Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g011320 Medicago truncatula HOM05D002090 ORTHO05D001923 1.5e-177 625.9 298 100.0
Medtr6g464080 Medicago truncatula HOM05D002090 ORTHO05D001923 8.2e-78 294.7 164 84.1
Medtr8g076570 Medicago truncatula HOM05D002790 ORTHO05D003033 5.3e-61 238.8 166 68.7
Medtr2g060880 Medicago truncatula HOM05D002090 ORTHO05D001923 6.7e-56 221.9 315 41.9
TPR.G15265 Trifolium pratense HOM05D002090 ORTHO05D001923 1.5e-47 194.1 272 37.5
Medtr8g469790 Medicago truncatula HOM05D000014 ORTHO05D000016 2.4e-45 186.8 249 45.4
TPR.G15173 Trifolium pratense HOM05D002090 ORTHO05D001923 2.0e-44 183.7 158 49.4
TPR.G26860 Trifolium pratense HOM05D002090 ORTHO05D001923 8.5e-43 178.3 262 35.1
Medtr6g011130 Medicago truncatula HOM05D011098 ORTHO05D001923 1.6e-36 157.5 119 61.3
Medtr3g117130 Medicago truncatula HOM05D011098 ORTHO05D001923 3.0e-32 143.3 111 60.4
Medtr3g436230 Medicago truncatula HOM05D011098 ORTHO05D001923 9.8e-31 138.3 105 60.0
Psat5g061840 Pisum sativum HOM05D002090 ORTHO05D001923 1.3e-27 127.9 160 37.5
Medtr4g054090 Medicago truncatula HOM05D011098 ORTHO05D001923 2.3e-27 127.1 214 39.3
Psat1g078880 Pisum sativum HOM05D002090 ORTHO05D001923 8.0e-25 118.6 134 39.6
Medtr5g044110 Medicago truncatula HOM05D011098 ORTHO05D001923 2.3e-24 117.1 104 52.9
Psat1g093760 Pisum sativum HOM05D002090 ORTHO05D001923 2.3e-24 117.1 157 36.9
Medtr0010s0110 Medicago truncatula HOM05D011098 ORTHO05D001923 2.6e-23 113.6 90 58.9
Glyma.02G178600 Glycine max HOM05D002090 ORTHO05D001923 1.7e-22 110.9 167 37.1
TPR.G2805 Trifolium pratense HOM05D002090 ORTHO05D001923 1.7e-22 110.9 160 36.2
TPR.G31936 Trifolium pratense HOM05D002090 ORTHO05D001923 1.7e-22 110.9 160 36.9
Glyma.19G107800 Glycine max HOM05D002090 ORTHO05D001923 2.9e-22 110.2 165 37.0
Glyma.01G071100 Glycine max HOM05D002090 ORTHO05D001923 1.9e-21 107.5 173 34.1
Glyma.13G075500 Glycine max HOM05D002090 ORTHO05D001923 2.4e-21 107.1 162 37.0
Glyma.13G025000 Glycine max HOM05D002090 ORTHO05D001923 7.0e-21 105.5 165 35.8
Medtr6g045290 Medicago truncatula HOM05D000336 ORTHO05D002705 2.0e-20 104.0 170 31.2
Medtr1g043690 Medicago truncatula HOM05D002090 ORTHO05D001923 3.5e-20 103.2 193 30.6
Glyma.03G056600 Glycine max HOM05D002090 ORTHO05D001923 6.0e-20 102.4 165 34.5
Lalb_Chr11g0064711 Lupinus albus HOM05D002090 ORTHO05D001923 6.0e-20 102.4 237 28.3
Medtr3g112110 Medicago truncatula HOM05D011098 ORTHO05D001923 6.0e-20 102.4 128 42.2
Psat5g054720 Pisum sativum HOM05D002090 ORTHO05D001923 7.8e-20 102.1 144 36.1
Psat4g042560 Pisum sativum HOM05D002090 ORTHO05D001923 1.7e-19 100.9 121 34.7
Medtr5g004860 Medicago truncatula HOM05D002090 ORTHO05D001923 2.3e-19 100.5 165 32.1
Glyma.03G121900 Glycine max HOM05D002090 ORTHO05D001923 3.9e-19 99.8 144 35.4
Glyma.08G253400 Glycine max HOM05D002090 ORTHO05D001923 8.6e-19 98.6 144 35.4
