Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g024840 Medicago truncatula HOM05D007166 ORTHO05D009039 1.8e-71 272.7 158 100.0
TPR.G34359 Trifolium pratense HOM05D007166 ORTHO05D009039 1.1e-65 253.4 159 93.7
Lalb_Chr22g0354371 Lupinus albus HOM05D007166 ORTHO05D009039 2.2e-58 229.2 158 87.3
Phvul.001G007500 Phaseolus vulgaris HOM05D007166 ORTHO05D009039 3.6e-56 221.9 158 84.8
VMungo0647G2551 Vigna mungo HOM05D007166 ORTHO05D009039 2.3e-55 219.2 158 84.8
Glyma.14G218200 Glycine max HOM05D007166 ORTHO05D009039 1.1e-54 216.9 156 84.0
Lj5g0017261 Lotus japonicus HOM05D007166 ORTHO05D009039 3.5e-51 205.3 196 68.4
Glyma.17G257400 Glycine max HOM05D007166 ORTHO05D009039 7.7e-51 204.1 156 82.1
GSVIVG01009888001 Vitis vinifera HOM05D007166 ORTHO05D009039 6.5e-50 201.1 159 76.1
CANSAT25G3739 Cannabis sativa HOM05D007166 ORTHO05D009039 8.5e-50 200.7 166 75.9
Potri.002G023600 Populus trichocarpa HOM05D007166 ORTHO05D009039 5.5e-49 198.0 155 78.7
QL02p011380 Quercus lobata HOM05D007166 ORTHO05D009039 2.1e-48 196.1 159 76.7
MELO3C003759.2 Cucumis melo HOM05D007166 ORTHO05D009039 2.7e-48 195.7 160 76.9
CAN.G311.15 Capsicum annuum HOM05D007166 ORTHO05D009039 1.0e-47 193.7 152 78.9
Dinv31833 Davidia involucrata HOM05D007166 ORTHO05D009039 1.0e-47 193.7 147 78.2
RcHm_v2.0_Chr6g0302691 Rosa chinensis HOM05D007166 ORTHO05D009039 1.0e-47 193.7 157 75.8
CsaV3_3G045770 Cucumis sativus L. HOM05D007166 ORTHO05D009039 3.0e-47 192.2 160 75.0
Peaxi162Scf00438g00619 Petunia axillaris HOM05D007166 ORTHO05D009039 3.0e-47 192.2 151 78.1
Sabra02G0019200 Salix brachista HOM05D007166 ORTHO05D009039 3.0e-47 192.2 155 76.8
Eucgr.F00601 Eucalyptus grandis HOM05D007166 ORTHO05D009039 8.8e-47 190.7 160 75.6
MD15G1013500 Malus domestica HOM05D007166 ORTHO05D009039 8.8e-47 190.7 157 78.3
Sed0018016 Sechium edule HOM05D007166 ORTHO05D009039 1.2e-46 190.3 163 76.1
Oeu007334.1 Olea europaea HOM05D007166 ORTHO05D009039 1.5e-46 189.9 153 75.8
Lj4A797T62 Lonicera japonica HOM05D007166 ORTHO05D009039 2.0e-46 189.5 165 73.3
Potri.005G237800 Populus trichocarpa HOM05D007166 ORTHO05D009039 2.0e-46 189.5 156 73.7
Atru.chr13.311 Acer truncatum HOM05D007166 ORTHO05D009039 2.6e-46 189.1 165 72.1
Haze_22621 Corylus avellana HOM05D007166 ORTHO05D009039 3.4e-46 188.7 160 74.4
Prupe.1G367000 Prunus persica HOM05D007166 ORTHO05D009039 4.4e-46 188.3 162 75.3
Migut.C00807 Erythranthe guttata HOM05D007166 ORTHO05D009039 5.7e-46 188.0 153 77.1
CiPaw.08G065500 Carya illinoinensis HOM05D007166 ORTHO05D009039 7.5e-46 187.6 161 73.9
Sopen04g034940 Solanum pennellii HOM05D007166 ORTHO05D009039 9.8e-46 187.2 155 75.5
Cc10_g01790 Coffea canephora HOM05D007166 ORTHO05D009039 1.3e-45 186.8 162 74.1
Rhsim06G0022200 Rhododendron simsii HOM05D007166 ORTHO05D009039 1.7e-45 186.4 153 76.5
Solyc04g081320.4 Solanum lycopersicum HOM05D007166 ORTHO05D009039 2.2e-45 186.0 155 74.8
ClCG05G018350 Citrullus lanatus HOM05D007166 ORTHO05D009039 6.3e-45 184.5 153 75.2
Duzib093G1587 Durio zibethinus HOM05D007166 ORTHO05D009039 8.3e-45 184.1 152 73.0
Duzib116G0210 Durio zibethinus HOM05D007166 ORTHO05D009039 1.1e-44 183.7 159 71.7
