Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1463s0010 Medicago truncatula HOM05D000676 ORTHO05D263537 2.5e-56 221.9 111 100.0
Medtr1g106790 Medicago truncatula HOM05D000676 ORTHO05D001458 1.0e-20 103.6 129 51.9
Medtr4g121520 Medicago truncatula HOM05D000676 ORTHO05D009933 2.8e-15 85.5 99 54.5
TPR.G27103 Trifolium pratense HOM05D000676 ORTHO05D001458 6.3e-15 84.3 129 42.6
Phvul.007G045500 Phaseolus vulgaris HOM05D000676 ORTHO05D001458 4.1e-14 81.6 129 42.6
TPR.G27131 Trifolium pratense HOM05D000676 ORTHO05D001458 4.1e-14 81.6 129 43.4
Phvul.007G045900 Phaseolus vulgaris HOM05D000676 ORTHO05D001458 2.0e-13 79.3 129 38.8
Medtr1g106770 Medicago truncatula HOM05D000676 ORTHO05D001458 2.6e-13 79.0 129 41.1
Glyma.10G257000 Glycine max HOM05D000676 ORTHO05D001458 4.5e-13 78.2 129 42.6
Glyma.20G134200 Glycine max HOM05D000676 ORTHO05D001458 1.3e-12 76.6 129 41.1
VMungo0720G2708 Vigna mungo HOM05D000676 ORTHO05D001458 1.7e-12 76.3 129 40.3
Ca_02940_v3 Cicer arietinum L. HOM05D000676 ORTHO05D001458 5.0e-12 74.7 129 40.3
Medtr1g106200 Medicago truncatula HOM05D000676 ORTHO05D001458 6.5e-12 74.3 159 37.1
Medtr1g106910 Medicago truncatula HOM05D000676 ORTHO05D001458 1.1e-11 73.6 129 39.5
FAN15G0992 Fragaria x ananassa HOM05D000676 ORTHO05D001458 2.5e-11 72.4 149 36.2
FAN24G1404 Fragaria x ananassa HOM05D000676 ORTHO05D001458 2.5e-11 72.4 149 36.2
FvH4_2g03791 Fragaria vesca HOM05D000676 ORTHO05D001458 3.2e-11 72.0 149 36.2
TPR.G21128 Trifolium pratense HOM05D000676 ORTHO05D001458 3.2e-11 72.0 137 37.2
Ca_02941_v3 Cicer arietinum L. HOM05D000676 ORTHO05D001458 4.2e-11 71.6 129 38.8
Phvul.007G045400 Phaseolus vulgaris HOM05D000676 ORTHO05D001458 7.2e-11 70.9 129 39.5
Potri.009G087800 Populus trichocarpa HOM05D000676 ORTHO05D001458 1.2e-10 70.1 129 38.0
Sabra09G0067800 Salix brachista HOM05D000676 ORTHO05D001458 1.2e-10 70.1 129 38.8
RcHm_v2.0_Chr6g0252821 Rosa chinensis HOM05D000676 ORTHO05D001458 1.6e-10 69.7 149 34.9
TPR.G823 Trifolium pratense HOM05D000676 ORTHO05D001458 1.6e-10 69.7 128 41.4
Psat6g214800 Pisum sativum HOM05D000676 ORTHO05D001458 2.1e-10 69.3 129 38.0
Cfa004664 Carpinus fangiana HOM05D000676 ORTHO05D001458 2.7e-10 68.9 149 36.9
Lj5g0004068 Lotus japonicus HOM05D000676 ORTHO05D001458 3.6e-10 68.6 129 38.8
Psat6g214880 Pisum sativum HOM05D000676 ORTHO05D001458 3.6e-10 68.6 129 39.5
Eucgr.G01217 Eucalyptus grandis HOM05D000676 ORTHO05D001458 6.1e-10 67.8 129 38.8
