Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g009980 Medicago truncatula HOM05D006422 ORTHO05D007992 6.2e-129 464.2 235 100.0
Ca_12880_v3 Cicer arietinum L. HOM05D006422 ORTHO05D007992 6.2e-113 411.0 233 89.7
TPR.G11997 Trifolium pratense HOM05D006422 ORTHO05D007992 7.6e-111 404.1 233 88.4
Psat6g032000 Pisum sativum HOM05D006422 ORTHO05D007992 2.9e-110 402.1 233 86.3
Lj5g0012981 Lotus japonicus HOM05D006422 ORTHO05D007992 4.4e-95 351.7 237 76.4
Phvul.001G058000 Phaseolus vulgaris HOM05D006422 ORTHO05D007992 7.6e-95 350.9 238 73.1
VMungo0647G2190 Vigna mungo HOM05D006422 ORTHO05D007992 2.2e-94 349.4 238 73.1
Lalb_Chr14g0362181 Lupinus albus HOM05D006422 ORTHO05D007992 1.6e-89 333.2 191 82.7
arahy.Tifrunner.gnm1.ann1.43EIBT Arachis hypogaea HOM05D006422 ORTHO05D007992 4.5e-87 325.1 238 68.9
Cfa013253 Carpinus fangiana HOM05D006422 ORTHO05D007992 1.3e-86 323.6 231 69.3
arahy.Tifrunner.gnm1.ann1.D9GJPD Arachis hypogaea HOM05D006422 ORTHO05D007992 1.7e-86 323.2 238 68.5
Ciclev10009324m.g Citrus clementina HOM05D006422 ORTHO05D007992 1.0e-83 313.9 235 68.9
Thecc.09G005200 Theobroma cacao HOM05D006422 ORTHO05D007992 1.9e-82 309.7 208 71.2
Glyma.17G201600 Glycine max HOM05D006422 ORTHO05D007992 3.7e-81 305.4 224 72.3
GSVIVG01035544001 Vitis vinifera HOM05D006422 ORTHO05D007992 3.7e-81 305.4 210 71.4
PGR042G1463 Punica granatum HOM05D006422 ORTHO05D007992 6.2e-81 304.7 234 65.4
CANSAT25G0758 Cannabis sativa HOM05D006422 ORTHO05D007992 5.3e-80 301.6 239 64.9
CiPaw.07G214400 Carya illinoinensis HOM05D006422 ORTHO05D007992 1.5e-79 300.1 242 63.2
Dinv10868 Davidia involucrata HOM05D006422 ORTHO05D007992 2.6e-79 299.3 213 71.4
Dinv26550 Davidia involucrata HOM05D006422 ORTHO05D007992 2.6e-79 299.3 213 71.4
Duzib168G1765 Durio zibethinus HOM05D006422 ORTHO05D007992 2.6e-79 299.3 231 62.8
QL12p024696 Quercus lobata HOM05D006422 ORTHO05D007992 3.4e-79 298.9 196 74.5
Sabra06G0214100 Salix brachista HOM05D006422 ORTHO05D007992 4.5e-79 298.5 214 70.6
Thhalv10014537m.g Eutrema salsugineum HOM05D006422 ORTHO05D007992 1.3e-78 297.0 236 62.3
BcaB01g04822 Brassica carinata HOM05D006422 ORTHO05D007992 2.9e-78 295.8 234 63.2
C03p11290 Brassica napus HOM05D006422 ORTHO05D007992 2.9e-78 295.8 234 63.2
A03p09710 Brassica napus HOM05D006422 ORTHO05D007992 4.9e-78 295.0 233 62.7
BolC3t13599H Brassica oleracea HOM05D006422 ORTHO05D007992 4.9e-78 295.0 233 62.2
BraA03t10287Z Brassica rapa HOM05D006422 ORTHO05D007992 4.9e-78 295.0 233 62.7
THA.LOC104811048 Tarenaya hassleriana HOM05D006422 ORTHO05D007992 4.9e-78 295.0 237 61.6
BcaB01g04848 Brassica carinata HOM05D006422 ORTHO05D007992 6.5e-78 294.7 237 62.0
