Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g023925 Medicago truncatula HOM05D004047 ORTHO05D004772 6.2e-52 207.2 108 100.0
Medtr1g023760 Medicago truncatula HOM05D004047 ORTHO05D004772 1.2e-18 96.7 116 53.4
Psat6g004160 Pisum sativum HOM05D004047 ORTHO05D004772 5.9e-18 94.4 170 42.9
Glyma.04G026000 Glycine max HOM05D004047 ORTHO05D004772 1.1e-13 80.1 111 47.7
Lalb_Chr08g0246131 Lupinus albus HOM05D004047 ORTHO05D004772 3.3e-13 78.6 98 53.1
Lj5g0017583 Lotus japonicus HOM05D004047 ORTHO05D004772 4.4e-13 78.2 150 41.3
Ca_13402_v3 Cicer arietinum L. HOM05D004047 ORTHO05D004772 2.2e-12 75.9 103 50.5
Ca_13415_v3 Cicer arietinum L. HOM05D004047 ORTHO05D004772 2.2e-12 75.9 103 50.5
Ca_29786_v3 Cicer arietinum L. HOM05D004047 ORTHO05D004772 2.2e-12 75.9 103 50.5
Glyma.06G025800 Glycine max HOM05D004047 ORTHO05D004772 3.7e-12 75.1 111 45.9
VMungo1309G2404 Vigna mungo HOM05D004047 ORTHO05D004772 4.8e-12 74.7 111 45.0
Lj1g0015956 Lotus japonicus HOM05D004047 ORTHO05D004772 1.1e-11 73.6 109 46.8
Phvul.009G015200 Phaseolus vulgaris HOM05D004047 ORTHO05D004772 1.8e-11 72.8 55 67.3
Lalb_Chr11g0062011 Lupinus albus HOM05D004047 ORTHO05D004772 3.1e-11 72.0 111 44.1
TWI56G0272 Tripterygium wilfordii HOM05D004047 ORTHO05D004772 4.1e-11 71.6 108 44.4
arahy.Tifrunner.gnm1.ann1.GHU3Y0 Arachis hypogaea HOM05D004047 ORTHO05D004772 5.3e-11 71.2 95 48.4
Lalb_Chr14g0369751 Lupinus albus HOM05D004047 ORTHO05D004772 9.1e-11 70.5 98 50.0
arahy.Tifrunner.gnm1.ann1.261ZZU Arachis hypogaea HOM05D004047 ORTHO05D004772 1.2e-10 70.1 95 49.5
CiPaw.08G064100 Carya illinoinensis HOM05D004047 ORTHO05D004772 4.5e-10 68.2 112 44.6
Dinv31823 Davidia involucrata HOM05D004047 ORTHO05D004772 2.2e-09 65.9 110 43.6
Thecc.08G040700 Theobroma cacao HOM05D004047 ORTHO05D004772 1.5e-08 63.2 56 60.7
TAR381G0884 Trochodendron aralioides HOM05D004047 ORTHO05D004772 1.5e-08 63.2 109 45.0
Cfa013920 Carpinus fangiana HOM05D004047 ORTHO05D004772 1.9e-08 62.8 111 38.7
Potri.005G236200 Populus trichocarpa HOM05D004047 ORTHO05D004772 1.9e-08 62.8 98 43.9
Atru.chr13.329 Acer truncatum HOM05D004047 ORTHO05D004772 2.5e-08 62.4 112 40.2
CANSAT25G0097 Cannabis sativa HOM05D004047 ORTHO05D004772 2.5e-08 62.4 71 52.1
Potri.002G025200 Populus trichocarpa HOM05D004047 ORTHO05D004772 2.5e-08 62.4 111 43.2
Duzib093G0674 Durio zibethinus HOM05D004047 ORTHO05D004772 7.2e-08 60.8 106 41.5
Nn6g32284 Nelumbo nucifera HOM05D004047 ORTHO05D004772 9.4e-08 60.5 54 59.3
Sabra02G0020200 Salix brachista HOM05D004047 ORTHO05D004772 9.4e-08 60.5 94 44.7
Aqoxy6G02326 Aquilegia oxysepala HOM05D004047 ORTHO05D004772 1.2e-07 60.1 97 45.4
