Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g012950 Medicago truncatula HOM05D013068 ORTHO05D003125 1.2e-88 329.7 161 100.0
TPR.G38870 Trifolium pratense HOM05D013068 ORTHO05D003125 1.5e-57 226.5 167 74.3
Lj5g0018030 Lotus japonicus HOM05D013068 ORTHO05D003125 1.6e-43 179.9 170 62.4
Glyma.14G112500 Glycine max HOM05D003969 ORTHO05D003125 5.3e-39 164.9 165 60.0
Lalb_Chr22g0361461 Lupinus albus HOM05D013068 ORTHO05D003125 3.9e-34 148.7 164 54.9
VMungo0647G1373 Vigna mungo HOM05D013068 ORTHO05D003125 1.5e-33 146.7 144 63.2
Phvul.001G047400 Phaseolus vulgaris HOM05D013068 ORTHO05D003125 1.9e-33 146.4 155 60.0
Glyma.17G215400 Glycine max HOM05D013068 ORTHO05D003125 7.4e-33 144.4 166 57.2
arahy.Tifrunner.gnm1.ann1.NDRC00 Arachis hypogaea HOM05D013068 ORTHO05D003125 5.1e-26 121.7 177 49.7
arahy.Tifrunner.gnm1.ann1.75VKL2 Arachis hypogaea HOM05D013068 ORTHO05D003125 1.9e-25 119.8 177 49.2
Lalb_Chr24g0402081 Lupinus albus HOM05D013068 ORTHO05D003125 5.9e-22 108.2 141 48.2
QL02p020337 Quercus lobata HOM05D008824 ORTHO05D003125 3.8e-13 79.0 152 35.5
EL10Ac8g18819 Beta vulgaris HOM05D003969 ORTHO05D003125 6.5e-13 78.2 191 33.5
HanXRQChr05g0141561 Helianthus annuus HOM05D003969 ORTHO05D003125 3.2e-12 75.9 147 38.1
CiPaw.07G226900 Carya illinoinensis HOM05D003969 ORTHO05D003125 1.0e-10 70.9 159 36.5
Atru.chr7.2498 Acer truncatum HOM05D003969 ORTHO05D003125 1.4e-10 70.5 156 37.8
FAN19G0689 Fragaria x ananassa HOM05D003969 ORTHO05D003125 3.9e-10 68.9 144 34.7
AUR62011257 Chenopodium quinoa HOM05D003969 ORTHO05D003125 1.5e-09 67.0 157 35.0
FAN26G0199 Fragaria x ananassa HOM05D003969 ORTHO05D003125 2.6e-09 66.2 151 33.1
AL7G43940 Arabidopsis lyrata HOM05D003969 ORTHO05D003125 3.3e-09 65.9 157 33.8
FAN23G1308 Fragaria x ananassa HOM05D003969 ORTHO05D003125 3.3e-09 65.9 145 34.5
FAN28G0460 Fragaria x ananassa HOM05D003969 ORTHO05D003125 5.7e-09 65.1 145 34.5
RcHm_v2.0_Chr2g0086701 Rosa chinensis HOM05D003969 ORTHO05D003125 7.4e-09 64.7 164 34.8
Lsat_1_v5_gn_8_63081 Lactuca sativa HOM05D003969 ORTHO05D003125 9.7e-09 64.3 148 35.1
Prupe.7G255000 Prunus persica HOM05D003969 ORTHO05D003125 1.3e-08 63.9 172 35.5
Carub.0007s3088 Capsella rubella HOM05D003969 ORTHO05D003125 1.7e-08 63.5 158 35.4
Cfa013102 Carpinus fangiana HOM05D003969 ORTHO05D003125 2.2e-08 63.2 133 38.3
ECA236G4020 Erigeron canadensis HOM05D003969 ORTHO05D003125 2.2e-08 63.2 150 34.7
CSS0007982 Camellia sinensis var. sinensis HOM05D003969 ORTHO05D003125 3.7e-08 62.4 124 38.7
AUR62041449 Chenopodium quinoa HOM05D003969 ORTHO05D003125 4.8e-08 62.0 145 35.9
Cc06_g07430 Coffea canephora HOM05D003969 ORTHO05D003125 4.8e-08 62.0 146 36.3
Potri.006G259200 Populus trichocarpa HOM05D008824 ORTHO05D003125 4.8e-08 62.0 135 35.6
Thecc.09G019700 Theobroma cacao HOM05D003969 ORTHO05D003125 4.8e-08 62.0 155 33.5
arahy.Tifrunner.gnm1.ann1.8XJ8NX Arachis hypogaea HOM05D013068 ORTHO05D003125 6.3e-08 61.6 47 66.0
ClCG05G016610 Citrullus lanatus HOM05D003969 ORTHO05D003125 8.2e-08 61.2 136 39.0
