Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g027170 Medicago truncatula HOM05D008382 ORTHO05D011503 1.1e-170 603.2 313 100.0
EL10Ac1g00890 Beta vulgaris HOM05D008382 ORTHO05D000002 9.3e-40 168.3 472 33.3
EL10As2g23215 Beta vulgaris HOM05D008382 ORTHO05D000002 9.6e-37 158.3 466 31.8
EL10Ac2g03748 Beta vulgaris HOM05D000004 ORTHO05D000002 7.1e-32 142.1 470 30.6
TPR.G29747 Trifolium pratense HOM05D000004 ORTHO05D000002 3.1e-27 126.7 458 29.3
EL10Ac3g06995 Beta vulgaris HOM05D000004 ORTHO05D000002 3.5e-23 113.2 100 59.0
EL10Ac2g03002 Beta vulgaris HOM05D000004 ORTHO05D000002 2.3e-22 110.5 449 28.5
BcaC07g39411 Brassica carinata HOM05D008382 ORTHO05D011503 5.1e-22 109.4 78 70.5
EL10Ac6g14458 Beta vulgaris HOM05D008382 ORTHO05D011503 8.7e-22 108.6 78 66.7
TPR.G864 Trifolium pratense HOM05D008382 ORTHO05D000002 2.5e-21 107.1 225 36.9
Medtr6g033835 Medicago truncatula HOM05D008382 ORTHO05D009660 9.0e-19 98.6 107 53.3
EL10Ac1g02257 Beta vulgaris HOM05D008382 ORTHO05D000002 1.2e-18 98.2 76 64.5
AUR62028416 Chenopodium quinoa HOM05D008382 ORTHO05D000563 1.2e-18 98.2 236 35.2
FvH4_3g40201 Fragaria vesca HOM05D000004 ORTHO05D000002 1.2e-18 98.2 423 24.6
Psat7g229400 Pisum sativum HOM05D010412 ORTHO05D011503 2.6e-18 97.1 72 69.4
RcHm_v2.0_Chr3g0452401 Rosa chinensis HOM05D000004 ORTHO05D000002 2.6e-18 97.1 91 52.7
EL10Ac3g06996 Beta vulgaris HOM05D008382 ORTHO05D000563 4.5e-18 96.3 284 31.7
FvH4_6g20603 Fragaria vesca HOM05D000004 ORTHO05D000002 1.0e-17 95.1 142 39.4
RcHm_v2.0_Chr3g0461881 Rosa chinensis HOM05D000004 ORTHO05D000002 1.3e-17 94.7 91 51.6
FvH4_3g27861 Fragaria vesca HOM05D000004 ORTHO05D000002 1.7e-17 94.4 91 48.4
BcaC03g16464 Brassica carinata HOM05D008382 ORTHO05D000563 8.5e-17 92.0 71 62.0
Psat1g014440 Pisum sativum HOM05D008382 ORTHO05D011503 1.9e-16 90.9 68 64.7
Psat5g279400 Pisum sativum HOM05D008382 ORTHO05D011503 2.7e-15 87.0 71 63.4
FvH4_4g14287 Fragaria vesca HOM05D000004 ORTHO05D000002 6.1e-15 85.9 91 46.2
FvH4_4g14286 Fragaria vesca HOM05D008382 ORTHO05D000563 1.0e-14 85.1 73 56.2
Carub.0001s4356 Capsella rubella HOM05D053214 ORTHO05D011503 1.4e-14 84.7 72 59.7
TPR.G4156 Trifolium pratense HOM05D000007 ORTHO05D000521 2.3e-14 84.0 293 30.0
Medtr4g061370 Medicago truncatula HOM05D000876 ORTHO05D000285 2.0e-13 80.9 78 59.0
FvH4_6g32371 Fragaria vesca HOM05D008382 ORTHO05D011503 3.3e-13 80.1 67 56.7
FvH4_2g17922 Fragaria vesca HOM05D000004 ORTHO05D000002 7.4e-13 79.0 91 44.0
Medtr2g076860 Medicago truncatula HOM05D008382 ORTHO05D011503 1.3e-12 78.2 54 68.5
Psat4g143480 Pisum sativum HOM05D010412 ORTHO05D011503 2.8e-12 77.0 55 67.3
Psat3g118480 Pisum sativum HOM05D010412 ORTHO05D011503 4.8e-12 76.3 69 55.1
EL10Ac6g14531 Beta vulgaris HOM05D000009 ORTHO05D000008 4.1e-11 73.2 50 64.0
Psat0s2851g0040 Pisum sativum HOM05D008382 ORTHO05D011503 9.1e-11 72.0 155 36.8
RcHm_v2.0_Chr7g0227361 Rosa chinensis HOM05D000038 ORTHO05D030549 1.5e-10 71.2 73 47.9
TPR.G116 Trifolium pratense HOM05D000004 ORTHO05D000002 2.0e-10 70.9 58 60.3
Potri.001G006850 Populus trichocarpa HOM05D028484 ORTHO05D000563 3.4e-10 70.1 73 43.8
EL10Ac5g11786 Beta vulgaris HOM05D000004 ORTHO05D000002 7.7e-10 68.9 233 34.8
Hma1.2p1_0253F.1_g103130 Hydrangea macrophylla HOM05D000004 ORTHO05D000563 7.7e-10 68.9 135 36.3
