Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g007480 Medicago truncatula HOM05D004975 ORTHO05D005963 1.2e-127 459.9 233 100.0
Psat6g036480 Pisum sativum HOM05D004975 ORTHO05D005963 7.5e-111 404.1 236 86.4
TPR.G24523 Trifolium pratense HOM05D004975 ORTHO05D005963 5.9e-108 394.4 228 86.4
Ca_12771_v3 Cicer arietinum L. HOM05D004975 ORTHO05D005963 6.6e-107 391.0 233 84.1
Lj3g0002799 Lotus japonicus HOM05D004975 ORTHO05D005963 7.3e-106 387.5 236 82.2
Lj3g0015990 Lotus japonicus HOM05D004975 ORTHO05D005963 7.3e-106 387.5 236 81.8
arahy.Tifrunner.gnm1.ann1.1NF0KF Arachis hypogaea HOM05D004975 ORTHO05D005963 1.2e-100 370.2 232 79.3
arahy.Tifrunner.gnm1.ann1.KS8K1P Arachis hypogaea HOM05D004975 ORTHO05D005963 2.7e-100 369.0 232 79.3
Glyma.12G071700 Glycine max HOM05D004975 ORTHO05D005963 5.9e-100 367.9 236 78.4
Glyma.11G153169 Glycine max HOM05D004975 ORTHO05D005963 3.0e-99 365.5 236 77.1
arahy.Tifrunner.gnm1.ann1.GL41SS Arachis hypogaea HOM05D004975 ORTHO05D005963 1.9e-98 362.8 233 77.7
Phvul.011G072600 Phaseolus vulgaris HOM05D004975 ORTHO05D005963 9.5e-98 360.5 236 76.7
Lalb_Chr18g0045061 Lupinus albus HOM05D004975 ORTHO05D005963 1.3e-94 350.1 233 75.1
arahy.Tifrunner.gnm1.ann1.57HDZK Arachis hypogaea HOM05D004975 ORTHO05D005963 9.2e-93 344.0 232 76.3
VMungo1127G2243 Vigna mungo HOM05D004975 ORTHO05D005963 3.2e-85 318.9 233 68.2
Manes.17G086700 Manihot esculenta HOM05D004975 ORTHO05D005963 5.1e-83 311.6 187 80.7
CiPaw.08G019900 Carya illinoinensis HOM05D004975 ORTHO05D005963 1.8e-80 303.1 203 76.4
ClCG10G000990 Citrullus lanatus HOM05D004975 ORTHO05D005963 1.8e-80 303.1 187 77.5
PGR044G1665 Punica granatum HOM05D004975 ORTHO05D005963 1.8e-80 303.1 195 75.4
CiPaw.01G062200 Carya illinoinensis HOM05D004975 ORTHO05D005963 2.3e-80 302.8 218 72.5
Cpa.g.sc6.221 Carica papaya HOM05D004975 ORTHO05D005963 3.1e-80 302.4 217 70.0
MELO3C013792.2 Cucumis melo HOM05D004975 ORTHO05D005963 1.2e-79 300.4 206 73.8
QL12p025158 Quercus lobata HOM05D004975 ORTHO05D005963 7.6e-79 297.7 201 73.6
Eucgr.H01931 Eucalyptus grandis HOM05D004975 ORTHO05D005963 2.2e-78 296.2 185 76.2
Sed0019969 Sechium edule HOM05D004975 ORTHO05D005963 4.9e-78 295.0 202 71.3
Thecc.09G007400 Theobroma cacao HOM05D004975 ORTHO05D005963 8.4e-78 294.3 187 74.9
Duzib187G1289 Durio zibethinus HOM05D004975 ORTHO05D005963 1.4e-77 293.5 205 69.8
Dinv30242 Davidia involucrata HOM05D004975 ORTHO05D005963 1.9e-77 293.1 214 68.7
Hma1.2p1_0140F.1_g063690 Hydrangea macrophylla HOM05D004975 ORTHO05D005963 2.4e-77 292.7 215 70.2
