Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g009780 Medicago truncatula HOM05D004771 ORTHO05D005565 7.9e-93 344.0 201 100.0
TPR.G31901 Trifolium pratense HOM05D004771 ORTHO05D005565 2.0e-59 233.0 205 68.3
Psat6g007560 Pisum sativum HOM05D004771 ORTHO05D005565 2.8e-58 229.2 205 71.2
TPR.G12006 Trifolium pratense HOM05D004771 ORTHO05D005565 2.9e-55 219.2 217 64.1
Glyma.20G137100 Glycine max HOM05D004771 ORTHO05D005565 1.9e-54 216.5 205 69.8
Lj6g0021608 Lotus japonicus HOM05D004771 ORTHO05D005565 1.2e-53 213.8 205 62.9
Ca_12871_v3 Cicer arietinum L. HOM05D004771 ORTHO05D005565 1.6e-53 213.4 183 72.7
arahy.Tifrunner.gnm1.ann1.DYSV1F Arachis hypogaea HOM05D004771 ORTHO05D005565 1.6e-48 196.8 205 62.9
Lalb_Chr02g0144821 Lupinus albus HOM05D004771 ORTHO05D005565 3.5e-48 195.7 210 60.5
Phvul.007G048400 Phaseolus vulgaris HOM05D004771 ORTHO05D005565 3.0e-47 192.6 207 65.2
arahy.Tifrunner.gnm1.ann1.8327BB Arachis hypogaea HOM05D004771 ORTHO05D005565 4.3e-46 188.7 204 62.3
Medtr3g080910 Medicago truncatula HOM05D004771 ORTHO05D005565 2.6e-43 179.5 150 72.7
VMungo0720G1115 Vigna mungo HOM05D004771 ORTHO05D005565 1.3e-42 177.2 185 63.2
Lj5g0002463 Lotus japonicus HOM05D004771 ORTHO05D005565 2.9e-42 176.0 132 73.5
Ciclev10029331m.g Citrus clementina HOM05D004771 ORTHO05D005565 4.9e-34 148.7 208 48.1
Ciclev10029295m.g Citrus clementina HOM05D004771 ORTHO05D005565 6.4e-34 148.3 205 49.8
Glyma.10G254400 Glycine max HOM05D004771 ORTHO05D005565 5.4e-33 145.2 205 59.5
Aqoxy3G04244 Aquilegia oxysepala HOM05D004771 ORTHO05D005565 9.2e-33 144.4 205 49.3
Aqoxy5G00826 Aquilegia oxysepala HOM05D004771 ORTHO05D005565 2.1e-32 143.3 200 50.0
QL11p028495 Quercus lobata HOM05D004771 ORTHO05D005565 2.1e-32 143.3 135 60.7
Thecc.02G032500 Theobroma cacao HOM05D004771 ORTHO05D005565 2.7e-32 142.9 211 48.3
Aqoxy3G02687 Aquilegia oxysepala HOM05D004771 ORTHO05D005565 3.5e-32 142.5 202 51.5
MD10G1112800 Malus domestica HOM05D004771 ORTHO05D005565 6.0e-32 141.7 219 48.4
TAR628G1069 Trochodendron aralioides HOM05D004771 ORTHO05D005565 6.0e-32 141.7 137 63.5
Duzib132G0558 Durio zibethinus HOM05D004771 ORTHO05D005565 7.8e-32 141.4 218 48.2
CSS0030116 Camellia sinensis var. sinensis HOM05D004771 ORTHO05D005565 1.0e-31 141.0 135 60.7
Potri.015G035700 Populus trichocarpa HOM05D004771 ORTHO05D005565 2.3e-31 139.8 133 64.7
Manes.10G087700 Manihot esculenta HOM05D004771 ORTHO05D005565 3.0e-31 139.4 131 60.3
Sed0002941 Sechium edule HOM05D004771 ORTHO05D005565 3.9e-31 139.0 204 54.4
CSS0010443 Camellia sinensis var. sinensis HOM05D004771 ORTHO05D005565 5.1e-31 138.7 136 60.3