Thecc.08G042800 Theobroma cacao HOM05D007166 ORTHO05D009039 1.1e-44 183.7 158 72.2
PGR031G2037 Punica granatum HOM05D007166 ORTHO05D009039 1.4e-44 183.3 162 73.5
PSO170G1901 Papaver somniferum HOM05D007166 ORTHO05D009039 2.4e-44 182.6 149 76.5
COL.COLO4_26159 Corchorus olitorius HOM05D007166 ORTHO05D009039 3.1e-44 182.2 154 72.7
FAN20G1945 Fragaria x ananassa HOM05D007166 ORTHO05D009039 3.1e-44 182.2 168 70.2
PSO700G0103 Papaver somniferum HOM05D007166 ORTHO05D009039 5.4e-44 181.4 147 75.5
MSTRG.1201 Avicennia marina HOM05D007166 ORTHO05D009039 7.0e-44 181.0 150 75.3
arahy.Tifrunner.gnm1.ann1.74SAHL Arachis hypogaea HOM05D007166 ORTHO05D009039 1.2e-43 180.3 146 81.5
Actinidia15414 Actinidia chinensis HOM05D007166 ORTHO05D009039 1.6e-43 179.9 148 75.7
Gohir.D06G000600 Gossypium hirsutum HOM05D007166 ORTHO05D009039 1.6e-43 179.9 157 70.1
Gorai.010G005000 Gossypium raimondii HOM05D007166 ORTHO05D009039 1.6e-43 179.9 157 70.1
AT1G75690 Arabidopsis thaliana HOM05D007166 ORTHO05D009039 2.7e-43 179.1 151 74.8
Nn5g29333 Nelumbo nucifera HOM05D007166 ORTHO05D009039 2.7e-43 179.1 157 73.2
Carub.0002s2253 Capsella rubella HOM05D007166 ORTHO05D009039 3.5e-43 178.7 151 72.8
FvH4_2g38630 Fragaria vesca HOM05D007166 ORTHO05D009039 3.5e-43 178.7 150 74.7
HPP92_015209 Vanilla planifolia HOM05D007166 ORTHO05D009039 4.5e-43 178.3 154 76.6
Gohir.A06G004800 Gossypium hirsutum HOM05D007166 ORTHO05D009039 7.7e-43 177.6 157 69.4
Sp5g30800 Schrenkiella parvula HOM05D007166 ORTHO05D009039 7.7e-43 177.6 156 75.0
unitig_46.g17964 Utricularia gibba HOM05D007166 ORTHO05D009039 7.7e-43 177.6 160 69.4
CARHR069090 Cardamine hirsuta HOM05D007166 ORTHO05D009039 1.0e-42 177.2 151 74.8
TAR628G0810 Trochodendron aralioides HOM05D007166 ORTHO05D009039 1.0e-42 177.2 149 76.5
BcaC08g47053 Brassica carinata HOM05D007166 ORTHO05D009039 1.3e-42 176.8 154 72.1
THA.LOC104813791 Tarenaya hassleriana HOM05D007166 ORTHO05D009039 1.3e-42 176.8 160 71.9
TWI56G1425 Tripterygium wilfordii HOM05D007166 ORTHO05D009039 1.3e-42 176.8 150 74.7
CSS0019896 Camellia sinensis var. sinensis HOM05D007166 ORTHO05D009039 3.8e-42 175.3 150 76.0
FAN15G1492 Fragaria x ananassa HOM05D007166 ORTHO05D009039 6.5e-42 174.5 196 60.7
MD08G1014000 Malus domestica HOM05D007166 ORTHO05D009039 8.5e-42 174.1 150 76.0
Os03g0244000 Oryza sativa ssp. japonica HOM05D007166 ORTHO05D009039 1.1e-41 173.7 153 72.5
Aa31LG4G5920 Aethionema arabicum HOM05D007166 ORTHO05D009039 2.5e-41 172.6 151 71.5
SGA_v2.0_scaffold92G28245 Striga asiatica HOM05D007166 ORTHO05D009039 2.5e-41 172.6 152 71.7
BcaC03g15610 Brassica carinata HOM05D007166 ORTHO05D009039 7.2e-41 171.0 158 70.9
AL2G35670 Arabidopsis lyrata HOM05D007166 ORTHO05D009039 1.6e-40 169.9 147 74.1
DCAR_017474 Daucus carota HOM05D007166 ORTHO05D009039 1.6e-40 169.9 160 73.1
Lsat_1_v5_gn_9_46261 Lactuca sativa HOM05D007166 ORTHO05D009039 2.1e-40 169.5 153 73.2
PGSC0003DMG400003776 Solanum tuberosum HOM05D007166 ORTHO05D009039 6.1e-40 167.9 191 51.3
Zm00001eb081060 Zea mays HOM05D007166 ORTHO05D009039 8.0e-40 167.5 153 71.9
