Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr0128s0090 Medicago truncatula HOM05D000007 ORTHO05D000017 2.0e-118 429.1 209 100.0
Medtr4g037465 Medicago truncatula HOM05D000007 ORTHO05D000017 2.9e-61 239.2 141 81.6
Psat3g146120 Pisum sativum HOM05D000007 ORTHO05D000017 6.7e-26 121.7 152 44.7
TPR.G17012 Trifolium pratense HOM05D000007 ORTHO05D000017 7.4e-25 118.2 137 46.0
TPR.G9294 Trifolium pratense HOM05D000007 ORTHO05D000017 1.3e-24 117.5 155 42.6
Medtr7g056820 Medicago truncatula HOM05D000007 ORTHO05D000017 3.8e-21 105.9 148 43.9
Medtr3g013950 Medicago truncatula HOM05D000007 ORTHO05D000017 1.1e-20 104.4 152 40.1
Lj1g0005824 Lotus japonicus HOM05D000007 ORTHO05D000017 3.2e-20 102.8 153 36.6
Medtr0267s0050 Medicago truncatula HOM05D000007 ORTHO05D000017 3.2e-20 102.8 150 39.3
Medtr2g079810 Medicago truncatula HOM05D000007 ORTHO05D000017 1.6e-19 100.5 151 41.1
Lalb_Chr11g0073821 Lupinus albus HOM05D000007 ORTHO05D000017 1.1e-17 94.4 132 37.9
Glyma.08G350400 Glycine max HOM05D000007 ORTHO05D000017 1.9e-17 93.6 147 36.7
Glyma.08G229700 Glycine max HOM05D000007 ORTHO05D000017 7.4e-17 91.7 163 34.4
Glyma.08G260800 Glycine max HOM05D000007 ORTHO05D000017 2.8e-16 89.7 139 38.1
TPR.G24555 Trifolium pratense HOM05D000007 ORTHO05D000017 6.2e-16 88.6 101 44.6
Glyma.17G116300 Glycine max HOM05D000007 ORTHO05D000017 1.4e-15 87.4 169 34.3
VMungo0720G2597 Vigna mungo HOM05D000007 ORTHO05D000017 5.8e-14 82.0 137 35.8
Glyma.08G352900 Glycine max HOM05D000007 ORTHO05D000017 7.6e-14 81.6 149 32.9
Glyma.08G353000 Glycine max HOM05D000007 ORTHO05D000017 7.6e-14 81.6 156 34.6
Glyma.08G134900 Glycine max HOM05D000007 ORTHO05D000017 1.3e-13 80.9 151 33.1
Glyma.05G071600 Glycine max HOM05D000007 ORTHO05D000017 3.8e-13 79.3 149 32.2
Glyma.02G041600 Glycine max HOM05D000007 ORTHO05D000017 8.4e-13 78.2 175 33.1
Phvul.007G235400 Phaseolus vulgaris HOM05D000007 ORTHO05D000017 1.1e-12 77.8 137 35.0
Glyma.05G071400 Glycine max HOM05D000007 ORTHO05D000017 1.9e-12 77.0 157 33.8
Medtr7g056390 Medicago truncatula HOM05D000007 ORTHO05D000017 2.5e-12 76.6 154 33.1
Psat0s2411g0240 Pisum sativum HOM05D000007 ORTHO05D000017 3.2e-12 76.3 139 38.1
arahy.Tifrunner.gnm1.ann1.DVHS31 Arachis hypogaea HOM05D000007 ORTHO05D000017 5.5e-12 75.5 155 32.3
arahy.Tifrunner.gnm1.ann1.YU78V4 Arachis hypogaea HOM05D000007 ORTHO05D000017 5.5e-12 75.5 155 32.3
Ca_06544_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000017 1.2e-11 74.3 148 30.4
TPR.G33907 Trifolium pratense HOM05D000007 ORTHO05D000017 1.2e-11 74.3 191 31.4
Medtr7g056290 Medicago truncatula HOM05D000007 ORTHO05D000017 1.6e-11 73.9 155 34.2
Glyma.05G166200 Glycine max HOM05D000007 ORTHO05D000017 2.1e-11 73.6 139 35.3
Psat0s2411g0160 Pisum sativum HOM05D000007 ORTHO05D000017 3.5e-11 72.8 139 36.7
Phvul.007G113100 Phaseolus vulgaris HOM05D000007 ORTHO05D000017 6.1e-11 72.0 139 33.8