Eucgr.I02508 Eucalyptus grandis HOM05D004771 ORTHO05D005565 6.6e-31 138.3 133 57.9
COL.COLO4_17806 Corchorus olitorius HOM05D004771 ORTHO05D005565 8.6e-31 137.9 134 60.4
Prupe.8G152600 Prunus persica HOM05D004771 ORTHO05D005565 8.6e-31 137.9 209 55.5
ClCG10G002170 Citrullus lanatus HOM05D004771 ORTHO05D005565 1.1e-30 137.5 200 52.0
GSVIVG01022390001 Vitis vinifera HOM05D004771 ORTHO05D005565 1.5e-30 137.1 219 47.0
AUR62038158 Chenopodium quinoa HOM05D004771 ORTHO05D005565 1.9e-30 136.7 130 60.8
GSVIVG01037017001 Vitis vinifera HOM05D004771 ORTHO05D005565 1.9e-30 136.7 204 47.5
TWI23G0030 Tripterygium wilfordii HOM05D004771 ORTHO05D005565 2.5e-30 136.3 203 50.7
Actinidia33010 Actinidia chinensis HOM05D004771 ORTHO05D005565 3.3e-30 136.0 200 50.5
Aa31LG2G7800 Aethionema arabicum HOM05D004771 ORTHO05D005565 4.3e-30 135.6 132 58.3
AUR62009845 Chenopodium quinoa HOM05D004771 ORTHO05D005565 4.3e-30 135.6 130 60.8
Cpa.g.c27001.4 Carica papaya HOM05D004771 ORTHO05D005565 7.3e-30 134.8 206 51.9
MELO3C013897.2 Cucumis melo HOM05D004771 ORTHO05D005565 1.6e-29 133.7 128 59.4
Atru.chr4.2044 Acer truncatum HOM05D004771 ORTHO05D005565 2.8e-29 132.9 203 51.7
QL09p037751 Quercus lobata HOM05D004771 ORTHO05D005565 2.8e-29 132.9 136 58.1
RcHm_v2.0_Chr6g0247751 Rosa chinensis HOM05D004771 ORTHO05D005565 2.8e-29 132.9 125 58.4
TAR625G0649 Trochodendron aralioides HOM05D004771 ORTHO05D005565 2.8e-29 132.9 134 60.4
Aqoxy3G02689_Aqoxy3G02690 Aquilegia oxysepala HOM05D001377 ORTHO05D005565 3.6e-29 132.5 204 52.0
arahy.Tifrunner.gnm1.ann1.ATP5C9 Arachis hypogaea HOM05D004771 ORTHO05D005565 6.2e-29 131.7 130 62.3
EL10Ac7g16361 Beta vulgaris HOM05D004771 ORTHO05D005565 8.1e-29 131.3 130 60.0
PGR142G3141 Punica granatum HOM05D004771 ORTHO05D005565 1.1e-28 131.0 203 49.8
Dinv22681 Davidia involucrata HOM05D004771 ORTHO05D005565 1.4e-28 130.6 114 66.7
FvH4_2g02960 Fragaria vesca HOM05D004771 ORTHO05D005565 1.4e-28 130.6 128 55.5
PSO017G4159 Papaver somniferum HOM05D004771 ORTHO05D005565 1.4e-28 130.6 131 60.3
PSO170G1452 Papaver somniferum HOM05D004771 ORTHO05D005565 1.4e-28 130.6 131 60.3
Dinv44219 Davidia involucrata HOM05D000703 ORTHO05D000633 1.8e-28 130.2 136 59.6
PSO170G1616 Papaver somniferum HOM05D004771 ORTHO05D005565 1.8e-28 130.2 202 53.0
Haze_10334 Corylus avellana HOM05D004771 ORTHO05D005565 2.4e-28 129.8 131 61.8
Gohir.A01G180600 Gossypium hirsutum HOM05D004771 ORTHO05D005565 3.1e-28 129.4 131 58.8
CiPaw.05G182000 Carya illinoinensis HOM05D004771 ORTHO05D005565 4.0e-28 129.0 212 47.6