Glyma.04G181700 Glycine max HOM05D002090 ORTHO05D001923 2.5e-18 97.1 144 34.0
Glyma.09G106000 Glycine max HOM05D002090 ORTHO05D001923 2.5e-18 97.1 165 33.3
Lalb_Chr14g0362191 Lupinus albus HOM05D002090 ORTHO05D001923 2.5e-18 97.1 160 30.6
Psat1g003680 Pisum sativum HOM05D002090 ORTHO05D001923 2.5e-18 97.1 221 26.7
Glyma.20G065700 Glycine max HOM05D002090 ORTHO05D001923 5.6e-18 95.9 181 34.3
Medtr3g055660 Medicago truncatula HOM05D002090 ORTHO05D001923 5.6e-18 95.9 188 29.3
Glyma.11G178600 Glycine max HOM05D002090 ORTHO05D001923 9.5e-18 95.1 200 29.5
Medtr4g014890 Medicago truncatula HOM05D002090 ORTHO05D001923 9.5e-18 95.1 188 29.3
Lalb_Chr11g0063921 Lupinus albus HOM05D002090 ORTHO05D001923 1.6e-17 94.4 160 31.9
Lalb_Chr15g0080831 Lupinus albus HOM05D002090 ORTHO05D001923 1.6e-17 94.4 160 31.9
Lalb_Chr24g0395611 Lupinus albus HOM05D002090 ORTHO05D001923 1.6e-17 94.4 160 31.9
Lalb_Chr25g0279801 Lupinus albus HOM05D002090 ORTHO05D001923 1.6e-17 94.4 160 31.9
Lalb_Chr25g0284421 Lupinus albus HOM05D002090 ORTHO05D001923 1.6e-17 94.4 160 31.9
Medtr2g450060 Medicago truncatula HOM05D002090 ORTHO05D001923 1.6e-17 94.4 165 33.9
Medtr4g070160 Medicago truncatula HOM05D002090 ORTHO05D001923 1.6e-17 94.4 147 34.0
Lalb_Chr03g0030491 Lupinus albus HOM05D002090 ORTHO05D001923 2.1e-17 94.0 160 31.9
Lalb_Chr07g0195661 Lupinus albus HOM05D002090 ORTHO05D001923 2.8e-17 93.6 160 31.9
Glyma.13G029300 Glycine max HOM05D002090 ORTHO05D001923 3.6e-17 93.2 144 32.6
Glyma.15G206600 Glycine max HOM05D002090 ORTHO05D001923 4.7e-17 92.8 159 33.3
Medtr7g025160 Medicago truncatula HOM05D002090 ORTHO05D001923 4.7e-17 92.8 175 32.0
TPR.G15973 Trifolium pratense HOM05D001685 ORTHO05D007488 4.7e-17 92.8 230 26.1
Glyma.03G083300 Glycine max HOM05D002090 ORTHO05D001923 6.2e-17 92.4 171 32.2
Lalb_Chr01g0020731 Lupinus albus HOM05D002090 ORTHO05D001923 6.2e-17 92.4 160 31.2
Lalb_Chr10g0095211 Lupinus albus HOM05D002090 ORTHO05D001923 6.2e-17 92.4 160 31.2
Lalb_Chr14g0376091 Lupinus albus HOM05D002090 ORTHO05D001923 6.2e-17 92.4 160 31.2
Medtr6g055250 Medicago truncatula HOM05D002090 ORTHO05D001923 6.2e-17 92.4 197 28.9
Medtr6g059860 Medicago truncatula HOM05D002090 ORTHO05D001923 6.2e-17 92.4 188 29.3
Lalb_Chr12g0196331 Lupinus albus HOM05D002090 ORTHO05D001923 1.1e-16 91.7 160 30.6
Lalb_Chr16g0381501 Lupinus albus HOM05D002090 ORTHO05D001923 1.1e-16 91.7 160 30.6
Lalb_Chr20g0117751 Lupinus albus HOM05D002090 ORTHO05D001923 1.1e-16 91.7 160 30.6
Lalb_Chr23g0269621 Lupinus albus HOM05D002090 ORTHO05D001923 1.1e-16 91.7 160 30.6
Medtr4g073560 Medicago truncatula HOM05D000049 ORTHO05D001923 1.1e-16 91.7 57 71.9
Glyma.07G214000 Glycine max HOM05D002090 ORTHO05D001923 1.4e-16 91.3 171 31.6
Lalb_Chr13g0293801 Lupinus albus HOM05D002090 ORTHO05D001923 1.8e-16 90.9 145 29.7
Lalb_Chr25g0281591 Lupinus albus HOM05D002090 ORTHO05D001923 5.2e-16 89.4 171 27.5