CSS0002597 Camellia sinensis var. sinensis HOM05D004975 ORTHO05D005963 4.1e-77 292.0 197 73.1
TAR625G0147 Trochodendron aralioides HOM05D004975 ORTHO05D005963 4.1e-77 292.0 225 64.0
Gorai.001G069100 Gossypium raimondii HOM05D004975 ORTHO05D005963 7.1e-77 291.2 207 70.0
Hund22233 Selenicereus undatus HOM05D004975 ORTHO05D005963 7.1e-77 291.2 195 72.8
TWI34G1428 Tripterygium wilfordii HOM05D004975 ORTHO05D005963 1.2e-76 290.4 208 68.8
TWI63G0658 Tripterygium wilfordii HOM05D004975 ORTHO05D005963 1.2e-76 290.4 208 67.3
Sc24g0001980 Simmondsia chinensis HOM05D004975 ORTHO05D005963 1.6e-76 290.0 177 77.4
Gohir.A07G060900 Gossypium hirsutum HOM05D004975 ORTHO05D005963 2.1e-76 289.7 207 70.0
Actinidia13417 Actinidia chinensis HOM05D004975 ORTHO05D005963 2.7e-76 289.3 197 72.1
CsaV3_3G001030 Cucumis sativus L. HOM05D004975 ORTHO05D005963 2.7e-76 289.3 194 72.2
Actinidia13302 Actinidia chinensis HOM05D004975 ORTHO05D005963 4.6e-76 288.5 198 70.7
Ciclev10009422m.g Citrus clementina HOM05D004975 ORTHO05D005963 6.0e-76 288.1 207 70.0
TAR383G0773 Trochodendron aralioides HOM05D004975 ORTHO05D005963 6.0e-76 288.1 186 73.1
Ca_29761_v3 Cicer arietinum L. HOM05D004975 ORTHO05D005963 1.0e-75 287.3 171 84.2
Atru.chr7.2646 Acer truncatum HOM05D004975 ORTHO05D005963 1.3e-75 287.0 199 71.4
Potri.018G006900 Populus trichocarpa HOM05D004975 ORTHO05D005963 2.3e-75 286.2 193 70.5
CANSAT64G0033 Cannabis sativa HOM05D004975 ORTHO05D005963 3.0e-75 285.8 203 69.0
Hund06848 Selenicereus undatus HOM05D004975 ORTHO05D005963 3.0e-75 285.8 209 68.4
GSVIVG01009932001 Vitis vinifera HOM05D004975 ORTHO05D005963 3.0e-75 285.8 217 65.4
CANSAT25G3538 Cannabis sativa HOM05D004975 ORTHO05D005963 3.9e-75 285.4 187 72.7
THA.LOC104803875 Tarenaya hassleriana HOM05D004975 ORTHO05D005963 6.6e-75 284.6 177 75.1
Ah.06g191340 Amaranthus hybridus HOM05D004975 ORTHO05D005963 8.6e-75 284.3 182 74.2
Gohir.D07G065600 Gossypium hirsutum HOM05D004975 ORTHO05D005963 1.5e-74 283.5 205 68.8
TAR383G0873 Trochodendron aralioides HOM05D004975 ORTHO05D005963 2.5e-74 282.7 174 76.4
ATR0580G184 Amborella trichopoda HOM05D004975 ORTHO05D005963 1.2e-73 280.4 204 67.2
Duzib168G2230 Durio zibethinus HOM05D004975 ORTHO05D005963 1.6e-73 280.0 187 71.7
CARHR239350 Cardamine hirsuta HOM05D004975 ORTHO05D005963 4.7e-73 278.5 177 72.3
Aqoxy7G00181 Aquilegia oxysepala HOM05D004975 ORTHO05D005963 6.2e-73 278.1 187 70.1
COL.COLO4_19031 Corchorus olitorius HOM05D004975 ORTHO05D005963 6.2e-73 278.1 217 64.1
EL10Ac2g04836 Beta vulgaris HOM05D004975 ORTHO05D005963 8.1e-73 277.7 203 66.0