arahy.Tifrunner.gnm1.ann1.0HK6QF Arachis hypogaea HOM05D000007 ORTHO05D000017 1.0e-10 71.2 137 32.8
Ca_06542_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000017 1.0e-10 71.2 139 38.1
Glyma.19G048600 Glycine max HOM05D000007 ORTHO05D000017 1.3e-10 70.9 144 32.6
Medtr7g055870 Medicago truncatula HOM05D000007 ORTHO05D000017 1.3e-10 70.9 169 32.0
Medtr7g055987 Medicago truncatula HOM05D000007 ORTHO05D000017 1.3e-10 70.9 141 36.9
Psat3g149480 Pisum sativum HOM05D000007 ORTHO05D000017 1.3e-10 70.9 152 32.2
Ca_00604_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000017 2.3e-10 70.1 137 33.6
VMungo0720G2115 Vigna mungo HOM05D000007 ORTHO05D000017 2.3e-10 70.1 135 34.8
arahy.Tifrunner.gnm1.ann1.7PDR7X Arachis hypogaea HOM05D000007 ORTHO05D000017 3.0e-10 69.7 137 32.1
Glyma.06G181300 Glycine max HOM05D000007 ORTHO05D000017 3.0e-10 69.7 156 30.1
Glyma.19G049000 Glycine max HOM05D000007 ORTHO05D000017 3.0e-10 69.7 143 32.9
Medtr7g055850 Medicago truncatula HOM05D000007 ORTHO05D000017 3.0e-10 69.7 169 31.4
Medtr7g070440 Medicago truncatula HOM05D000007 ORTHO05D000017 3.0e-10 69.7 179 30.2
Medtr0649s0020 Medicago truncatula HOM05D000007 ORTHO05D000017 3.9e-10 69.3 136 30.9
Glyma.19G048100 Glycine max HOM05D000007 ORTHO05D000017 5.1e-10 68.9 144 32.6
Glyma.19G048200 Glycine max HOM05D000007 ORTHO05D000017 5.1e-10 68.9 144 32.6
Glyma.19G048300 Glycine max HOM05D000007 ORTHO05D000017 5.1e-10 68.9 144 32.6
Medtr7g056003 Medicago truncatula HOM05D000007 ORTHO05D000017 5.1e-10 68.9 145 34.5
TPR.G9301 Trifolium pratense HOM05D000007 ORTHO05D000017 5.1e-10 68.9 140 29.3
Glyma.20G075000 Glycine max HOM05D000007 ORTHO05D000017 6.7e-10 68.6 147 30.6
arahy.Tifrunner.gnm1.ann1.L3WLEE Arachis hypogaea HOM05D000007 ORTHO05D000017 8.7e-10 68.2 139 35.3
Ca_25968_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000017 8.7e-10 68.2 143 33.6
Medtr1g097490 Medicago truncatula HOM05D000007 ORTHO05D000017 8.7e-10 68.2 178 30.3
Medtr2g010900 Medicago truncatula HOM05D000007 ORTHO05D000017 8.7e-10 68.2 138 31.9
Psat1g018880 Pisum sativum HOM05D000007 ORTHO05D000017 8.7e-10 68.2 132 34.1
Ca_10650_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000017 1.1e-09 67.8 138 37.7
arahy.Tifrunner.gnm1.ann1.IGUP8B Arachis hypogaea HOM05D000007 ORTHO05D000017 1.5e-09 67.4 168 29.8
Phvul.007G235100 Phaseolus vulgaris HOM05D000007 ORTHO05D000017 1.5e-09 67.4 141 34.8
Ca_25967_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000017 1.9e-09 67.0 143 34.3
Glyma.19G048800 Glycine max HOM05D000007 ORTHO05D000017 1.9e-09 67.0 139 32.4
Medtr2g010950 Medicago truncatula HOM05D000007 ORTHO05D000017 1.9e-09 67.0 136 31.6
Medtr3g464470 Medicago truncatula HOM05D000007 ORTHO05D000017 1.9e-09 67.0 135 31.1
Glyma.19G048000 Glycine max HOM05D000007 ORTHO05D000017 2.5e-09 66.6 144 32.6
