Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr0216s0030 Medicago truncatula HOM05D005276 ORTHO05D006813 1.6e-109 399.4 197 100.0
Medtr0807s0020 Medicago truncatula HOM05D005276 ORTHO05D006813 3.9e-84 315.1 199 76.9
Medtr6g048910 Medicago truncatula HOM05D005276 ORTHO05D006813 1.3e-42 177.2 195 46.7
Medtr6g048620 Medicago truncatula HOM05D005276 ORTHO05D006813 6.2e-42 174.9 199 46.2
TPR.G10459 Trifolium pratense HOM05D005276 ORTHO05D006813 6.9e-41 171.4 203 41.9
Medtr6g045077 Medicago truncatula HOM05D005276 ORTHO05D006813 2.0e-40 169.9 195 44.1
Psat0s876g0040 Pisum sativum HOM05D005276 ORTHO05D006813 1.1e-38 164.1 196 41.8
Psat0s876g0120 Pisum sativum HOM05D005276 ORTHO05D006813 5.5e-38 161.8 196 41.3
TPR.G33522 Trifolium pratense HOM05D005276 ORTHO05D006813 6.1e-37 158.3 196 39.3
VMungo0720G1899 Vigna mungo HOM05D005276 ORTHO05D006813 5.1e-36 155.2 193 44.0
Ca_08210_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 1.5e-35 153.7 194 41.8
Psat0s1021g0280 Pisum sativum HOM05D005276 ORTHO05D006813 1.9e-35 153.3 193 40.9
TPR.G33545 Trifolium pratense HOM05D005276 ORTHO05D006813 1.9e-35 153.3 201 43.3
Psat0s971g0080 Pisum sativum HOM05D005276 ORTHO05D006813 2.5e-35 152.9 196 41.8
Medtr1g066530 Medicago truncatula HOM05D005276 ORTHO05D006813 4.3e-35 152.1 197 41.1
Phvul.007G275900 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 4.3e-35 152.1 193 42.0
TPR.G33532 Trifolium pratense HOM05D005276 ORTHO05D006813 9.7e-35 151.0 194 39.2
Medtr0057s0100 Medicago truncatula HOM05D005276 ORTHO05D006813 1.3e-34 150.6 193 38.9
Medtr6g073540 Medicago truncatula HOM05D005276 ORTHO05D006813 2.2e-34 149.8 196 42.9
Psat5g117800 Pisum sativum HOM05D005276 ORTHO05D006813 4.8e-34 148.7 196 39.3
Psat5g117840 Pisum sativum HOM05D005276 ORTHO05D006813 4.8e-34 148.7 196 39.3
Phvul.007G276200 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 6.3e-34 148.3 196 41.3
Phvul.007G277100 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.8e-33 146.7 201 39.8
Medtr0057s0170 Medicago truncatula HOM05D005276 ORTHO05D006813 3.1e-33 146.0 193 37.8
Phvul.009G133400 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 6.9e-33 144.8 193 42.5
VMungo0720G2700 Vigna mungo HOM05D005276 ORTHO05D006813 6.9e-33 144.8 196 41.3
Medtr6g072470 Medicago truncatula HOM05D005276 ORTHO05D006813 9.0e-33 144.4 196 41.8
Phvul.007G276500 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.2e-32 144.1 196 40.8
Ca_03455_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 1.5e-32 143.7 194 42.8
Medtr0695s0030 Medicago truncatula HOM05D005276 ORTHO05D006813 2.0e-32 143.3 195 37.9
Phvul.007G275800 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 4.5e-32 142.1 194 42.8
Phvul.007G276300 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 4.5e-32 142.1 193 39.4
Medtr8g038100 Medicago truncatula HOM05D005276 ORTHO05D006813 5.9e-32 141.7 195 37.4
Rhsim04G0073100 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.0e-31 141.0 198 37.9
Psat0s3494g0040 Pisum sativum HOM05D005276 ORTHO05D006813 1.3e-31 140.6 195 37.9
Psat1g110680 Pisum sativum HOM05D005276 ORTHO05D006813 1.3e-31 140.6 195 37.9
VMungo0720G3131 Vigna mungo HOM05D005276 ORTHO05D006813 1.7e-31 140.2 194 43.3
Medtr8g038070 Medicago truncatula HOM05D005276 ORTHO05D006813 2.2e-31 139.8 195 37.4
vmacro22834 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 2.2e-31 139.8 200 40.0
Rhsim04G0116800 Rhododendron simsii HOM05D005276 ORTHO05D006813 2.9e-31 139.4 198 36.9
Phvul.008G252000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 3.8e-31 139.0 193 40.4
