Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g024870 Medicago truncatula HOM05D000003 ORTHO05D000006 1.5e-55 219.2 101 100.0
TPR.G20743 Trifolium pratense HOM05D000003 ORTHO05D000006 1.0e-11 73.6 70 42.9
Sabra15G0018400 Salix brachista HOM05D000003 ORTHO05D000006 2.9e-11 72.0 68 47.1
Sabra15G0020900 Salix brachista HOM05D000003 ORTHO05D000006 3.8e-11 71.6 68 45.6
TPR.G39703 Trifolium pratense HOM05D000003 ORTHO05D000007 5.0e-11 71.2 62 50.0
TPR.G21254 Trifolium pratense HOM05D000003 ORTHO05D000006 8.5e-11 70.5 74 45.9
TPR.G14759 Trifolium pratense HOM05D000003 ORTHO05D000006 2.5e-10 68.9 70 41.4
Glyma.07G238625 Glycine max HOM05D000003 ORTHO05D000006 2.7e-09 65.5 66 42.4
TPR.G11139 Trifolium pratense HOM05D000003 ORTHO05D000007 3.6e-09 65.1 70 48.6
RcHm_v2.0_Chr5g0053531 Rosa chinensis HOM05D000003 ORTHO05D000004 4.7e-09 64.7 76 40.8
FvH4_2g11954 Fragaria vesca HOM05D000003 ORTHO05D000006 8.0e-09 63.9 85 29.4
FvH4_1g29781 Fragaria vesca HOM05D010299 ORTHO05D019146 1.4e-08 63.2 78 41.0
FvH4_2g12002 Fragaria vesca HOM05D000003 ORTHO05D000006 1.4e-08 63.2 75 30.7
TPR.G10050 Trifolium pratense HOM05D000003 ORTHO05D000006 1.8e-08 62.8 73 42.5
FvH4_5g27994 Fragaria vesca HOM05D000003 ORTHO05D000004 6.7e-08 60.8 72 37.5
TPR.G34599 Trifolium pratense HOM05D000003 ORTHO05D000006 8.8e-08 60.5 64 43.8
TPR.G35802 Trifolium pratense HOM05D000003 ORTHO05D000007 1.5e-07 59.7 63 42.9
Potri.018G064450 Populus trichocarpa HOM05D000003 ORTHO05D000006 2.6e-07 58.9 63 41.3
Atru.chr4.1865 Acer truncatum HOM05D000003 ORTHO05D000006 3.3e-07 58.5 68 39.7
FvH4_6g46881 Fragaria vesca HOM05D000003 ORTHO05D000022 3.3e-07 58.5 76 38.2
FvH4_5g34261 Fragaria vesca HOM05D000003 ORTHO05D000006 4.4e-07 58.2 72 37.5
RcHm_v2.0_Chr1g0342601 Rosa chinensis HOM05D000003 ORTHO05D000006 4.4e-07 58.2 76 38.2
Atru.chr10.629 Acer truncatum HOM05D000003 ORTHO05D000004 5.7e-07 57.8 70 37.1
Atru.chr1.2428 Acer truncatum HOM05D000003 ORTHO05D000004 9.7e-07 57.0 61 42.6
arahy.Tifrunner.gnm1.ann1.7MJ6N9 Arachis hypogaea HOM05D000003 ORTHO05D000006 9.7e-07 57.0 59 39.0
RcHm_v2.0_Chr2g0146151 Rosa chinensis HOM05D000003 ORTHO05D000006 2.2e-06 55.8 76 31.6
Atru.chr9.1348 Acer truncatum HOM05D000003 ORTHO05D000006 3.7e-06 55.1 70 34.3
LjContig00029g0014189 Lotus japonicus HOM05D000003 ORTHO05D000006 3.7e-06 55.1 60 40.0
QL02p071422 Quercus lobata HOM05D000003 ORTHO05D000006 3.7e-06 55.1 66 33.3
Atru.chr1.776 Acer truncatum HOM05D000003 ORTHO05D000004 6.3e-06 54.3 70 34.3
FvH4_2g12222 Fragaria vesca HOM05D000003 ORTHO05D000006 6.3e-06 54.3 86 34.9


User provided reference genes

Program Settings