Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g013010 Medicago truncatula HOM05D006351 ORTHO05D007796 2.3e-38 161.8 82 100.0
Psat6g028600 Pisum sativum HOM05D006351 ORTHO05D007796 1.7e-17 92.4 66 72.7
TPR.G32564 Trifolium pratense HOM05D006351 ORTHO05D007796 1.7e-17 92.4 66 72.7
Phvul.001G047200 Phaseolus vulgaris HOM05D006351 ORTHO05D007796 3.8e-17 91.3 66 74.2
Ca_13046_v3 Cicer arietinum L. HOM05D006351 ORTHO05D007796 6.5e-17 90.5 66 71.2
Medtr4g014840 Medicago truncatula HOM05D006351 ORTHO05D007796 8.4e-17 90.1 66 71.2
VMungo0647G0679 Vigna mungo HOM05D006351 ORTHO05D007796 1.1e-16 89.7 72 65.3
Lj5g0002049 Lotus japonicus HOM05D006351 ORTHO05D007796 2.3e-14 82.0 66 66.7
Lalb_Chr22g0361451 Lupinus albus HOM05D006351 ORTHO05D007796 1.9e-13 79.0 66 63.6
arahy.Tifrunner.gnm1.ann1.5RBZ70 Arachis hypogaea HOM05D006351 ORTHO05D007796 3.1e-11 71.6 98 45.9
arahy.Tifrunner.gnm1.ann1.7H8NL8 Arachis hypogaea HOM05D006351 ORTHO05D007796 4.0e-11 71.2 98 45.9
arahy.Tifrunner.gnm1.ann1.DQM65W Arachis hypogaea HOM05D006351 ORTHO05D007796 4.0e-11 71.2 98 45.9
arahy.Tifrunner.gnm1.ann1.52204A Arachis hypogaea HOM05D006351 ORTHO05D007796 5.3e-11 70.9 98 44.9
Atru.chr7.2503_Atru.chr7.2504 Acer truncatum HOM05D006351 ORTHO05D007796 2.9e-09 65.1 66 50.0
Thecc.09G019400 Theobroma cacao HOM05D006351 ORTHO05D007796 1.9e-08 62.4 66 47.0
Haze_21455 Corylus avellana HOM05D006351 ORTHO05D007796 2.5e-08 62.0 66 51.5
Sabra06G0202800 Salix brachista HOM05D006351 ORTHO05D007796 2.5e-08 62.0 66 54.5
BcaC04g19265 Brassica carinata HOM05D006351 ORTHO05D007796 3.2e-08 61.6 72 44.4
A10p26650 Brassica napus HOM05D006351 ORTHO05D007796 3.2e-08 61.6 72 44.4
C09p65820 Brassica napus HOM05D006351 ORTHO05D007796 3.2e-08 61.6 72 44.4
BolC9t59403H Brassica oleracea HOM05D006351 ORTHO05D007796 3.2e-08 61.6 72 44.4
BraA10t44723Z Brassica rapa HOM05D006351 ORTHO05D007796 3.2e-08 61.6 72 44.4
Duzib150G0289 Durio zibethinus HOM05D006351 ORTHO05D007796 5.5e-08 60.8 66 45.5
Cfa013099 Carpinus fangiana HOM05D006351 ORTHO05D007796 9.3e-08 60.1 66 51.5
MBI14_g15653_MAGBIO Magnolia biondii HOM05D006351 ORTHO05D007796 9.3e-08 60.1 66 43.9
MBI14_g30358_MAGBIO Magnolia biondii HOM05D006351 ORTHO05D007796 9.3e-08 60.1 66 43.9
Eucgr.C01685 Eucalyptus grandis HOM05D006351 ORTHO05D007796 1.2e-07 59.7 74 45.9
QL02p020121 Quercus lobata HOM05D006351 ORTHO05D007796 1.2e-07 59.7 71 46.5
Ciclev10007789m.g Citrus clementina HOM05D006351 ORTHO05D007796 1.6e-07 59.3 66 47.0
Gohir.A07G030500 Gossypium hirsutum HOM05D006351 ORTHO05D007796 2.1e-07 58.9 65 44.6
Gorai.001G036000 Gossypium raimondii HOM05D006351 ORTHO05D007796 2.1e-07 58.9 65 44.6
Potri.006G259600 Populus trichocarpa HOM05D006351 ORTHO05D007796 3.5e-07 58.2 66 51.5
Manes.03G011600 Manihot esculenta HOM05D006351 ORTHO05D007796 6.1e-07 57.4 66 45.5
TWI34G1294 Tripterygium wilfordii HOM05D006351 ORTHO05D007796 6.1e-07 57.4 72 48.6
Thhalv10013026m.g Eutrema salsugineum HOM05D006351 ORTHO05D007796 7.9e-07 57.0 66 42.4
Sc06g0000450 Simmondsia chinensis HOM05D006351 ORTHO05D007796 7.9e-07 57.0 66 47.0
Gohir.D07G034400 Gossypium hirsutum HOM05D006351 ORTHO05D007796 1.0e-06 56.6 65 43.1
THA.LOC104815006 Tarenaya hassleriana HOM05D006351 ORTHO05D007796 1.0e-06 56.6 66 43.9
Medtr1g012290 Medicago truncatula HOM05D006351 ORTHO05D007796 2.3e-06 55.5 30 83.3
Sp6g32460 Schrenkiella parvula HOM05D006351 ORTHO05D007796 2.3e-06 55.5 71 39.4
MSTRG.9683 Avicennia marina HOM05D006351 ORTHO05D007796 3.0e-06 55.1 66 39.4
Lj8A733T33 Lonicera japonica HOM05D006351 ORTHO05D007796 3.0e-06 55.1 66 42.4
CiPaw.08G008200 Carya illinoinensis HOM05D006351 ORTHO05D007796 3.9e-06 54.7 66 47.0
Nn8g39723 Nelumbo nucifera HOM05D006351 ORTHO05D007796 5.1e-06 54.3 66 43.9
CSS0041020 Camellia sinensis var. sinensis HOM05D006351 ORTHO05D007796 8.7e-06 53.5 66 43.9


User provided reference genes

Program Settings