Medtr6g048810 Medicago truncatula HOM05D005276 ORTHO05D006813 5.0e-31 138.7 266 32.0
Rhsim08G0006900 Rhododendron simsii HOM05D005276 ORTHO05D006813 6.5e-31 138.3 198 35.9
Hma1.2p1_0472F.1_g160020 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.1e-30 137.5 199 40.2
Medtr6g040290 Medicago truncatula HOM05D005276 ORTHO05D006813 1.1e-30 137.5 196 36.2
Medtr6g048880 Medicago truncatula HOM05D005276 ORTHO05D006813 1.4e-30 137.1 151 47.0
Hma1.2p1_0370F.1_g137770 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.9e-30 136.7 199 39.7
Phvul.007G276000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 3.2e-30 136.0 196 38.8
Rhsim04G0165600 Rhododendron simsii HOM05D005276 ORTHO05D006813 3.2e-30 136.0 199 38.7
PGR102G3141 Punica granatum HOM05D005276 ORTHO05D006813 4.2e-30 135.6 201 37.8
Hma1.2p1_0472F.1_g159990 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 5.5e-30 135.2 199 38.7
Ca_23693_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 7.2e-30 134.8 241 32.8
VMungo0720G2128 Vigna mungo HOM05D005276 ORTHO05D006813 9.4e-30 134.4 196 38.8
Actinidia07622 Actinidia chinensis HOM05D005276 ORTHO05D006813 2.1e-29 133.3 198 37.4
Medtr7g103990 Medicago truncatula HOM05D005276 ORTHO05D006813 2.7e-29 132.9 196 36.2
Hma1.2p1_0052F.1_g030780 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 4.6e-29 132.1 199 38.7
Hma1.2p1_0472F.1_g160005 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 4.6e-29 132.1 199 38.7
Phvul.007G276100 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 6.1e-29 131.7 193 38.9
Rhsim05G0197900 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.0e-28 131.0 197 38.6
TWI23G0671 Tripterygium wilfordii HOM05D005276 ORTHO05D006813 6.7e-28 128.3 196 36.7
Phvul.007G275700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.0e-27 126.7 177 39.0
Phvul.007G277000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 7.4e-27 124.8 177 38.4
Rhsim05G0142600 Rhododendron simsii HOM05D005276 ORTHO05D006813 9.7e-27 124.4 198 35.9
RcHm_v2.0_Chr5g0076681 Rosa chinensis HOM05D005276 ORTHO05D006813 1.7e-26 123.6 200 37.0
AUR62016119 Chenopodium quinoa HOM05D005276 ORTHO05D006813 1.4e-25 120.6 194 38.1
PGR031G1219 Punica granatum HOM05D005276 ORTHO05D006813 6.9e-25 118.2 196 36.7
Phvul.007G263500 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.6e-24 116.3 197 37.6
EL10Ac1g01352 Beta vulgaris HOM05D005276 ORTHO05D006813 4.5e-24 115.5 191 34.0
PGR102G1949 Punica granatum HOM05D005276 ORTHO05D006813 5.9e-24 115.2 206 35.4
EL10Ac3g05487 Beta vulgaris HOM05D005276 ORTHO05D006813 7.7e-24 114.8 194 33.5
Phvul.007G275600 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.2e-23 113.2 194 34.0
AUR62041391 Chenopodium quinoa HOM05D005276 ORTHO05D006813 6.5e-23 111.7 190 38.4
PGR102G1815 Punica granatum HOM05D005276 ORTHO05D006813 2.5e-22 109.8 207 33.3
EL10Ac1g01354 Beta vulgaris HOM05D005276 ORTHO05D006813 7.2e-22 108.2 195 33.3
EL10Ac1g01356 Beta vulgaris HOM05D005276 ORTHO05D006813 7.2e-22 108.2 195 33.3
EL10Ac1g01358 Beta vulgaris HOM05D005276 ORTHO05D006813 7.2e-22 108.2 195 33.3
VMungo0720G1439 Vigna mungo HOM05D005276 ORTHO05D006813 1.2e-21 107.5 194 35.6
Ah.02g117180 Amaranthus hybridus HOM05D005276 ORTHO05D006813 1.4e-20 104.0 195 34.9
TPR.G28516 Trifolium pratense HOM05D005276 ORTHO05D006813 2.3e-20 103.2 135 39.3
EL10Ac4g09362 Beta vulgaris HOM05D005276 ORTHO05D006813 5.1e-20 102.1 198 34.3
Rhsim10G0134200 Rhododendron simsii HOM05D005276 ORTHO05D006813 5.1e-20 102.1 197 34.5