Glyma.19G048500 Glycine max HOM05D000007 ORTHO05D000017 2.5e-09 66.6 146 34.2
Medtr4g024890 Medicago truncatula HOM05D000007 ORTHO05D000017 2.5e-09 66.6 146 31.5
Medtr7g055930 Medicago truncatula HOM05D000007 ORTHO05D000017 2.5e-09 66.6 180 30.0
Medtr1g097560 Medicago truncatula HOM05D000007 ORTHO05D000017 3.3e-09 66.2 136 32.4
Medtr7g050490 Medicago truncatula HOM05D000007 ORTHO05D000017 3.3e-09 66.2 142 35.2
Phvul.007G236000 Phaseolus vulgaris HOM05D000007 ORTHO05D000017 3.3e-09 66.2 69 44.9
Psat3g146480 Pisum sativum HOM05D000007 ORTHO05D000017 4.3e-09 65.9 140 33.6
arahy.Tifrunner.gnm1.ann1.D6FMYT Arachis hypogaea HOM05D000007 ORTHO05D000017 5.7e-09 65.5 143 32.9
Medtr6g053240 Medicago truncatula HOM05D000007 ORTHO05D000017 5.7e-09 65.5 157 31.8
Ca_05139_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000017 7.4e-09 65.1 135 32.6
Lj5g0004910 Lotus japonicus HOM05D000007 ORTHO05D000017 7.4e-09 65.1 133 35.3
Medtr2g043400 Medicago truncatula HOM05D000007 ORTHO05D000017 7.4e-09 65.1 151 33.1
Medtr3g058470 Medicago truncatula HOM05D000007 ORTHO05D000017 7.4e-09 65.1 154 33.1
Medtr3g080370 Medicago truncatula HOM05D000007 ORTHO05D000017 7.4e-09 65.1 132 35.6
Medtr7g066850 Medicago truncatula HOM05D000007 ORTHO05D000017 7.4e-09 65.1 136 32.4
PGSC0003DMG401023052 Solanum tuberosum HOM05D000007 ORTHO05D000017 9.7e-09 64.7 131 33.6
TPR.G20773 Trifolium pratense HOM05D000007 ORTHO05D000017 9.7e-09 64.7 137 34.3
Ca_07595_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000017 1.3e-08 64.3 154 30.5
Medtr7g022600 Medicago truncatula HOM05D000007 ORTHO05D000017 1.3e-08 64.3 141 33.3
Medtr3g072470 Medicago truncatula HOM05D000007 ORTHO05D000017 1.6e-08 63.9 144 34.7
Medtr4g129190 Medicago truncatula HOM05D000007 ORTHO05D000017 1.6e-08 63.9 133 32.3
Medtr7g066010 Medicago truncatula HOM05D000007 ORTHO05D000017 1.6e-08 63.9 142 32.4
Phvul.003G163000 Phaseolus vulgaris HOM05D000007 ORTHO05D000017 1.6e-08 63.9 145 29.7
VMungo1383G2748 Vigna mungo HOM05D000007 ORTHO05D000017 1.6e-08 63.9 140 31.4
Ca_10652_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000017 2.2e-08 63.5 140 32.9
Glyma.02G188000 Glycine max HOM05D000007 ORTHO05D000017 2.2e-08 63.5 168 33.3
Medtr4g024870 Medicago truncatula HOM05D000007 ORTHO05D000017 2.2e-08 63.5 138 33.3
Medtr7g050520 Medicago truncatula HOM05D000007 ORTHO05D000017 2.8e-08 63.2 142 34.5
Lj5g0009403 Lotus japonicus HOM05D000007 ORTHO05D000017 3.7e-08 62.8 135 32.6
Medtr2g043410 Medicago truncatula HOM05D000007 ORTHO05D000017 3.7e-08 62.8 156 31.4
Medtr4g019990 Medicago truncatula HOM05D000007 ORTHO05D000017 3.7e-08 62.8 143 34.3
TPR.G794 Trifolium pratense HOM05D000007 ORTHO05D000017 3.7e-08 62.8 137 33.6
Lj3P550T16 Lonicera japonica HOM05D000007 ORTHO05D000017 4.8e-08 62.4 137 34.3