AL7G20600 Arabidopsis lyrata HOM05D004975 ORTHO05D005963 1.1e-72 277.3 210 64.8
EL10Ac4g08846 Beta vulgaris HOM05D004975 ORTHO05D005963 1.8e-72 276.6 199 66.8
Cc08_g08560 Coffea canephora HOM05D004975 ORTHO05D005963 2.4e-72 276.2 203 66.5
SGA_v2.0_scaffold229G43318 Striga asiatica HOM05D004975 ORTHO05D005963 3.1e-72 275.8 206 65.0
SGA_v2.0_scaffold27G11528 Striga asiatica HOM05D004975 ORTHO05D005963 4.4e-71 271.9 199 65.8
DCAR_007697 Daucus carota HOM05D004975 ORTHO05D005963 7.6e-71 271.2 201 66.7
Thhalv10026230m.g Eutrema salsugineum HOM05D004975 ORTHO05D005963 9.9e-71 270.8 169 74.0
BraA08t33823Z Brassica rapa HOM05D004975 ORTHO05D005963 1.3e-70 270.4 169 74.6
A01p06810 Brassica napus HOM05D004975 ORTHO05D005963 1.7e-70 270.0 169 74.0
BraA01t00633Z Brassica rapa HOM05D004975 ORTHO05D005963 1.7e-70 270.0 169 74.0
Peaxi162Scf00105g00510 Petunia axillaris HOM05D004975 ORTHO05D005963 1.7e-70 270.0 214 64.0
C01p07550 Brassica napus HOM05D004975 ORTHO05D005963 2.2e-70 269.6 169 74.6
BolC1t00736H Brassica oleracea HOM05D004975 ORTHO05D005963 2.2e-70 269.6 169 74.6
BcaB03g12697 Brassica carinata HOM05D004975 ORTHO05D005963 2.9e-70 269.2 169 74.0
Sp7g29320 Schrenkiella parvula HOM05D004975 ORTHO05D005963 2.9e-70 269.2 169 74.0
AT4G31460 Arabidopsis thaliana HOM05D004975 ORTHO05D005963 3.8e-70 268.9 174 71.8
A08p18600 Brassica napus HOM05D004975 ORTHO05D005963 3.8e-70 268.9 168 74.4
MBI16_g41808_MAGBIO Magnolia biondii HOM05D004975 ORTHO05D005963 3.8e-70 268.9 205 64.4
BcaC09g51928 Brassica carinata HOM05D004975 ORTHO05D005963 4.9e-70 268.5 169 74.0
HanXRQChr11g0341541 Helianthus annuus HOM05D004975 ORTHO05D005963 4.9e-70 268.5 195 67.2
HanXRQChr01g0029381 Helianthus annuus HOM05D004975 ORTHO05D005963 6.4e-70 268.1 195 66.7
BcaNung04586 Brassica carinata HOM05D004975 ORTHO05D005963 8.4e-70 267.7 168 73.8
Carub.0007s0909 Capsella rubella HOM05D004975 ORTHO05D005963 1.4e-69 266.9 169 72.8
MSTRG.11721 Avicennia marina HOM05D004975 ORTHO05D005963 1.9e-69 266.5 200 65.5
Nitab4.5_0002393g0070 Nicotiana tabacum HOM05D004975 ORTHO05D005963 1.9e-69 266.5 186 69.4
Aa31LG2G18860 Aethionema arabicum HOM05D004975 ORTHO05D005963 2.4e-69 266.2 195 66.2
Nitab4.5_0000250g0160 Nicotiana tabacum HOM05D004975 ORTHO05D005963 2.4e-69 266.2 204 64.2
Solyc08g065760.3 Solanum lycopersicum HOM05D004975 ORTHO05D005963 3.2e-69 265.8 196 67.9
Sopen10g033590 Solanum pennellii HOM05D004975 ORTHO05D005963 3.2e-69 265.8 196 67.9
ECA248G0122 Erigeron canadensis HOM05D004975 ORTHO05D005963 5.4e-69 265.0 195 67.2