COL.COLO4_26627 Corchorus olitorius HOM05D004771 ORTHO05D005565 4.0e-28 129.0 134 57.5
PSO528G0234 Papaver somniferum HOM05D004771 ORTHO05D005565 4.0e-28 129.0 202 52.0
CANSAT25G0049 Cannabis sativa HOM05D004771 ORTHO05D005565 5.2e-28 128.6 129 58.9
CANSAT56G2106 Cannabis sativa HOM05D004771 ORTHO05D005565 5.2e-28 128.6 132 58.3
CsaV3_3G002260 Cucumis sativus L. HOM05D004771 ORTHO05D005565 5.2e-28 128.6 132 58.3
Migut.M00048 Erythranthe guttata HOM05D004771 ORTHO05D005565 5.2e-28 128.6 134 61.2
CANSAT25G2974 Cannabis sativa HOM05D004771 ORTHO05D005565 6.8e-28 128.3 128 57.0
Eucgr.C02425 Eucalyptus grandis HOM05D004771 ORTHO05D005565 1.2e-27 127.5 223 41.7
Lj8C288T1 Lonicera japonica HOM05D004771 ORTHO05D005565 1.2e-27 127.5 133 54.1
Gohir.D01G171700 Gossypium hirsutum HOM05D004771 ORTHO05D005565 1.5e-27 127.1 203 46.3
MSTRG.6635 Avicennia marina HOM05D004771 ORTHO05D005565 2.0e-27 126.7 205 48.3
Gorai.002G213200 Gossypium raimondii HOM05D004771 ORTHO05D005565 2.6e-27 126.3 203 46.3
Nn4g25002 Nelumbo nucifera HOM05D004771 ORTHO05D005565 2.6e-27 126.3 128 57.0
Cfa004725 Carpinus fangiana HOM05D004771 ORTHO05D005565 3.4e-27 125.9 202 52.0
MD05G1109000 Malus domestica HOM05D004771 ORTHO05D005565 3.4e-27 125.9 227 48.0
Lj8P345T14 Lonicera japonica HOM05D004771 ORTHO05D005565 4.4e-27 125.6 132 54.5
THA.LOC104816989 Tarenaya hassleriana HOM05D004771 ORTHO05D005565 7.6e-27 124.8 130 58.5
Nn2g15843 Nelumbo nucifera HOM05D004771 ORTHO05D005565 9.9e-27 124.4 204 47.5
FAN24G0749 Fragaria x ananassa HOM05D004771 ORTHO05D005565 1.3e-26 124.0 199 49.2
TWI14G0977 Tripterygium wilfordii HOM05D004771 ORTHO05D005565 1.3e-26 124.0 124 60.5
PGSC0003DMG400005017 Solanum tuberosum HOM05D004771 ORTHO05D005565 2.9e-26 122.9 127 59.1
MBI13_g09224_MAGBIO Magnolia biondii HOM05D004771 ORTHO05D005565 8.4e-26 121.3 219 42.0
Nitab4.5_0002078g0010 Nicotiana tabacum HOM05D004771 ORTHO05D005565 1.1e-25 120.9 130 57.7
Cc00_g19310 Coffea canephora HOM05D004771 ORTHO05D005565 2.4e-25 119.8 205 47.3
Sc12g0010390 Simmondsia chinensis HOM05D004771 ORTHO05D005565 2.4e-25 119.8 111 59.5
Thhalv10019781m.g Eutrema salsugineum HOM05D004771 ORTHO05D005565 5.4e-25 118.6 125 55.2
PGSC0003DMG400028994 Solanum tuberosum HOM05D004771 ORTHO05D005565 5.4e-25 118.6 208 44.7
Sopen04g019850 Solanum pennellii HOM05D004771 ORTHO05D005565 7.1e-25 118.2 137 55.5
Solyc04g049660.3 Solanum lycopersicum HOM05D004771 ORTHO05D005565 9.2e-25 117.9 137 55.5
CAN.G490.38 Capsicum annuum HOM05D004771 ORTHO05D005565 1.2e-24 117.5 134 56.0