RcHm_v2.0_Chr6g0312201 Rosa chinensis HOM05D006422 ORTHO05D007992 6.5e-78 294.7 195 69.2
Manes.16G136400 Manihot esculenta HOM05D006422 ORTHO05D007992 8.4e-78 294.3 209 70.3
Atru.chr7.2615_Atru.chr7.2616 Acer truncatum HOM05D006422 ORTHO05D007992 1.1e-77 293.9 236 65.7
FvH4_2g30680 Fragaria vesca HOM05D006422 ORTHO05D007992 1.1e-77 293.9 231 61.5
BcaC04g19400 Brassica carinata HOM05D006422 ORTHO05D007992 1.9e-77 293.1 237 62.4
C09p56110 Brassica napus HOM05D006422 ORTHO05D007992 1.9e-77 293.1 237 62.4
BolC9t58478H Brassica oleracea HOM05D006422 ORTHO05D007992 1.9e-77 293.1 237 62.4
FAN24G2382 Fragaria x ananassa HOM05D006422 ORTHO05D007992 1.9e-77 293.1 231 61.5
CARHR192910 Cardamine hirsuta HOM05D006422 ORTHO05D007992 3.2e-77 292.4 236 60.2
Potri.006G276400 Populus trichocarpa HOM05D006422 ORTHO05D007992 3.2e-77 292.4 214 69.2
MD15G1109900 Malus domestica HOM05D006422 ORTHO05D007992 7.1e-77 291.2 194 70.1
BcaB08g36552 Brassica carinata HOM05D006422 ORTHO05D007992 9.3e-77 290.8 220 65.5
Eucgr.C02103 Eucalyptus grandis HOM05D006422 ORTHO05D007992 1.2e-76 290.4 208 69.7
AL6G31470 Arabidopsis lyrata HOM05D006422 ORTHO05D007992 2.1e-76 289.7 235 61.3
AT5G19940 Arabidopsis thaliana HOM05D006422 ORTHO05D007992 2.1e-76 289.7 240 61.2
Nn1g01726 Nelumbo nucifera HOM05D006422 ORTHO05D007992 2.1e-76 289.7 208 69.7
Sp6g24440 Schrenkiella parvula HOM05D006422 ORTHO05D007992 2.1e-76 289.7 237 62.4
PSO170G4757 Papaver somniferum HOM05D006422 ORTHO05D007992 3.5e-76 288.9 209 70.8
Prupe.1G462100 Prunus persica HOM05D006422 ORTHO05D007992 3.5e-76 288.9 232 62.9
COL.COLO4_18610 Corchorus olitorius HOM05D006422 ORTHO05D007992 4.6e-76 288.5 220 64.5
PGSC0003DMG400009533 Solanum tuberosum HOM05D006422 ORTHO05D007992 6.0e-76 288.1 219 67.6
CAN.G1364.3 Capsicum annuum HOM05D006422 ORTHO05D007992 7.9e-76 287.7 207 70.5
FAN27G3442 Fragaria x ananassa HOM05D006422 ORTHO05D007992 7.9e-76 287.7 232 60.8
PSO017G3510 Papaver somniferum HOM05D006422 ORTHO05D007992 1.0e-75 287.3 209 70.8
A10p19790 Brassica napus HOM05D006422 ORTHO05D007992 1.3e-75 287.0 229 61.6
BraA10t44055Z Brassica rapa HOM05D006422 ORTHO05D007992 1.3e-75 287.0 229 61.6
Carub.0006s1831 Capsella rubella HOM05D006422 ORTHO05D007992 1.3e-75 287.0 235 60.4
AUR62020627 Chenopodium quinoa HOM05D006422 ORTHO05D007992 1.3e-75 287.0 231 64.5
TWI34G0909 Tripterygium wilfordii HOM05D006422 ORTHO05D007992 1.3e-75 287.0 207 71.0
Migut.A00443 Erythranthe guttata HOM05D006422 ORTHO05D007992 3.9e-75 285.4 236 60.6
Solyc08g006160.4 Solanum lycopersicum HOM05D006422 ORTHO05D007992 8.7e-75 284.3 198 71.2
Aa31LG9G9500 Aethionema arabicum HOM05D006422 ORTHO05D007992 1.1e-74 283.9 232 60.3
Sopen08g002130 Solanum pennellii HOM05D006422 ORTHO05D007992 1.9e-74 283.1 213 67.1
