Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g025810 Medicago truncatula HOM05D009090 ORTHO05D011038 1.4e-91 340.1 245 100.0
Medtr1g025830 Medicago truncatula HOM05D009090 ORTHO05D011038 6.8e-62 241.5 244 74.6
Medtr1g048260 Medicago truncatula HOM05D009090 ORTHO05D011038 5.0e-49 198.7 223 71.3
Medtr5g048270 Medicago truncatula HOM05D009090 ORTHO05D011038 7.1e-27 125.2 244 50.4
TPR.G67 Trifolium pratense HOM05D009090 ORTHO05D011038 6.2e-15 85.5 78 60.3
Medtr2g020500 Medicago truncatula HOM05D009090 ORTHO05D011038 3.1e-14 83.2 78 59.0
Lj6g0021162 Lotus japonicus HOM05D009090 ORTHO05D011038 1.5e-13 80.9 74 50.0
TPR.G38163 Trifolium pratense HOM05D009090 ORTHO05D011038 2.6e-13 80.1 78 57.7
Glyma.13G209700 Glycine max HOM05D009090 ORTHO05D011038 2.9e-12 76.6 72 51.4
TPR.G14182 Trifolium pratense HOM05D009090 ORTHO05D011038 3.8e-12 76.3 77 51.9
Ca_00615_v3 Cicer arietinum L. HOM05D009090 ORTHO05D011038 4.9e-12 75.9 79 49.4
Medtr2g021510 Medicago truncatula HOM05D009090 ORTHO05D011038 1.4e-11 74.3 72 52.8
VMungo0540G1607 Vigna mungo HOM05D009090 ORTHO05D011038 2.4e-11 73.6 67 50.7
Phvul.006G154800 Phaseolus vulgaris HOM05D009090 ORTHO05D011038 3.2e-11 73.2 67 50.7
Medtr2g021480 Medicago truncatula HOM05D009090 ORTHO05D011038 4.2e-11 72.8 78 51.3
Lalb_Chr15g0087331 Lupinus albus HOM05D009090 ORTHO05D011038 5.4e-11 72.4 67 52.2
Medtr2g021530 Medicago truncatula HOM05D009090 ORTHO05D011038 2.1e-10 70.5 78 44.9
Medtr2g021660 Medicago truncatula HOM05D009090 ORTHO05D011038 2.7e-10 70.1 69 50.7
Medtr2g021590 Medicago truncatula HOM05D009090 ORTHO05D011038 3.5e-10 69.7 81 48.1
Medtr3g087310 Medicago truncatula HOM05D009090 ORTHO05D011038 7.8e-10 68.6 63 50.8
Psat1g184400 Pisum sativum HOM05D009090 ORTHO05D011038 1.7e-09 67.4 65 49.2
Medtr2g021560 Medicago truncatula HOM05D009090 ORTHO05D011038 5.1e-09 65.9 79 45.6
arahy.Tifrunner.gnm1.ann1.SV24MS Arachis hypogaea HOM05D009090 ORTHO05D011038 6.6e-09 65.5 70 45.7
Medtr2g022750 Medicago truncatula HOM05D009090 ORTHO05D011038 8.7e-09 65.1 64 51.6
Medtr0485s0020 Medicago truncatula HOM05D009090 ORTHO05D011038 1.1e-08 64.7 68 50.0
Medtr2g021640 Medicago truncatula HOM05D009090 ORTHO05D011038 1.5e-08 64.3 63 52.4
Medtr2g021600 Medicago truncatula HOM05D009090 ORTHO05D011038 1.9e-08 63.9 78 46.2
TPR.G14178 Trifolium pratense HOM05D009090 ORTHO05D011038 1.9e-08 63.9 57 59.6
Medtr2g021450 Medicago truncatula HOM05D009090 ORTHO05D011038 4.3e-08 62.8 73 43.8
Medtr2g021570 Medicago truncatula HOM05D009090 ORTHO05D011038 7.3e-08 62.0 59 50.8
Medtr2g021630 Medicago truncatula HOM05D009090 ORTHO05D011038 1.3e-07 61.2 62 56.5
Lj2g0028230 Lotus japonicus HOM05D000007 ORTHO05D000017 3.6e-07 59.7 51 52.9
Ca_10652_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000017 4.8e-07 59.3 50 50.0
Medtr1g047490 Medicago truncatula HOM05D000007 ORTHO05D000017 8.1e-07 58.5 70 41.4
Dinv06198 Davidia involucrata HOM05D000007 ORTHO05D000039 1.1e-06 58.2 60 41.7
Lj6g0001868 Lotus japonicus HOM05D000007 ORTHO05D000017 1.4e-06 57.8 67 40.3
Phvul.006G157000 Phaseolus vulgaris HOM05D000007 ORTHO05D000017 1.8e-06 57.4 51 49.0
VMungo0540G1914 Vigna mungo HOM05D000007 ORTHO05D000017 1.8e-06 57.4 51 49.0
Medtr1g097490 Medicago truncatula HOM05D000007 ORTHO05D000017 3.1e-06 56.6 52 46.2
Glyma.15G101600 Glycine max HOM05D000007 ORTHO05D000017 4.0e-06 56.2 51 47.1
Medtr1g025850 Medicago truncatula HOM05D009090 ORTHO05D011038 4.0e-06 56.2 62 41.9
Glyma.13G211000 Glycine max HOM05D000007 ORTHO05D000017 9.0e-06 55.1 45 51.1
Lj6g0014323 Lotus japonicus HOM05D000007 ORTHO05D000017 9.0e-06 55.1 71 39.4


User provided reference genes

Program Settings