CiPaw.15G182600 Carya illinoinensis HOM05D003969 ORTHO05D003125 1.1e-07 60.8 136 36.0
AT5G35090 Arabidopsis thaliana HOM05D003969 ORTHO05D003125 1.4e-07 60.5 155 34.8
Gohir.D05G012200 Gossypium hirsutum HOM05D003969 ORTHO05D003125 1.8e-07 60.1 156 35.9
Manes.16G125900 Manihot esculenta HOM05D008824 ORTHO05D003125 1.8e-07 60.1 131 33.6
Nitab4.5_0010572g0020 Nicotiana tabacum HOM05D003969 ORTHO05D003125 1.8e-07 60.1 102 43.1
Sopen08g011970 Solanum pennellii HOM05D003969 ORTHO05D003125 2.4e-07 59.7 89 47.2
THA.LOC104815394 Tarenaya hassleriana HOM05D003969 ORTHO05D003125 3.1e-07 59.3 158 33.5
CANSAT11G0887 Cannabis sativa HOM05D003969 ORTHO05D003125 4.1e-07 58.9 142 37.3
Migut.A00008 Erythranthe guttata HOM05D003969 ORTHO05D003125 4.1e-07 58.9 108 38.0
arahy.Tifrunner.gnm1.ann1.H8K6JA Arachis hypogaea HOM05D013068 ORTHO05D003125 5.3e-07 58.5 129 38.8
Dinv15887 Davidia involucrata HOM05D003969 ORTHO05D003125 5.3e-07 58.5 87 43.7
MSTRG.26029 Avicennia marina HOM05D003969 ORTHO05D003125 7.0e-07 58.2 84 41.7
TWI34G1911 Tripterygium wilfordii HOM05D003969 ORTHO05D003125 7.0e-07 58.2 147 35.4
Sed0009487 Sechium edule HOM05D003969 ORTHO05D003125 9.1e-07 57.8 56 53.6
Dinv41425 Davidia involucrata HOM05D003969 ORTHO05D003125 1.2e-06 57.4 57 54.4
COL.COLO4_24105 Corchorus olitorius HOM05D003969 ORTHO05D003125 1.6e-06 57.0 118 36.4
Dinv11721 Davidia involucrata HOM05D003969 ORTHO05D003125 1.6e-06 57.0 85 43.5
Nitab4.5_0002992g0060 Nicotiana tabacum HOM05D003969 ORTHO05D003125 1.6e-06 57.0 92 43.5
CiPaw.15G182500 Carya illinoinensis HOM05D003969 ORTHO05D003125 2.0e-06 56.6 137 36.5
Nn2g12243 Nelumbo nucifera HOM05D003969 ORTHO05D003125 2.0e-06 56.6 150 32.0
Sc08g0005750 Simmondsia chinensis HOM05D003969 ORTHO05D003125 2.0e-06 56.6 132 29.5
CARHR217160 Cardamine hirsuta HOM05D003969 ORTHO05D003125 2.6e-06 56.2 152 34.2
Haze_21463 Corylus avellana HOM05D008824 ORTHO05D003125 2.6e-06 56.2 131 36.6
Nn8g39714 Nelumbo nucifera HOM05D003969 ORTHO05D003125 2.6e-06 56.2 169 30.8
Oeu057292.1 Olea europaea HOM05D003969 ORTHO05D003125 2.6e-06 56.2 150 33.3
BcaB04g18063 Brassica carinata HOM05D003969 ORTHO05D003125 3.5e-06 55.8 138 35.5
Peaxi162Scf00315g00011 Petunia axillaris HOM05D003969 ORTHO05D003125 3.5e-06 55.8 90 42.2
Thhalv10005689m.g Eutrema salsugineum HOM05D003969 ORTHO05D003125 4.5e-06 55.5 157 33.1
Gohir.A07G030200 Gossypium hirsutum HOM05D003969 ORTHO05D003125 5.9e-06 55.1 77 45.5
BcaC07g37678 Brassica carinata HOM05D003969 ORTHO05D003125 7.7e-06 54.7 101 39.6
BolC8t48050H Brassica oleracea HOM05D003969 ORTHO05D003125 7.7e-06 54.7 101 39.6
Hma1.2p1_0182F.1_g080470 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 7.7e-06 54.7 177 30.5
Hma1.2p1_0228F.1_g096590 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 7.7e-06 54.7 115 41.7
Hma1.2p1_2744F.1_g327795 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 7.7e-06 54.7 177 30.5
Rhsim02G0205800 Rhododendron simsii HOM05D003969 ORTHO05D003125 7.7e-06 54.7 109 39.4


User provided reference genes

Program Settings