Sabra09G0067900 Salix brachista HOM05D000676 ORTHO05D001458 7.9e-10 67.4 129 37.2
TPR.G27120 Trifolium pratense HOM05D000676 ORTHO05D013012 7.9e-10 67.4 39 79.5
Lj5g0027242 Lotus japonicus HOM05D000676 ORTHO05D001458 2.3e-09 65.9 129 36.4
Sabra09G0068200 Salix brachista HOM05D000676 ORTHO05D001458 2.3e-09 65.9 129 36.4
CANSAT25G1732 Cannabis sativa HOM05D000676 ORTHO05D001458 3.0e-09 65.5 129 36.4
Eucgr.G01209 Eucalyptus grandis HOM05D000676 ORTHO05D001458 3.0e-09 65.5 95 44.2
Prupe.8G145600 Prunus persica HOM05D000676 ORTHO05D001458 3.0e-09 65.5 129 38.0
Sabra09G0068100 Salix brachista HOM05D000676 ORTHO05D001458 3.0e-09 65.5 129 37.2
Eucgr.G01215 Eucalyptus grandis HOM05D000676 ORTHO05D001458 3.9e-09 65.1 129 37.2
THA.LOC104819528 Tarenaya hassleriana HOM05D000676 ORTHO05D001458 3.9e-09 65.1 155 35.5
Haze_10261 Corylus avellana HOM05D000676 ORTHO05D001458 6.7e-09 64.3 149 35.6
Glyma.20G134500 Glycine max HOM05D000676 ORTHO05D013012 6.7e-09 64.3 39 76.9
Lalb_Chr06g0165101 Lupinus albus HOM05D000676 ORTHO05D001458 6.7e-09 64.3 144 34.7
Potri.009G087700 Populus trichocarpa HOM05D000676 ORTHO05D001458 6.7e-09 64.3 129 37.2
Manes.07G059400 Manihot esculenta HOM05D000676 ORTHO05D001458 8.8e-09 63.9 129 37.2
CiPaw.05G018200 Carya illinoinensis HOM05D000676 ORTHO05D001458 1.1e-08 63.5 148 33.1
Eucgr.G01214 Eucalyptus grandis HOM05D000676 ORTHO05D001458 1.5e-08 63.2 129 38.0
MD05G1100900 Malus domestica HOM05D000676 ORTHO05D001458 1.5e-08 63.2 129 37.2
Eucgr.G01213 Eucalyptus grandis HOM05D000676 ORTHO05D001458 1.9e-08 62.8 129 37.2
Potri.009G087600 Populus trichocarpa HOM05D000676 ORTHO05D001458 1.9e-08 62.8 129 38.0
arahy.Tifrunner.gnm1.ann1.0P6Y6P Arachis hypogaea HOM05D000676 ORTHO05D001458 3.3e-08 62.0 157 32.5
Eucgr.G01206 Eucalyptus grandis HOM05D000676 ORTHO05D001458 3.3e-08 62.0 129 37.2
Eucgr.G01205 Eucalyptus grandis HOM05D000676 ORTHO05D001458 4.3e-08 61.6 129 35.7
Eucgr.G01210 Eucalyptus grandis HOM05D000676 ORTHO05D001458 4.3e-08 61.6 129 35.7
Cpa.g.sc106.44 Carica papaya HOM05D000676 ORTHO05D001458 5.7e-08 61.2 130 37.7
Manes.07G059300 Manihot esculenta HOM05D000676 ORTHO05D001458 5.7e-08 61.2 129 35.7
PGR042G0582 Punica granatum HOM05D000676 ORTHO05D001458 9.7e-08 60.5 137 32.8
Ciclev10028089m.g Citrus clementina HOM05D000676 ORTHO05D001458 1.3e-07 60.1 129 36.4
Carub.0003s2871 Capsella rubella HOM05D000676 ORTHO05D001458 1.7e-07 59.7 139 32.4
AT2G14690 Arabidopsis thaliana HOM05D000676 ORTHO05D001458 2.8e-07 58.9 149 32.2
