Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1581s0010 Medicago truncatula HOM05D000506 ORTHO05D000369 9.3e-209 729.9 365 100.0
Cre12.g514200 Chlamydomonas reinhardtii HOM05D000506 ORTHO05D000369 2.2e-16 90.9 197 33.0
Cfa027082 Carpinus fangiana HOM05D000506 ORTHO05D000369 3.5e-14 83.6 121 38.8
MD13G1071000 Malus domestica HOM05D000506 ORTHO05D000369 1.3e-08 65.1 124 33.9
CANSAT64G1485 Cannabis sativa HOM05D000506 ORTHO05D000369 2.2e-08 64.3 184 28.8
MD16G1071700 Malus domestica HOM05D000506 ORTHO05D000369 3.8e-08 63.5 124 33.1
Glyma.01G048800 Glycine max HOM05D000506 ORTHO05D000369 1.1e-07 62.0 184 25.5
Glyma.02G108400 Glycine max HOM05D000506 ORTHO05D000369 1.4e-07 61.6 174 27.0
Gohir.A03G101200 Gossypium hirsutum HOM05D000506 ORTHO05D000369 2.4e-07 60.8 174 28.2
Lj2g0002037 Lotus japonicus HOM05D000506 ORTHO05D000369 2.4e-07 60.8 174 29.3
QL03p068725 Quercus lobata HOM05D000506 ORTHO05D000369 2.4e-07 60.8 173 27.2
Potri.008G087400 Populus trichocarpa HOM05D000506 ORTHO05D000369 3.2e-07 60.5 174 28.2
Phvul.002G084200 Phaseolus vulgaris HOM05D000506 ORTHO05D000369 5.4e-07 59.7 128 28.9
MD16G1071800 Malus domestica HOM05D000506 ORTHO05D000369 7.1e-07 59.3 113 31.0
Gohir.D02G126000 Gossypium hirsutum HOM05D000506 ORTHO05D000369 1.2e-06 58.5 174 27.6
RcHm_v2.0_Chr4g0439631 Rosa chinensis HOM05D000506 ORTHO05D000369 1.2e-06 58.5 118 31.4
Haze_12002 Corylus avellana HOM05D000506 ORTHO05D000369 2.1e-06 57.8 173 26.0
Gorai.005G141700 Gossypium raimondii HOM05D000506 ORTHO05D000369 2.1e-06 57.8 174 27.6
Prupe.1G275800 Prunus persica HOM05D000506 ORTHO05D000369 2.1e-06 57.8 128 32.0
arahy.Tifrunner.gnm1.ann1.SH1P3W Arachis hypogaea HOM05D000506 ORTHO05D000369 2.7e-06 57.4 174 26.4
arahy.Tifrunner.gnm1.ann1.XUG5FC Arachis hypogaea HOM05D000506 ORTHO05D000369 2.7e-06 57.4 174 26.4
Eucgr.G02495 Eucalyptus grandis HOM05D000506 ORTHO05D000369 3.5e-06 57.0 116 33.6
Mapoly0057s0016 Marchantia polymorpha HOM05D001272 ORTHO05D009067 3.5e-06 57.0 134 34.3
VMungo1215G0221 Vigna mungo HOM05D000506 ORTHO05D000369 3.5e-06 57.0 128 28.1
Cfa008970 Carpinus fangiana HOM05D000506 ORTHO05D000369 4.6e-06 56.6 124 28.2
Cfa026667 Carpinus fangiana HOM05D000506 ORTHO05D000369 4.6e-06 56.6 121 31.4
CiPaw.05G133900 Carya illinoinensis HOM05D000506 ORTHO05D000369 4.6e-06 56.6 185 25.9


User provided reference genes

Program Settings