Cc04_g09430 Coffea canephora HOM05D006422 ORTHO05D007992 5.7e-74 281.6 229 62.4
Sc09g0007930 Simmondsia chinensis HOM05D006422 ORTHO05D007992 5.7e-74 281.6 195 68.2
Actinidia03579 Actinidia chinensis HOM05D006422 ORTHO05D007992 7.4e-74 281.2 188 71.8
MSTRG.11814 Avicennia marina HOM05D006422 ORTHO05D007992 7.4e-74 281.2 233 60.9
TAR383G0184 Trochodendron aralioides HOM05D006422 ORTHO05D007992 9.6e-74 280.8 233 61.4
Peaxi162Scf00045g01530 Petunia axillaris HOM05D006422 ORTHO05D007992 2.1e-73 279.6 208 69.2
Gohir.D06G108900 Gossypium hirsutum HOM05D006422 ORTHO05D007992 2.8e-73 279.3 187 72.2
Aqoxy5G03915 Aquilegia oxysepala HOM05D006422 ORTHO05D007992 3.7e-73 278.9 187 73.3
Gorai.010G123700 Gossypium raimondii HOM05D006422 ORTHO05D007992 6.3e-73 278.1 187 71.7
EL10Ac2g03719 Beta vulgaris HOM05D006422 ORTHO05D007992 1.4e-72 276.9 252 60.3
Hma1.2p1_0534F.1_g173720 Hydrangea macrophylla HOM05D006422 ORTHO05D007992 2.4e-72 276.2 187 72.7
Haze_21696 Corylus avellana HOM05D006422 ORTHO05D007992 9.0e-72 274.2 159 79.9
Gohir.A06G106700 Gossypium hirsutum HOM05D006422 ORTHO05D007992 3.4e-71 272.3 191 70.7
HPP92_004705 Vanilla planifolia HOM05D006422 ORTHO05D007992 1.0e-70 270.8 196 65.8
CDE04G2326 Ceratophyllum demersum HOM05D006422 ORTHO05D007992 1.3e-70 270.4 214 63.6
Lsat_1_v5_gn_5_61061 Lactuca sativa HOM05D006422 ORTHO05D007992 1.9e-69 266.5 226 59.3
AUR62038756 Chenopodium quinoa HOM05D006422 ORTHO05D007992 4.2e-69 265.4 162 76.5
DCAR_003025 Daucus carota HOM05D006422 ORTHO05D007992 4.2e-69 265.4 173 73.4
MBI13_g31531_MAGBIO Magnolia biondii HOM05D006422 ORTHO05D007992 5.5e-69 265.0 181 69.1
Nitab4.5_0000025g0080 Nicotiana tabacum HOM05D006422 ORTHO05D007992 5.5e-69 265.0 257 57.2
unitig_748.g7381 Utricularia gibba HOM05D006422 ORTHO05D007992 5.5e-69 265.0 234 59.4
HanXRQChr13g0412481 Helianthus annuus HOM05D006422 ORTHO05D007992 4.6e-68 261.9 211 61.6
Rhsim07G0170200 Rhododendron simsii HOM05D006422 ORTHO05D007992 4.6e-68 261.9 223 61.0
ATR0626G032 Amborella trichopoda HOM05D006422 ORTHO05D007992 2.3e-67 259.6 196 63.3
ClCG08G012780 Citrullus lanatus HOM05D006422 ORTHO05D007992 5.1e-67 258.5 241 58.9
FAN20G1184 Fragaria x ananassa HOM05D006422 ORTHO05D007992 3.3e-66 255.8 211 58.3
Nitab4.5_0003259g0070 Nicotiana tabacum HOM05D006422 ORTHO05D007992 1.6e-65 253.4 201 64.2
vmacro05107 Vaccinium macrocarpon HOM05D006422 ORTHO05D007992 2.4e-64 249.6 164 70.1
SGA_v2.0_scaffold27G11666 Striga asiatica HOM05D006422 ORTHO05D007992 1.5e-63 246.9 237 56.1
Zm00001eb071430 Zea mays HOM05D006422 ORTHO05D007992 1.5e-63 246.9 206 63.1
Os04g0607000 Oryza sativa ssp. japonica HOM05D006422 ORTHO05D007992 2.9e-62 242.7 199 62.3