Atru.chr5.2338_Atru.chr5.2339 Acer truncatum HOM05D000676 ORTHO05D001458 6.3e-07 57.8 130 35.4
MELO3C018013.2 Cucumis melo HOM05D000676 ORTHO05D001458 8.2e-07 57.4 49 57.1
AL3G46390 Arabidopsis lyrata HOM05D000676 ORTHO05D001458 1.1e-06 57.0 148 31.1
Carub.0007s0662 Capsella rubella HOM05D000676 ORTHO05D001458 1.1e-06 57.0 66 45.5
Sed0004315 Sechium edule HOM05D000676 ORTHO05D001458 1.1e-06 57.0 49 57.1
BcaB03g16252 Brassica carinata HOM05D000676 ORTHO05D001458 1.4e-06 56.6 59 49.2
BcaNung02920 Brassica carinata HOM05D000676 ORTHO05D001458 1.4e-06 56.6 53 56.6
BraA07t28373Z Brassica rapa HOM05D000676 ORTHO05D001458 1.4e-06 56.6 59 49.2
ClCG10G010240 Citrullus lanatus HOM05D000676 ORTHO05D001458 1.4e-06 56.6 49 57.1
arahy.Tifrunner.gnm1.ann1.I5195F Arachis hypogaea HOM05D043297 ORTHO05D083323 1.8e-06 56.2 66 50.0
A03p62340 Brassica napus HOM05D000676 ORTHO05D001458 1.8e-06 56.2 49 57.1
A07p05720 Brassica napus HOM05D000676 ORTHO05D001458 1.8e-06 56.2 59 49.2
CARHR286410 Cardamine hirsuta HOM05D000676 ORTHO05D001458 1.8e-06 56.2 62 48.4
COL.COLO4_32512 Corchorus olitorius HOM05D000676 ORTHO05D001458 1.8e-06 56.2 129 36.4
AL7G17640 Arabidopsis lyrata HOM05D000676 ORTHO05D001458 2.4e-06 55.8 53 56.6
BcaC06g36005 Brassica carinata HOM05D000676 ORTHO05D001458 2.4e-06 55.8 59 49.2
C07p09100 Brassica napus HOM05D000676 ORTHO05D001458 2.4e-06 55.8 59 49.2
BolC7t41321H Brassica oleracea HOM05D000676 ORTHO05D001458 2.4e-06 55.8 59 49.2
Sp7g31550 Schrenkiella parvula HOM05D000676 ORTHO05D001458 2.4e-06 55.8 54 53.7
CARHR241900 Cardamine hirsuta HOM05D000676 ORTHO05D001458 3.1e-06 55.5 139 30.9
AL7G17650 Arabidopsis lyrata HOM05D000676 ORTHO05D001458 4.1e-06 55.1 54 55.6
C07p59900 Brassica napus HOM05D000676 ORTHO05D001458 4.1e-06 55.1 53 54.7
BolC7t46434H Brassica oleracea HOM05D000676 ORTHO05D001458 4.1e-06 55.1 53 54.7
Manes.07G059200 Manihot esculenta HOM05D000676 ORTHO05D001458 4.1e-06 55.1 153 32.0
TWI59G1100 Tripterygium wilfordii HOM05D000676 ORTHO05D001458 4.1e-06 55.1 148 29.7
Sp3g27790 Schrenkiella parvula HOM05D000676 ORTHO05D001458 5.3e-06 54.7 55 50.9
TAR381G1018 Trochodendron aralioides HOM05D000676 ORTHO05D001458 5.3e-06 54.7 129 31.8
BcaNung04327 Brassica carinata HOM05D000676 ORTHO05D001458 6.9e-06 54.3 49 55.1
CsaV3_4G000190 Cucumis sativus L. HOM05D000676 ORTHO05D001458 6.9e-06 54.3 49 53.1


User provided reference genes

Program Settings