Nitab4.5_0000575g0030 Nicotiana tabacum HOM05D004771 ORTHO05D005565 3.5e-24 115.9 200 45.0
Peaxi162Scf00170g00041 Petunia axillaris HOM05D004771 ORTHO05D005565 3.5e-24 115.9 205 46.8
CDE05G2657 Ceratophyllum demersum HOM05D004771 ORTHO05D005565 6.0e-24 115.2 190 42.6
Haze_04594 Corylus avellana HOM05D000399 ORTHO05D000304 1.0e-23 114.4 223 46.6
CAN.G630.7 Capsicum annuum HOM05D004771 ORTHO05D005565 1.3e-23 114.0 205 43.4
SGA_v2.0_scaffold181G39690 Striga asiatica HOM05D004771 ORTHO05D005565 2.3e-23 113.2 133 53.4
ATR0736G167 Amborella trichopoda HOM05D004771 ORTHO05D005565 3.0e-23 112.8 135 54.1
Cc02_g28780 Coffea canephora HOM05D004771 ORTHO05D005565 3.9e-23 112.5 136 54.4
Hund20829 Selenicereus undatus HOM05D004771 ORTHO05D005565 3.9e-23 112.5 203 47.8
BcaC02g09527 Brassica carinata HOM05D004771 ORTHO05D005565 6.6e-23 111.7 133 52.6
C04p43760 Brassica napus HOM05D004771 ORTHO05D005565 6.6e-23 111.7 133 52.6
BolC4t25958H Brassica oleracea HOM05D004771 ORTHO05D005565 6.6e-23 111.7 133 52.6
CDE02G0226 Ceratophyllum demersum HOM05D004771 ORTHO05D005565 8.7e-23 111.3 123 55.3
Lsat_1_v5_gn_1_71561 Lactuca sativa HOM05D007128 ORTHO05D009059 8.7e-23 111.3 82 73.2
ECA248G2169 Erigeron canadensis HOM05D004771 ORTHO05D005565 1.5e-22 110.5 214 48.1
AL2G31090 Arabidopsis lyrata HOM05D004771 ORTHO05D005565 2.5e-22 109.8 125 55.2
AT1G71430 Arabidopsis thaliana HOM05D004771 ORTHO05D005565 7.3e-22 108.2 126 54.0
DCAR_007735 Daucus carota HOM05D004771 ORTHO05D005565 2.1e-21 106.7 136 50.0
HanXRQChr05g0160091 Helianthus annuus HOM05D004771 ORTHO05D005565 2.1e-21 106.7 212 41.0
RhsimUnG0159200 Rhododendron simsii HOM05D004771 ORTHO05D005565 2.1e-21 106.7 208 48.1
arahy.Tifrunner.gnm1.ann1.S1TJ9S Arachis hypogaea HOM05D004771 ORTHO05D005565 2.8e-21 106.3 134 54.5
unitig_899.g15063 Utricularia gibba HOM05D004771 ORTHO05D005565 2.8e-21 106.3 217 42.9
DCAR_027620 Daucus carota HOM05D004771 ORTHO05D005565 3.6e-21 105.9 217 42.4
BcaC03g15291 Brassica carinata HOM05D004771 ORTHO05D005565 1.8e-20 103.6 80 66.2
C02p28980 Brassica napus HOM05D004771 ORTHO05D005565 1.8e-20 103.6 80 66.2
BolC2t08948H Brassica oleracea HOM05D004771 ORTHO05D005565 1.8e-20 103.6 80 66.2
Carub.0002s1828 Capsella rubella HOM05D004771 ORTHO05D005565 2.4e-20 103.2 131 52.7
Zm00001eb002910 Zea mays HOM05D004771 ORTHO05D005565 3.1e-20 102.8 125 49.6
Zm00001eb003040 Zea mays HOM05D004771 ORTHO05D005565 3.1e-20 102.8 125 49.6
arahy.Tifrunner.gnm1.ann1.P0FJQ9 Arachis hypogaea HOM05D004771 ORTHO05D005565 4.0e-20 102.4 122 57.4
BcaB05g24668 Brassica carinata HOM05D004771 ORTHO05D005565 9.0e-20 101.3 87 63.2