Thhalv10019268m.g Eutrema salsugineum HOM05D007166 ORTHO05D009039 1.4e-39 166.8 154 72.1
BolC6t40002H Brassica oleracea HOM05D007166 ORTHO05D009039 1.8e-39 166.4 147 71.4
CDE02G4515 Ceratophyllum demersum HOM05D007166 ORTHO05D009039 1.8e-39 166.4 119 83.2
Manes.18G014600 Manihot esculenta HOM05D007166 ORTHO05D009039 2.3e-39 166.0 156 73.1
HanXRQChr05g0146521 Helianthus annuus HOM05D007166 ORTHO05D009039 3.0e-39 165.6 155 71.6
A07p41210 Brassica napus HOM05D007166 ORTHO05D009039 4.0e-39 165.2 154 68.8
BraA07t31656Z Brassica rapa HOM05D007166 ORTHO05D009039 1.5e-38 163.3 147 70.7
ECA232G5036 Erigeron canadensis HOM05D007166 ORTHO05D009039 2.6e-38 162.5 118 80.5
BolC2t09326H Brassica oleracea HOM05D007166 ORTHO05D009039 4.4e-38 161.8 151 70.2
EL10Ac5g11627 Beta vulgaris HOM05D007166 ORTHO05D009039 5.7e-38 161.4 159 68.6
A02p20150 Brassica napus HOM05D007166 ORTHO05D009039 7.5e-38 161.0 144 70.1
C02p33780 Brassica napus HOM05D007166 ORTHO05D009039 9.8e-38 160.6 151 70.2
C06p49630 Brassica napus HOM05D007166 ORTHO05D009039 9.8e-38 160.6 145 70.3
BraA02t07050Z Brassica rapa HOM05D007166 ORTHO05D009039 1.3e-37 160.2 151 68.9
AagrBONN_evm.TU.Sc2ySwM_369.321 Anthoceros agrestis HOM05D007166 ORTHO05D009039 5.0e-34 148.3 115 73.9
Pp3s104_40 Physcomitrium patens HOM05D007166 ORTHO05D009039 8.6e-34 147.5 115 74.8
Pp3c22_16100 Physcomitrium patens HOM05D007166 ORTHO05D009039 2.5e-33 146.0 150 60.7
SMO165G0060 Selaginella moellendorffii HOM05D007166 ORTHO05D009039 1.2e-30 137.1 115 71.3
Mapoly0005s0157 Marchantia polymorpha HOM05D007166 ORTHO05D009039 5.7e-30 134.8 132 67.4
CDE02G3586 Ceratophyllum demersum HOM05D007166 ORTHO05D009039 2.9e-29 132.5 99 68.7
Ciclev10002412m.g Citrus clementina HOM05D007166 ORTHO05D009039 2.4e-28 129.4 171 49.7
AUR62036485 Chenopodium quinoa HOM05D007166 ORTHO05D009039 4.1e-28 128.6 158 60.8
Nitab4.5_0001540g0050 Nicotiana tabacum HOM05D007166 ORTHO05D009039 7.0e-28 127.9 149 51.7
Cfa013938 Carpinus fangiana HOM05D007166 ORTHO05D009039 5.9e-27 124.8 185 45.4
CBR_g44435 Chara braunii HOM05D007166 ORTHO05D009039 8.6e-26 120.9 110 66.4
Cpa.g.sc1059.4 Carica papaya HOM05D007166 ORTHO05D009039 4.3e-25 118.6 103 61.2
BcaB05g24933 Brassica carinata HOM05D007166 ORTHO05D009039 9.5e-25 117.5 147 49.7
HPP92_015221 Vanilla planifolia HOM05D007166 ORTHO05D009039 5.2e-23 111.7 94 68.1
AUR62037091 Chenopodium quinoa HOM05D007166 ORTHO05D009039 1.5e-22 110.2 128 51.6
arahy.Tifrunner.gnm1.ann1.MS74EG Arachis hypogaea HOM05D007166 ORTHO05D009039 2.6e-22 109.4 147 51.7
Aqoxy5G01769 Aquilegia oxysepala HOM05D007166 ORTHO05D009039 2.3e-15 86.3 94 54.3
MBI09_g08444_MAGBIO Magnolia biondii HOM05D007166 ORTHO05D009039 2.1e-11 73.2 96 42.7
ATR0912G003 Amborella trichopoda HOM05D007166 ORTHO05D009039 2.7e-11 72.8 60 58.3
Hund05201 Selenicereus undatus HOM05D007166 ORTHO05D009039 7.8e-11 71.2 62 64.5
Thecc.09G255600 Theobroma cacao HOM05D007166 ORTHO05D009039 1.7e-10 70.1 106 43.4
EL10Ac4g08279 Beta vulgaris HOM05D007166 ORTHO05D009039 4.4e-06 55.5 61 52.5


User provided reference genes

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