arahy.Tifrunner.gnm1.ann1.40BVCW Arachis hypogaea HOM05D000007 ORTHO05D000017 6.3e-08 62.0 134 30.6
arahy.Tifrunner.gnm1.ann1.L3R8Y5 Arachis hypogaea HOM05D000007 ORTHO05D000017 6.3e-08 62.0 138 33.3
Medtr3g437520 Medicago truncatula HOM05D000007 ORTHO05D000017 6.3e-08 62.0 159 31.4
arahy.Tifrunner.gnm1.ann1.T4T6Y3 Arachis hypogaea HOM05D000007 ORTHO05D000017 8.2e-08 61.6 138 32.6
Medtr2g047892 Medicago truncatula HOM05D000007 ORTHO05D000017 8.2e-08 61.6 137 30.7
Medtr7g091630 Medicago truncatula HOM05D000007 ORTHO05D000017 8.2e-08 61.6 135 31.9
Peaxi162Scf00613g00031 Petunia axillaris HOM05D000007 ORTHO05D000017 8.2e-08 61.6 106 42.5
TPR.G30820 Trifolium pratense HOM05D000007 ORTHO05D000017 8.2e-08 61.6 137 31.4
Medtr4g107780 Medicago truncatula HOM05D000007 ORTHO05D000017 1.1e-07 61.2 139 32.4
Medtr4g107820 Medicago truncatula HOM05D000007 ORTHO05D000017 1.1e-07 61.2 139 32.4
Medtr3g464500 Medicago truncatula HOM05D000007 ORTHO05D000017 1.4e-07 60.8 135 33.3
Psat3g146320 Pisum sativum HOM05D000007 ORTHO05D000017 1.4e-07 60.8 134 29.9
CAN.G949.9 Capsicum annuum HOM05D000033 ORTHO05D000017 1.8e-07 60.5 197 26.9
Medtr7g052150 Medicago truncatula HOM05D000007 ORTHO05D000017 1.8e-07 60.5 137 35.8
arahy.Tifrunner.gnm1.ann1.XAL4KA Arachis hypogaea HOM05D000007 ORTHO05D000017 2.4e-07 60.1 133 32.3
Ca_10651_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000017 2.4e-07 60.1 140 34.3
Ca_10654_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000017 2.4e-07 60.1 140 34.3
Medtr7g066830 Medicago truncatula HOM05D000007 ORTHO05D000017 2.4e-07 60.1 142 31.7
arahy.Tifrunner.gnm1.ann1.D1G4W2 Arachis hypogaea HOM05D000007 ORTHO05D000017 3.1e-07 59.7 136 30.1
Dinv38256 Davidia involucrata HOM05D000007 ORTHO05D000017 3.1e-07 59.7 143 32.9
Medtr1g057890 Medicago truncatula HOM05D000007 ORTHO05D000017 3.1e-07 59.7 140 28.6
Medtr2g029990 Medicago truncatula HOM05D000007 ORTHO05D000017 3.1e-07 59.7 143 31.5
Medtr2g055970 Medicago truncatula HOM05D000007 ORTHO05D000017 3.1e-07 59.7 149 31.5
Nitab4.5_0000306g0270 Nicotiana tabacum HOM05D000007 ORTHO05D000017 3.1e-07 59.7 159 30.8
Peaxi162Scf00912g00112 Petunia axillaris HOM05D000007 ORTHO05D000017 3.1e-07 59.7 70 45.7
Psat5g230600 Pisum sativum HOM05D000007 ORTHO05D000017 3.1e-07 59.7 140 27.1
Psat6g012160 Pisum sativum HOM05D000007 ORTHO05D000017 3.1e-07 59.7 141 33.3
TPR.G17061 Trifolium pratense HOM05D000007 ORTHO05D000017 3.1e-07 59.7 135 31.9
arahy.Tifrunner.gnm1.ann1.8T5694 Arachis hypogaea HOM05D000007 ORTHO05D000017 4.1e-07 59.3 137 30.7
arahy.Tifrunner.gnm1.ann1.M46UPZ Arachis hypogaea HOM05D000007 ORTHO05D000017 4.1e-07 59.3 136 30.9
TPR.G19021 Trifolium pratense HOM05D000007 ORTHO05D000017 4.1e-07 59.3 136 32.4
Glyma.10G220500 Glycine max HOM05D000007 ORTHO05D000017 5.3e-07 58.9 148 33.1