Nn5g29267 Nelumbo nucifera HOM05D004047 ORTHO05D004772 1.2e-07 60.1 93 41.9
Manes.18G016100 Manihot esculenta HOM05D004047 ORTHO05D004772 1.6e-07 59.7 112 40.2
Dinv39497 Davidia involucrata HOM05D004047 ORTHO05D004772 2.1e-07 59.3 110 41.8
Ciclev10000295m.g Citrus clementina HOM05D004047 ORTHO05D004772 2.7e-07 58.9 112 42.9
Cpa.g.sc26.21 Carica papaya HOM05D004047 ORTHO05D004772 3.6e-07 58.5 95 42.1
Gohir.A01G112700 Gossypium hirsutum HOM05D004047 ORTHO05D004772 4.7e-07 58.2 104 41.3
FvH4_2g38820 Fragaria vesca HOM05D004047 ORTHO05D004772 6.1e-07 57.8 104 40.4
FAN15G3510 Fragaria x ananassa HOM05D004047 ORTHO05D004772 6.1e-07 57.8 104 40.4
TAR376G1182 Trochodendron aralioides HOM05D004047 ORTHO05D004772 6.1e-07 57.8 97 43.3
Gohir.D01G099500 Gossypium hirsutum HOM05D004047 ORTHO05D004772 8.0e-07 57.4 104 45.2
Gorai.002G124800 Gossypium raimondii HOM05D004047 ORTHO05D004772 8.0e-07 57.4 104 45.2
Peaxi162Scf00287g01716 Petunia axillaris HOM05D004047 ORTHO05D004772 8.0e-07 57.4 92 45.7
Aqoxy5G01461 Aquilegia oxysepala HOM05D004047 ORTHO05D004772 1.0e-06 57.0 96 40.6
Lj4A794G38 Lonicera japonica HOM05D004047 ORTHO05D004772 1.0e-06 57.0 85 48.2
CAN.G1271.11 Capsicum annuum HOM05D004047 ORTHO05D004772 1.4e-06 56.6 92 44.6
ECA233G3940 Erigeron canadensis HOM05D004047 ORTHO05D004772 1.8e-06 56.2 64 51.6
Gohir.D06G001400 Gossypium hirsutum HOM05D004047 ORTHO05D004772 1.8e-06 56.2 108 40.7
Gorai.010G005800 Gossypium raimondii HOM05D004047 ORTHO05D004772 1.8e-06 56.2 108 40.7
Gohir.A06G005600 Gossypium hirsutum HOM05D004047 ORTHO05D004772 2.3e-06 55.8 108 40.7
FAN27G1251 Fragaria x ananassa HOM05D004047 ORTHO05D004772 3.0e-06 55.5 104 39.4
Oeu027553.1 Olea europaea HOM05D004047 ORTHO05D004772 3.0e-06 55.5 55 56.4
QL02p010984 Quercus lobata HOM05D004047 ORTHO05D004772 3.0e-06 55.5 95 40.0
Hund05219 Selenicereus undatus HOM05D004047 ORTHO05D004772 3.0e-06 55.5 110 41.8
arahy.Tifrunner.gnm1.ann1.7CTW4M Arachis hypogaea HOM05D004047 ORTHO05D004772 5.2e-06 54.7 105 38.1
CSS0011131 Camellia sinensis var. sinensis HOM05D004047 ORTHO05D004772 5.2e-06 54.7 91 41.8
Hma1.2p1_2476F.1_g322840 Hydrangea macrophylla HOM05D004047 ORTHO05D004772 5.2e-06 54.7 109 40.4
Nitab4.5_0005185g0030 Nicotiana tabacum HOM05D004047 ORTHO05D004772 6.7e-06 54.3 92 42.4
PGR083G1283 Punica granatum HOM05D004047 ORTHO05D004772 6.7e-06 54.3 110 38.2
Actinidia15402 Actinidia chinensis HOM05D004047 ORTHO05D004772 8.8e-06 53.9 54 57.4
arahy.Tifrunner.gnm1.ann1.D2JYDS Arachis hypogaea HOM05D004047 ORTHO05D004772 8.8e-06 53.9 105 38.1
MD15G1014800 Malus domestica HOM05D004047 ORTHO05D004772 8.8e-06 53.9 107 43.0


User provided reference genes

Program Settings