Lalb_Chr15g0085801 Lupinus albus HOM05D002090 ORTHO05D001923 8.9e-16 88.6 169 30.8
TPR.G824 Trifolium pratense HOM05D002090 ORTHO05D001923 1.5e-15 87.8 164 34.8
Glyma.18G301950 Glycine max HOM05D002090 ORTHO05D001923 3.4e-15 86.7 155 32.3
VMungo0540G0980 Vigna mungo HOM05D002090 ORTHO05D001923 3.4e-15 86.7 164 31.1
Medtr0003s0290 Medicago truncatula HOM05D002090 ORTHO05D001923 4.4e-15 86.3 126 32.5
Lalb_Chr24g0399451 Lupinus albus HOM05D002090 ORTHO05D001923 5.8e-15 85.9 169 30.2
Medtr2g055290 Medicago truncatula HOM05D002090 ORTHO05D001923 7.5e-15 85.5 163 31.3
TPR.G34836 Trifolium pratense HOM05D000096 ORTHO05D000045 7.5e-15 85.5 153 30.7
Glyma.16G116866 Glycine max HOM05D002090 ORTHO05D001923 9.8e-15 85.1 162 32.1
Psat1g120640 Pisum sativum HOM05D002090 ORTHO05D015180 2.2e-14 84.0 160 29.4
Glyma.18G142200 Glycine max HOM05D002090 ORTHO05D001923 4.9e-14 82.8 163 30.7
Medtr4g085760 Medicago truncatula HOM05D002090 ORTHO05D001923 1.1e-13 81.6 165 29.1
Medtr8g027910 Medicago truncatula HOM05D002090 ORTHO05D001923 1.1e-13 81.6 175 30.3
Lalb_Chr09g0332511 Lupinus albus HOM05D002090 ORTHO05D001923 4.1e-13 79.7 169 28.4
Lalb_Chr25g0280991 Lupinus albus HOM05D002090 ORTHO05D001923 5.4e-13 79.3 133 29.3
Medtr8g107180 Medicago truncatula HOM05D011098 ORTHO05D001923 5.4e-13 79.3 90 48.9
Glyma.07G223800 Glycine max HOM05D002090 ORTHO05D001923 7.1e-13 79.0 163 30.7
Medtr7g052740 Medicago truncatula HOM05D002090 ORTHO05D001923 1.2e-12 78.2 186 29.0
Psat6g155560 Pisum sativum HOM05D002090 ORTHO05D001923 1.6e-12 77.8 77 40.3
Medtr6g088820 Medicago truncatula HOM05D011098 ORTHO05D001923 2.1e-12 77.4 56 64.3
Glyma.09G080300 Glycine max HOM05D002090 ORTHO05D001923 3.5e-12 76.6 147 29.9
Glyma.09G101732 Glycine max HOM05D002090 ORTHO05D001923 4.6e-12 76.3 118 36.4
Glyma.20G053800 Glycine max HOM05D002090 ORTHO05D001923 6.0e-12 75.9 203 29.1
Medtr1g052715 Medicago truncatula HOM05D008036 ORTHO05D000174 7.8e-12 75.5 153 31.4
Psat0s3648g0040 Pisum sativum HOM05D002090 ORTHO05D001923 7.8e-12 75.5 139 27.3
Glyma.10G108100 Glycine max HOM05D002090 ORTHO05D001923 2.3e-11 73.9 106 37.7
Psat6g082280 Pisum sativum HOM05D002090 ORTHO05D001923 2.3e-11 73.9 149 28.2
Psat1g115320 Pisum sativum HOM05D002090 ORTHO05D001923 3.9e-11 73.2 126 31.0
Lalb_Chr11g0072891 Lupinus albus HOM05D002090 ORTHO05D001923 5.1e-11 72.8 115 33.9
Medtr8g069780 Medicago truncatula HOM05D011098 ORTHO05D013895 1.1e-10 71.6 56 58.9
Psat0s1478g0200 Pisum sativum HOM05D002090 ORTHO05D001923 1.9e-10 70.9 144 31.9
Lalb_Chr02g0157101 Lupinus albus HOM05D002090 ORTHO05D001923 2.5e-10 70.5 110 35.5
Lalb_Chr09g0334041 Lupinus albus HOM05D002090 ORTHO05D001923 2.5e-10 70.5 110 35.5
Glyma.20G034801 Glycine max HOM05D002090 ORTHO05D001923 3.3e-10 70.1 89 42.7
Lalb_Chr11g0068191 Lupinus albus HOM05D002090 ORTHO05D001923 3.3e-10 70.1 100 36.0
Glyma.15G235800 Glycine max HOM05D002090 ORTHO05D001923 4.3e-10 69.7 169 29.0