ECA248G2823 Erigeron canadensis HOM05D004975 ORTHO05D005963 7.1e-69 264.6 175 72.6
Migut.A00251 Erythranthe guttata HOM05D004975 ORTHO05D005963 7.1e-69 264.6 206 62.6
PGSC0003DMG400013829 Solanum tuberosum HOM05D004975 ORTHO05D005963 7.1e-69 264.6 196 67.3
BcaC01g01087 Brassica carinata HOM05D004975 ORTHO05D005963 1.6e-68 263.5 169 72.8
C03p87960 Brassica napus HOM05D004975 ORTHO05D005963 1.6e-68 263.5 169 72.8
BolC3t21107H Brassica oleracea HOM05D004975 ORTHO05D005963 1.6e-68 263.5 169 72.8
CDE02G4585 Ceratophyllum demersum HOM05D004975 ORTHO05D005963 2.1e-68 263.1 173 71.7
Sopen08g019440 Solanum pennellii HOM05D004975 ORTHO05D005963 7.8e-68 261.2 178 70.8
Lsat_1_v5_gn_1_49060 Lactuca sativa HOM05D004975 ORTHO05D005963 1.0e-67 260.8 193 65.8
SHI04272 Sapria himalayana HOM05D004975 ORTHO05D005963 1.0e-67 260.8 252 56.7
CDE05G0021 Ceratophyllum demersum HOM05D004975 ORTHO05D005963 3.9e-67 258.8 184 67.9
unitig_46.g18530 Utricularia gibba HOM05D004975 ORTHO05D005963 1.1e-66 257.3 178 69.1
RcHm_v2.0_Chr6g0305011 Rosa chinensis HOM05D004975 ORTHO05D005963 5.6e-66 255.0 223 61.4
FvH4_2g36661 Fragaria vesca HOM05D004975 ORTHO05D005963 9.6e-66 254.2 219 59.8
FAN20G1154 Fragaria x ananassa HOM05D007251 ORTHO05D009266 4.8e-65 251.9 223 60.1
HPP92_011116 Vanilla planifolia HOM05D004975 ORTHO05D005963 1.4e-64 250.4 193 62.7
Os07g0544900 Oryza sativa ssp. japonica HOM05D004975 ORTHO05D005963 3.1e-64 249.2 198 62.6
Sabra18G0014600 Salix brachista HOM05D004975 ORTHO05D005963 1.5e-63 246.9 279 48.4
Rhsim04G0150100 Rhododendron simsii HOM05D004975 ORTHO05D005963 3.4e-63 245.7 188 66.0
MD08G1128100 Malus domestica HOM05D004975 ORTHO05D005963 5.8e-63 245.0 235 55.3
MD15G1107600 Malus domestica HOM05D004975 ORTHO05D005963 1.3e-62 243.8 243 53.1
Prupe.1G459900 Prunus persica HOM05D004975 ORTHO05D005963 1.7e-62 243.4 236 55.1
Zm00001eb323470 Zea mays HOM05D004975 ORTHO05D005963 3.8e-62 242.3 201 58.2
Zm00001eb106440 Zea mays HOM05D004975 ORTHO05D005963 2.5e-58 229.6 202 55.9
Manes.15G137600 Manihot esculenta HOM05D004975 ORTHO05D005963 2.1e-57 226.5 187 62.0
PSO063G2087 Papaver somniferum HOM05D004975 ORTHO05D005963 2.8e-57 226.1 186 61.3
PSO170G1562 Papaver somniferum HOM05D004975 ORTHO05D005963 2.8e-57 226.1 186 61.3
Haze_21744 Corylus avellana HOM05D004975 ORTHO05D005963 3.7e-57 225.7 286 46.9
PSO063G4606 Papaver somniferum HOM05D004975 ORTHO05D005963 8.1e-57 224.6 164 67.1
SEGI_29047 Sequoiadendron giganteum HOM05D004975 ORTHO05D005963 4.5e-55 218.8 169 59.8