EL10Ac2g04799 Beta vulgaris HOM05D005276 ORTHO05D006813 6.7e-20 101.7 198 33.8
Hma1.2p1_2291F.1_g319080 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 6.7e-20 101.7 142 39.4
VMungo0720G2085 Vigna mungo HOM05D005276 ORTHO05D006813 2.0e-19 100.1 134 42.5
EL10Ac2g04798 Beta vulgaris HOM05D005276 ORTHO05D006813 3.3e-19 99.4 199 33.2
Medtr7g012000 Medicago truncatula HOM05D005276 ORTHO05D006813 5.7e-19 98.6 120 42.5
Ah.10g029400 Amaranthus hybridus HOM05D005276 ORTHO05D006813 7.4e-19 98.2 198 31.3
AUR62014887 Chenopodium quinoa HOM05D005276 ORTHO05D006813 7.4e-19 98.2 194 31.4
Ah.02g121010 Amaranthus hybridus HOM05D005276 ORTHO05D006813 9.7e-19 97.8 197 31.0
vmacro00373 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 9.7e-19 97.8 164 36.0
CSS0004680 Camellia sinensis var. sinensis HOM05D005276 ORTHO05D006813 6.3e-18 95.1 132 38.6
CSS0029999 Camellia sinensis var. sinensis HOM05D005276 ORTHO05D006813 8.2e-18 94.7 148 35.8
Lj3g0023477 Lotus japonicus HOM05D005276 ORTHO05D006813 1.8e-17 93.6 128 39.8
EL10Ac1g01353 Beta vulgaris HOM05D005276 ORTHO05D006813 2.6e-16 89.7 200 28.5
Os04g0213100 Oryza sativa ssp. japonica HOM05D005276 ORTHO05D006813 2.6e-16 89.7 203 29.1
AUR62014758 Chenopodium quinoa HOM05D005276 ORTHO05D006813 3.5e-16 89.4 159 37.1
PGR102G2116 Punica granatum HOM05D005276 ORTHO05D006813 2.2e-15 86.7 139 38.1
Phvul.007G276401 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.9e-15 86.3 101 41.6
Hma1.2p1_0052F.1_g030770 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 5.0e-15 85.5 193 31.6
Hma1.2p1_0472F.1_g160029 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 5.0e-15 85.5 193 31.6
Rhsim05G0197600 Rhododendron simsii HOM05D005276 ORTHO05D006813 8.5e-15 84.7 152 32.9
EL10Ac1g02097 Beta vulgaris HOM05D005276 ORTHO05D006813 1.2e-13 80.9 196 30.1
vmacro13228 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 2.7e-13 79.7 145 34.5
Medtr6g049040 Medicago truncatula HOM05D005276 ORTHO05D006813 3.6e-13 79.3 136 33.1
EL10Ac1g02109 Beta vulgaris HOM05D005276 ORTHO05D006813 6.1e-13 78.6 200 29.5
Dinv42431 Davidia involucrata HOM05D005276 ORTHO05D006813 6.1e-13 78.6 145 33.8
EL10Ac1g02090 Beta vulgaris HOM05D005276 ORTHO05D006813 1.8e-12 77.0 198 28.3
TPR.G40462 Trifolium pratense HOM05D005276 ORTHO05D006813 1.8e-12 77.0 91 40.7
EL10Ac1g01355 Beta vulgaris HOM05D005276 ORTHO05D006813 2.3e-12 76.6 138 34.8
EL10Ac1g01357 Beta vulgaris HOM05D005276 ORTHO05D006813 2.3e-12 76.6 138 34.8
Phvul.002G269700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 3.0e-12 76.3 94 39.4
AUR62024089 Chenopodium quinoa HOM05D005276 ORTHO05D006813 2.0e-11 73.6 181 26.0
Medtr4g102470 Medicago truncatula HOM05D005276 ORTHO05D006813 2.0e-11 73.6 183 30.1
Lj6C375G5 Lonicera japonica HOM05D005276 ORTHO05D001431 3.3e-11 72.8 125 34.4
RcHm_v2.0_Chr5g0076491 Rosa chinensis HOM05D005276 ORTHO05D006813 7.4e-11 71.6 110 36.4
Phvul.007G276700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 8.2e-10 68.2 94 38.3
RcHm_v2.0_Chr5g0076401 Rosa chinensis HOM05D005276 ORTHO05D006813 4.1e-09 65.9 103 38.8
Phvul.007G263700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 7.7e-08 61.6 121 32.2
TPR.G33511 Trifolium pratense HOM05D005276 ORTHO05D006813 1.3e-07 60.8 74 41.9
AUR62037739 Chenopodium quinoa HOM05D005276 ORTHO05D038198 3.8e-07 59.3 208 26.9
RcHm_v2.0_Chr5g0076801 Rosa chinensis HOM05D005276 ORTHO05D006813 1.1e-06 57.8 97 35.1
vmacro23329 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 5.5e-06 55.5 95 34.7


User provided reference genes

Program Settings