TPR.G40748 Trifolium pratense HOM05D000004 ORTHO05D000002 7.7e-10 68.9 59 57.6
FvH4_2g17921 Fragaria vesca HOM05D008382 ORTHO05D009660 1.0e-09 68.6 53 60.4
TAR135G0002 Trochodendron aralioides HOM05D000004 ORTHO05D000002 1.3e-09 68.2 73 43.8
Dinv38966 Davidia involucrata HOM05D000151 ORTHO05D000074 6.5e-09 65.9 73 42.5
PSO781G0082 Papaver somniferum HOM05D000004 ORTHO05D000002 1.1e-08 65.1 78 42.3
EL10Ac1g02256 Beta vulgaris HOM05D008382 ORTHO05D000563 1.4e-08 64.7 186 30.6
TPR.G39423 Trifolium pratense HOM05D000004 ORTHO05D000002 1.4e-08 64.7 64 51.6
TWI77G0626 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 3.2e-08 63.5 73 43.8
Atru.chr6.2464 Acer truncatum HOM05D000004 ORTHO05D000563 5.5e-08 62.8 73 42.5
PSO063G7224 Papaver somniferum HOM05D000004 ORTHO05D000002 7.2e-08 62.4 78 39.7
PSO832G1458 Papaver somniferum HOM05D000004 ORTHO05D009660 7.2e-08 62.4 78 39.7
Actinidia10157 Actinidia chinensis HOM05D000124 ORTHO05D009660 9.4e-08 62.0 60 50.0
QL09p008939 Quercus lobata HOM05D000004 ORTHO05D000002 9.4e-08 62.0 78 37.2
QL11p024776 Quercus lobata HOM05D000004 ORTHO05D000002 9.4e-08 62.0 78 37.2
FvH4_4g33448 Fragaria vesca HOM05D000004 ORTHO05D000002 1.2e-07 61.6 209 30.1
Psat1g151760 Pisum sativum HOM05D010412 ORTHO05D011503 1.6e-07 61.2 44 63.6
TAR143G0002 Trochodendron aralioides HOM05D000004 ORTHO05D000563 1.6e-07 61.2 83 34.9
Hund23938 Selenicereus undatus HOM05D000004 ORTHO05D000563 2.7e-07 60.5 80 38.8
PSO017G7238 Papaver somniferum HOM05D000004 ORTHO05D000002 4.7e-07 59.7 78 38.5
PSO170G4300 Papaver somniferum HOM05D000004 ORTHO05D000002 6.1e-07 59.3 78 38.5
PSO339G2721 Papaver somniferum HOM05D000004 ORTHO05D000002 6.1e-07 59.3 78 38.5
Cpa.g.sc154.5 Carica papaya HOM05D000004 ORTHO05D000563 7.9e-07 58.9 83 34.9
Hund10392 Selenicereus undatus HOM05D013854 ORTHO05D000563 7.9e-07 58.9 80 36.2
Hund20088 Selenicereus undatus HOM05D000004 ORTHO05D000563 1.0e-06 58.5 73 41.1
Hund19909 Selenicereus undatus HOM05D008634 ORTHO05D000695 1.4e-06 58.2 73 38.4
MBI03_g28299_MAGBIO Magnolia biondii HOM05D008755 ORTHO05D009660 1.8e-06 57.8 73 39.7
MBI18_g26690_MAGBIO Magnolia biondii HOM05D013991 ORTHO05D009660 1.8e-06 57.8 56 46.4
PGR031G3196 Punica granatum HOM05D000004 ORTHO05D000002 1.8e-06 57.8 78 35.9
PGR142G2802 Punica granatum HOM05D000004 ORTHO05D000002 1.8e-06 57.8 67 43.3
Hund08493 Selenicereus undatus HOM05D008980 ORTHO05D000563 1.8e-06 57.8 80 36.2
Psat5g040160 Pisum sativum HOM05D010412 ORTHO05D011503 2.3e-06 57.4 40 65.0
PGR031G1605 Punica granatum HOM05D000004 ORTHO05D000002 3.0e-06 57.0 78 35.9
PGR083G2735 Punica granatum HOM05D000004 ORTHO05D000002 3.0e-06 57.0 78 35.9
HanXRQChr10g0318501 Helianthus annuus HOM05D000004 ORTHO05D000002 3.9e-06 56.6 73 35.6
TPR.G23161 Trifolium pratense HOM05D008382 ORTHO05D000002 5.1e-06 56.2 92 43.5
EL10Ac4g08029 Beta vulgaris HOM05D008382 ORTHO05D011503 6.7e-06 55.8 52 55.8
Cpa.g.sc203.12 Carica papaya HOM05D000004 ORTHO05D000563 6.7e-06 55.8 78 33.3
PGR119G1621 Punica granatum HOM05D000004 ORTHO05D000563 8.8e-06 55.5 78 35.9
PGR119G2216 Punica granatum HOM05D000004 ORTHO05D000563 8.8e-06 55.5 147 29.3


User provided reference genes

Program Settings