Zm00001eb159770 Zea mays HOM05D004771 ORTHO05D005565 9.0e-20 101.3 125 48.8
A02p17330 Brassica napus HOM05D004771 ORTHO05D005565 2.0e-19 100.1 117 52.1
BraA02t06780Z Brassica rapa HOM05D004771 ORTHO05D005565 2.0e-19 100.1 117 52.1
BraA07t31335Z Brassica rapa HOM05D004771 ORTHO05D005565 3.4e-19 99.4 123 51.2
A07p37720 Brassica napus HOM05D004771 ORTHO05D005565 5.8e-19 98.6 78 65.4
C06p45590 Brassica napus HOM05D004771 ORTHO05D005565 5.8e-19 98.6 78 65.4
BolC6t39610H Brassica oleracea HOM05D004771 ORTHO05D005565 5.8e-19 98.6 78 65.4
AUR62017723 Chenopodium quinoa HOM05D004771 ORTHO05D005565 5.8e-19 98.6 72 69.4
vmacro05477 Vaccinium macrocarpon HOM05D004771 ORTHO05D005565 5.8e-19 98.6 160 53.8
Sed0006388 Sechium edule HOM05D004771 ORTHO05D005565 7.6e-19 98.2 74 68.9
arahy.Tifrunner.gnm1.ann1.MQV2C0 Arachis hypogaea HOM05D004771 ORTHO05D005565 9.9e-19 97.8 124 58.9
Sp5g26590 Schrenkiella parvula HOM05D004771 ORTHO05D005565 1.3e-18 97.4 78 65.4
CARHR291250 Cardamine hirsuta HOM05D004771 ORTHO05D005565 1.7e-18 97.1 76 67.1
Manes.07G051000 Manihot esculenta HOM05D004771 ORTHO05D005565 2.2e-18 96.7 147 53.7
Os01g0617800 Oryza sativa ssp. japonica HOM05D004771 ORTHO05D005565 4.9e-18 95.5 204 37.7
HanXRQChr11g0345411 Helianthus annuus HOM05D004771 ORTHO05D005565 2.4e-17 93.2 180 41.1
SEGI_32093 Sequoiadendron giganteum HOM05D004771 ORTHO05D005565 1.6e-16 90.5 132 44.7
HPP92_002219 Vanilla planifolia HOM05D006274 ORTHO05D007782 1.3e-15 87.4 137 44.5
Gohir.D01G171500 Gossypium hirsutum HOM05D004771 ORTHO05D005565 1.5e-14 84.0 63 69.8
Oeu012349.1 Olea europaea HOM05D004771 ORTHO05D005565 1.9e-14 83.6 58 75.9
vmacro00584 Vaccinium macrocarpon HOM05D004771 ORTHO05D005565 4.3e-14 82.4 141 57.4
Rhsim09G0033000 Rhododendron simsii HOM05D004771 ORTHO05D005565 7.3e-14 81.6 196 48.0
SalBow7G1175 Salvia bowleyana HOM05D004771 ORTHO05D005565 2.0e-11 73.6 144 42.4
Nitab4.5_0001458g0040 Nicotiana tabacum HOM05D004771 ORTHO05D005565 7.6e-11 71.6 105 47.6
Pp3c4_10090 Physcomitrium patens HOM05D004771 ORTHO05D005565 9.9e-11 71.2 130 39.2
Lj9C712T7 Lonicera japonica HOM05D003887 ORTHO05D004523 6.4e-10 68.6 52 69.2
CARHR045930 Cardamine hirsuta HOM05D004771 ORTHO05D005565 3.2e-09 66.2 80 51.2
Rhsim02G0173400 Rhododendron simsii HOM05D004771 ORTHO05D005565 4.2e-09 65.9 46 71.7
Mapoly0060s0029 Marchantia polymorpha HOM05D004771 ORTHO05D005565 9.3e-09 64.7 201 33.8
Medtr3g080930 Medicago truncatula HOM05D004771 ORTHO05D005565 1.1e-06 57.8 55 63.6


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