FAN15G3645 Fragaria x ananassa HOM05D006422 ORTHO05D007992 5.5e-61 238.4 195 58.5
ECA240G0283 Erigeron canadensis HOM05D000069 ORTHO05D000060 9.4e-61 237.7 159 67.9
Oeu018400.2 Olea europaea HOM05D006422 ORTHO05D007992 1.2e-60 237.3 156 69.2
CiPaw.08G017800 Carya illinoinensis HOM05D006422 ORTHO05D007992 1.5e-58 230.3 231 57.1
SEGI_33970 Sequoiadendron giganteum HOM05D006422 ORTHO05D007992 1.5e-55 220.3 171 59.6
MELO3C011201.2 Cucumis melo HOM05D006422 ORTHO05D007992 3.6e-52 209.1 180 61.7
Lj7A749G60 Lonicera japonica HOM05D006422 ORTHO05D007992 6.7e-51 204.9 120 76.7
Pp3c13_4790 Physcomitrium patens HOM05D006422 ORTHO05D007992 5.7e-50 201.8 195 49.2
Ah.11g043920 Amaranthus hybridus HOM05D006422 ORTHO05D007992 1.8e-48 196.8 188 56.4
AagrBONN_evm.TU.Sc2ySwM_228.4709 Anthoceros agrestis HOM05D006422 ORTHO05D007992 5.3e-48 195.3 170 52.9
Hma1.2p1_0534F.1_g173730 Hydrangea macrophylla HOM05D006422 ORTHO05D007992 1.3e-46 190.7 129 73.6
SMO364G0843 Selaginella moellendorffii HOM05D006422 ORTHO05D007992 2.9e-46 189.5 163 55.2
Mapoly0021s0119 Marchantia polymorpha HOM05D006422 ORTHO05D007992 9.4e-45 184.5 208 46.2
CSS0034711 Camellia sinensis var. sinensis HOM05D006422 ORTHO05D007992 2.7e-44 183.0 135 65.9
CSS0017479 Camellia sinensis var. sinensis HOM05D006422 ORTHO05D007992 1.1e-42 177.6 124 67.7
Gorai.002G101300 Gossypium raimondii HOM05D006422 ORTHO05D007992 2.2e-38 163.3 109 71.6
CSS0035518 Camellia sinensis var. sinensis HOM05D006422 ORTHO05D007992 2.5e-29 133.3 109 57.8
CBR_g3792 Chara braunii HOM05D006422 ORTHO05D007992 4.7e-28 129.0 174 39.1
Oeu014126.1 Olea europaea HOM05D006422 ORTHO05D007992 3.7e-25 119.4 91 63.7
MCO15G093 Micromonas commoda HOM05D006422 ORTHO05D007992 8.0e-20 101.7 198 34.8
Cre12.g502250 Chlamydomonas reinhardtii HOM05D006422 ORTHO05D007992 3.0e-19 99.8 219 32.0
Cre07.g325736 Chlamydomonas reinhardtii HOM05D006422 ORTHO05D007992 9.8e-18 94.7 168 31.0
PRCOL_00004658 Prasinoderma coloniale HOM05D006422 ORTHO05D007992 9.8e-18 94.7 200 33.5
Hund19396 Selenicereus undatus HOM05D006422 ORTHO05D007992 1.2e-15 87.8 84 56.0
CDE02G1133 Ceratophyllum demersum HOM05D003483 ORTHO05D004101 9.2e-08 61.6 254 26.0
Solyc11g005340.3 Solanum lycopersicum HOM05D005663 ORTHO05D007258 1.3e-06 57.8 239 23.0
Zm00001eb054390 Zea mays HOM05D003483 ORTHO05D004101 1.7e-06 57.4 179 26.3
PSO017G4111 Papaver somniferum HOM05D003483 ORTHO05D004101 2.3e-06 57.0 251 23.9
Cc02_g22350 Coffea canephora HOM05D003483 ORTHO05D004101 3.0e-06 56.6 194 27.3
Potri.003G020700 Populus trichocarpa HOM05D003483 ORTHO05D004101 3.0e-06 56.6 186 26.9


User provided reference genes

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