Glyma.13G028600 Glycine max HOM05D002090 ORTHO05D001923 5.6e-10 69.3 163 28.2
HanXRQChr06g0179651 Helianthus annuus HOM05D003964 ORTHO05D000174 9.5e-10 68.6 159 23.3
HanXRQChr06g0179661 Helianthus annuus HOM05D003964 ORTHO05D000174 9.5e-10 68.6 159 23.3
HanXRQChr08g0230241 Helianthus annuus HOM05D003964 ORTHO05D000174 9.5e-10 68.6 159 23.3
Medtr7g450880 Medicago truncatula HOM05D002090 ORTHO05D001923 2.1e-09 67.4 96 33.3
Lalb_Chr25g0282801 Lupinus albus HOM05D002090 ORTHO05D001923 6.2e-09 65.9 89 36.0
SGA_v2.0_scaffold21G09448 Striga asiatica HOM05D000353 ORTHO05D000174 6.2e-09 65.9 237 26.2
HanXRQChr17g0566701 Helianthus annuus HOM05D003964 ORTHO05D000174 8.1e-09 65.5 156 23.1
Lalb_Chr06g0171211 Lupinus albus HOM05D002090 ORTHO05D001923 8.1e-09 65.5 106 34.0
Medtr2g021620 Medicago truncatula HOM05D040056 ORTHO05D025862 8.1e-09 65.5 122 32.8
Medtr5g041170 Medicago truncatula HOM05D002090 ORTHO05D001923 8.1e-09 65.5 91 31.9
Lj3g0021994 Lotus japonicus HOM05D002090 ORTHO05D001923 1.1e-08 65.1 240 23.3
Glyma.10G114800 Glycine max HOM05D002090 ORTHO05D001923 3.1e-08 63.5 83 39.8
Lalb_Chr20g0115961 Lupinus albus HOM05D002090 ORTHO05D001923 4.0e-08 63.2 96 31.2
Psat4g071480 Pisum sativum HOM05D002090 ORTHO05D001923 4.0e-08 63.2 76 36.8
ECA246G4325 Erigeron canadensis HOM05D000353 ORTHO05D000174 5.2e-08 62.8 162 29.0
Glyma.02G181950 Glycine max HOM05D002090 ORTHO05D001923 5.2e-08 62.8 72 44.4
TPR.G39996 Trifolium pratense HOM05D002090 ORTHO05D001923 8.9e-08 62.0 102 33.3
BcaB05g23783 Brassica carinata HOM05D000353 ORTHO05D000174 2.0e-07 60.8 189 27.0
Glyma.05G084900 Glycine max HOM05D002090 ORTHO05D001923 2.0e-07 60.8 89 39.3
Lalb_Chr11g0070891 Lupinus albus HOM05D002090 ORTHO05D001923 2.6e-07 60.5 89 38.2
BcaC03g18358 Brassica carinata HOM05D000353 ORTHO05D000174 3.4e-07 60.1 140 26.4
Lalb_Chr11g0072591 Lupinus albus HOM05D002090 ORTHO05D001923 3.4e-07 60.1 88 38.6
Glyma.19G023800 Glycine max HOM05D002090 ORTHO05D001923 4.4e-07 59.7 90 36.7
Lalb_Chr09g0332121 Lupinus albus HOM05D002090 ORTHO05D001923 7.6e-07 58.9 89 34.8
Glyma.19G045050 Glycine max HOM05D002090 ORTHO05D001923 9.9e-07 58.5 88 37.5
HanXRQChr13g0387501 Helianthus annuus HOM05D003964 ORTHO05D000174 1.3e-06 58.2 143 26.6
Medtr6g033945 Medicago truncatula HOM05D040056 ORTHO05D025862 1.3e-06 58.2 46 56.5
Lalb_Chr20g0117411 Lupinus albus HOM05D002090 ORTHO05D001923 2.9e-06 57.0 70 37.1
Glyma.02G161500 Glycine max HOM05D002090 ORTHO05D001923 3.8e-06 56.6 111 33.3
Lalb_Chr09g0332281 Lupinus albus HOM05D002090 ORTHO05D001923 3.8e-06 56.6 79 36.7
Lalb_Chr07g0192401 Lupinus albus HOM05D002090 ORTHO05D001923 4.9e-06 56.2 66 39.4
Psat6g240360 Pisum sativum HOM05D002090 ORTHO05D001923 4.9e-06 56.2 80 32.5
Medtr1g092990 Medicago truncatula HOM05D000096 ORTHO05D000045 6.4e-06 55.8 82 35.4


User provided reference genes

Program Settings