Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g028410 Medicago truncatula HOM05D001219 ORTHO05D001017 2.0e-112 409.1 202 100.0
Medtr1g028400 Medicago truncatula HOM05D001219 ORTHO05D001017 3.8e-26 122.5 110 59.1
Medtr4g006210 Medicago truncatula HOM05D001219 ORTHO05D001017 1.9e-22 110.2 92 59.8
TPR.G15724 Trifolium pratense HOM05D001219 ORTHO05D001017 1.1e-12 77.8 81 50.6
Medtr4g021835 Medicago truncatula HOM05D001219 ORTHO05D001017 1.8e-12 77.0 106 44.3
TPR.G16396 Trifolium pratense HOM05D001219 ORTHO05D001017 9.0e-12 74.7 101 43.6
TPR.G1111 Trifolium pratense HOM05D001219 ORTHO05D001017 1.5e-11 73.9 76 53.9
TPR.G15687 Trifolium pratense HOM05D001219 ORTHO05D001017 3.4e-11 72.8 78 52.6
Medtr6g027420 Medicago truncatula HOM05D001219 ORTHO05D001017 1.0e-10 71.2 77 51.9
Psat3g014520 Pisum sativum HOM05D001219 ORTHO05D001017 1.0e-10 71.2 47 68.1
Medtr4g021765 Medicago truncatula HOM05D001219 ORTHO05D001017 1.3e-10 70.9 76 47.4
TPR.G9692 Trifolium pratense HOM05D001219 ORTHO05D001017 5.0e-10 68.9 81 49.4
TPR.G26304 Trifolium pratense HOM05D001219 ORTHO05D001017 6.5e-10 68.6 49 65.3
TPR.G9668 Trifolium pratense HOM05D001219 ORTHO05D001017 6.5e-10 68.6 98 40.8
TPR.G29727 Trifolium pratense HOM05D001219 ORTHO05D001017 1.1e-09 67.8 118 38.1
Medtr4g059340 Medicago truncatula HOM05D001219 ORTHO05D001017 1.4e-09 67.4 83 48.2
Medtr4g024200 Medicago truncatula HOM05D001219 ORTHO05D001017 1.9e-09 67.0 75 48.0
Medtr4g006290 Medicago truncatula HOM05D001219 ORTHO05D001017 4.2e-09 65.9 75 50.7
TPR.G15720 Trifolium pratense HOM05D001219 ORTHO05D001017 4.2e-09 65.9 47 63.8
TPR.G9673 Trifolium pratense HOM05D001219 ORTHO05D001017 4.2e-09 65.9 104 42.3
TPR.G9690 Trifolium pratense HOM05D001219 ORTHO05D001017 7.1e-09 65.1 77 49.4
TPR.G15122 Trifolium pratense HOM05D001219 ORTHO05D001017 9.3e-09 64.7 48 64.6
TPR.G9658 Trifolium pratense HOM05D001219 ORTHO05D001017 9.3e-09 64.7 91 46.2
Medtr4g006450 Medicago truncatula HOM05D001219 ORTHO05D001017 1.2e-08 64.3 86 45.3
Medtr8g060730 Medicago truncatula HOM05D001219 ORTHO05D001017 1.2e-08 64.3 75 49.3
Medtr3g006050 Medicago truncatula HOM05D001219 ORTHO05D001017 2.7e-08 63.2 72 48.6
TPR.G19224 Trifolium pratense HOM05D001219 ORTHO05D001017 2.7e-08 63.2 79 49.4
TPR.G9682 Trifolium pratense HOM05D001219 ORTHO05D001017 2.7e-08 63.2 83 45.8
Medtr4g129140 Medicago truncatula HOM05D001219 ORTHO05D001017 3.5e-08 62.8 63 54.0
Medtr4g006240 Medicago truncatula HOM05D001219 ORTHO05D001017 4.6e-08 62.4 74 41.9
TPR.G9688 Trifolium pratense HOM05D001219 ORTHO05D001017 6.1e-08 62.0 107 43.0
Medtr1g023530 Medicago truncatula HOM05D001219 ORTHO05D001017 7.9e-08 61.6 128 34.4
Medtr3g110740 Medicago truncatula HOM05D001219 ORTHO05D001017 7.9e-08 61.6 80 43.8
TPR.G8802 Trifolium pratense HOM05D001219 ORTHO05D001017 7.9e-08 61.6 80 42.5
Medtr8g045190 Medicago truncatula HOM05D001219 ORTHO05D001017 1.0e-07 61.2 77 44.2
Ca_04901_v3 Cicer arietinum L. HOM05D001219 ORTHO05D001017 1.8e-07 60.5 73 42.5
Medtr5g067860 Medicago truncatula HOM05D001219 ORTHO05D001017 1.8e-07 60.5 49 63.3
Medtr5g068550 Medicago truncatula HOM05D001219 ORTHO05D001017 1.8e-07 60.5 48 56.2
Medtr8g446800 Medicago truncatula HOM05D001219 ORTHO05D001017 2.3e-07 60.1 120 40.8
TPR.G38799 Trifolium pratense HOM05D001219 ORTHO05D001017 2.3e-07 60.1 61 52.5
Ca_20555_v3 Cicer arietinum L. HOM05D001219 ORTHO05D001017 3.0e-07 59.7 101 39.6
Medtr1g050478 Medicago truncatula HOM05D001219 ORTHO05D001017 3.0e-07 59.7 77 46.8
Medtr6g016905 Medicago truncatula HOM05D001219 ORTHO05D001017 3.9e-07 59.3 76 47.4
Medtr3g036270 Medicago truncatula HOM05D001219 ORTHO05D001017 6.7e-07 58.5 51 62.7
Medtr6g016725 Medicago truncatula HOM05D001219 ORTHO05D001017 6.7e-07 58.5 60 58.3
Medtr8g076010 Medicago truncatula HOM05D001219 ORTHO05D001017 6.7e-07 58.5 104 35.6
TPR.G38764 Trifolium pratense HOM05D001219 ORTHO05D001017 6.7e-07 58.5 75 44.0
Medtr5g067910 Medicago truncatula HOM05D001219 ORTHO05D001017 8.7e-07 58.2 49 61.2
Medtr8g017160 Medicago truncatula HOM05D001219 ORTHO05D001017 8.7e-07 58.2 78 41.0
Medtr4g009055 Medicago truncatula HOM05D001219 ORTHO05D001017 1.1e-06 57.8 53 50.9
TPR.G26088 Trifolium pratense HOM05D000474 ORTHO05D003648 1.1e-06 57.8 87 41.4
Medtr8g037780 Medicago truncatula HOM05D001219 ORTHO05D001017 2.5e-06 56.6 78 41.0
TPR.G29719 Trifolium pratense HOM05D001219 ORTHO05D001017 3.3e-06 56.2 101 36.6
Medtr7g029535 Medicago truncatula HOM05D001219 ORTHO05D001017 4.3e-06 55.8 132 35.6
Medtr6g016915 Medicago truncatula HOM05D001219 ORTHO05D001017 5.7e-06 55.5 74 47.3
Medtr5g067490 Medicago truncatula HOM05D001219 ORTHO05D001017 7.4e-06 55.1 44 63.6
Psat7g258640 Pisum sativum HOM05D001219 ORTHO05D001017 7.4e-06 55.1 56 42.9
TPR.G18060 Trifolium pratense HOM05D001219 ORTHO05D001017 7.4e-06 55.1 53 49.1
Psat5g104160 Pisum sativum HOM05D001219 ORTHO05D001017 9.7e-06 54.7 73 42.5


User provided reference genes

Program Settings