 Citrullus lanatus HOM05D001384 ORTHO05D001215 3.9e-06 54.3 59 55.9
COL.COLO4_06332 Corchorus olitorius HOM05D001384 ORTHO05D001215 3.9e-06 54.3 56 57.1
MELO3C032818.2 Cucumis melo HOM05D001384 ORTHO05D001215 3.9e-06 54.3 59 57.6
Oeu036887.1 Olea europaea HOM05D001384 ORTHO05D001215 3.9e-06 54.3 64 56.2
BraA06t26418Z Brassica rapa HOM05D001384 ORTHO05D001215 5.1e-06 53.9 61 54.1
Dinv37556 Davidia involucrata HOM05D001384 ORTHO05D001215 5.1e-06 53.9 60 55.0
Duzib138G1328 Durio zibethinus HOM05D001384 ORTHO05D001215 5.1e-06 53.9 56 58.9
MD01G1214900 Malus domestica HOM05D001384 ORTHO05D001215 5.1e-06 53.9 64 56.2
GSVIVG01028741001 Vitis vinifera HOM05D001384 ORTHO05D001215 5.1e-06 53.9 60 56.7
AL5G44040 Arabidopsis lyrata HOM05D001384 ORTHO05D001215 6.7e-06 53.5 56 53.6
arahy.Tifrunner.gnm1.ann1.JZQU6N Arachis hypogaea HOM05D001384 ORTHO05D001215 6.7e-06 53.5 43 65.1
arahy.Tifrunner.gnm1.ann1.XBFI6K Arachis hypogaea HOM05D001384 ORTHO05D001215 6.7e-06 53.5 43 65.1
COL.COLO4_21727 Corchorus olitorius HOM05D001384 ORTHO05D001215 6.7e-06 53.5 57 63.2
Dinv43894 Davidia involucrata HOM05D001384 ORTHO05D001215 6.7e-06 53.5 60 56.7
Gorai.008G123500 Gossypium raimondii HOM05D001384 ORTHO05D001215 6.7e-06 53.5 56 58.9
vmacro22519 Vaccinium macrocarpon HOM05D001384 ORTHO05D001215 6.7e-06 53.5 56 51.8
Carub.0005s2833 Capsella rubella HOM05D001384 ORTHO05D001215 8.8e-06 53.1 64 54.7
FvH4_7g30990 Fragaria vesca HOM05D001384 ORTHO05D001215 8.8e-06 53.1 57 54.4
Prupe.2G306800 Prunus persica HOM05D001384 ORTHO05D001215 8.8e-06 53.1 60 55.0


User provided reference genes

Program Settings