FAN06G0478 Fragaria x ananassa HOM05D004975 ORTHO05D005963 3.8e-54 215.7 215 55.8
FvH4_7g03740 Fragaria vesca HOM05D004975 ORTHO05D005963 1.1e-53 214.2 164 64.6
PSO782G1312 Papaver somniferum HOM05D004975 ORTHO05D005963 2.7e-52 209.5 140 71.4
Nn2g12690 Nelumbo nucifera HOM05D004975 ORTHO05D005963 5.1e-51 205.3 139 72.7
Lj7C709T7 Lonicera japonica HOM05D004975 ORTHO05D005963 3.3e-50 202.6 135 72.6
CAN.G886.9 Capsicum annuum HOM05D004975 ORTHO05D005963 3.8e-46 189.1 131 70.2
AUR62027460 Chenopodium quinoa HOM05D004975 ORTHO05D005963 3.8e-46 189.1 129 70.5
Cfa013273 Carpinus fangiana HOM05D004975 ORTHO05D005963 4.8e-41 172.2 107 74.8
Oeu031567.1 Olea europaea HOM05D004975 ORTHO05D005963 4.8e-41 172.2 147 55.8
HPP92_011121 Vanilla planifolia HOM05D004975 ORTHO05D005963 1.1e-40 171.0 148 58.1
vmacro05353 Vaccinium macrocarpon HOM05D004975 ORTHO05D005963 4.1e-40 169.1 136 64.0
AagrBONN_evm.TU.Sc2ySwM_117.1642 Anthoceros agrestis HOM05D004975 ORTHO05D005963 3.0e-35 152.9 131 55.7
Mapoly0026s0002 Marchantia polymorpha HOM05D004975 ORTHO05D005963 3.9e-35 152.5 105 62.9
Solyc10g038060.2 Solanum lycopersicum HOM05D004975 ORTHO05D005963 3.9e-35 152.5 121 62.0
Pp3c2_35700 Physcomitrium patens HOM05D004975 ORTHO05D005963 8.7e-35 151.4 149 53.0
SMO367G1088 Selaginella moellendorffii HOM05D004975 ORTHO05D005963 7.4e-34 148.3 113 60.2
BcaC01g01097 Brassica carinata HOM05D004975 ORTHO05D005963 1.0e-30 137.9 93 67.7
C03p88060 Brassica napus HOM05D004975 ORTHO05D005963 1.7e-30 137.1 91 68.1
BcaNung01521 Brassica carinata HOM05D004975 ORTHO05D005963 4.7e-28 129.0 79 74.7
BcaNung04139 Brassica carinata HOM05D004975 ORTHO05D005963 4.7e-28 129.0 79 74.7
Aqoxy3G03669 Aquilegia oxysepala HOM05D004975 ORTHO05D005963 4.2e-21 105.9 72 68.1
BcaB03g12699 Brassica carinata HOM05D004975 ORTHO05D005963 3.6e-20 102.8 90 54.4
AUR62027459 Chenopodium quinoa HOM05D004975 ORTHO05D005963 6.7e-19 98.6 66 71.2
PRCOL_00000323 Prasinoderma coloniale HOM05D004975 ORTHO05D005963 5.7e-18 95.5 88 52.3
Cfa025056 Carpinus fangiana HOM05D004975 ORTHO05D005963 5.0e-14 82.4 78 50.0
Oeu033208.1 Olea europaea HOM05D004975 ORTHO05D005963 2.5e-13 80.1 96 44.8
CBR_g8145 Chara braunii HOM05D004975 ORTHO05D005963 1.6e-12 77.4 54 64.8
Sopen10g011390 Solanum pennellii HOM05D004975 ORTHO05D005963 3.0e-11 73.2 59 61.0
AagrBONN_evm.TU.Sc2ySwM_368.1480 Anthoceros agrestis HOM05D001654 ORTHO05D002773 7.5e-10 68.6 46 58.7
CiPaw.07G212300 Carya illinoinensis HOM05D004975 ORTHO05D005963 7.5e-10 68.6 48 66.7


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