Medtr4g033495 Medicago truncatula HOM05D000007 ORTHO05D000017 5.3e-07 58.9 146 29.5
Medtr6g016285 Medicago truncatula HOM05D000007 ORTHO05D000017 5.3e-07 58.9 132 34.1
Nitab4.5_0000941g0230 Nicotiana tabacum HOM05D000007 ORTHO05D000017 5.3e-07 58.9 150 34.7
arahy.Tifrunner.gnm1.ann1.JF2XVI Arachis hypogaea HOM05D000007 ORTHO05D000017 6.9e-07 58.5 137 30.7
Ca_06553_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000017 6.9e-07 58.5 159 29.6
Medtr2g046920 Medicago truncatula HOM05D000007 ORTHO05D000017 6.9e-07 58.5 136 30.9
Medtr6g017270 Medicago truncatula HOM05D000007 ORTHO05D000017 6.9e-07 58.5 137 32.1
Psat0s1287g0040 Pisum sativum HOM05D000007 ORTHO05D000017 6.9e-07 58.5 138 29.0
Psat3g123960 Pisum sativum HOM05D000007 ORTHO05D000017 6.9e-07 58.5 143 28.0
arahy.Tifrunner.gnm1.ann1.HR5IAZ Arachis hypogaea HOM05D000007 ORTHO05D000017 9.0e-07 58.2 138 32.6
arahy.Tifrunner.gnm1.ann1.KM85J5 Arachis hypogaea HOM05D000007 ORTHO05D000017 9.0e-07 58.2 137 31.4
Medtr7g056710 Medicago truncatula HOM05D000007 ORTHO05D000017 9.0e-07 58.2 134 32.8
Nitab4.5_0002205g0080 Nicotiana tabacum HOM05D000007 ORTHO05D000017 9.0e-07 58.2 159 30.8
PGSC0003DMG400029657 Solanum tuberosum HOM05D000007 ORTHO05D000017 9.0e-07 58.2 142 34.5
Medtr1g046600 Medicago truncatula HOM05D000007 ORTHO05D000017 1.2e-06 57.8 166 28.9
Medtr2g046800 Medicago truncatula HOM05D000007 ORTHO05D000017 1.2e-06 57.8 71 45.1
Medtr5g056020 Medicago truncatula HOM05D000007 ORTHO05D000017 1.2e-06 57.8 137 32.8
Medtr7g050480 Medicago truncatula HOM05D000007 ORTHO05D000017 1.2e-06 57.8 142 33.1
Medtr7g091640 Medicago truncatula HOM05D000007 ORTHO05D000017 1.2e-06 57.8 136 30.9
Medtr1g054575 Medicago truncatula HOM05D000007 ORTHO05D000017 1.5e-06 57.4 131 32.1
Medtr3g007430 Medicago truncatula HOM05D000007 ORTHO05D000017 1.5e-06 57.4 146 29.5
TPR.G19014 Trifolium pratense HOM05D000007 ORTHO05D000017 1.5e-06 57.4 136 33.8
arahy.Tifrunner.gnm1.ann1.4EH76Y Arachis hypogaea HOM05D000007 ORTHO05D000017 2.0e-06 57.0 137 31.4
Ciclev10006995m.g Citrus clementina HOM05D000007 ORTHO05D000017 2.0e-06 57.0 147 31.3
Lj3P552T16 Lonicera japonica HOM05D000007 ORTHO05D000017 2.0e-06 57.0 137 34.3
Peaxi162Scf00237g00312 Petunia axillaris HOM05D000007 ORTHO05D000017 2.0e-06 57.0 72 43.1
Solyc09g072910.3 Solanum lycopersicum HOM05D000007 ORTHO05D000017 2.0e-06 57.0 128 31.2
arahy.Tifrunner.gnm1.ann1.REKI49 Arachis hypogaea HOM05D000007 ORTHO05D000017 2.6e-06 56.6 136 30.9
Medtr0464s0020 Medicago truncatula HOM05D000007 ORTHO05D000017 2.6e-06 56.6 156 28.8
Medtr2g021190 Medicago truncatula HOM05D000007 ORTHO05D000017 2.6e-06 56.6 133 33.1
Medtr4g129160 Medicago truncatula HOM05D000007 ORTHO05D000017 2.6e-06 56.6 156 31.4
Peaxi162Scf00047g00848 Petunia axillaris HOM05D000007 ORTHO05D000017 2.6e-06 56.6 72 40.3
Peaxi162Scf00718g00028 Petunia axillaris HOM05D000007 ORTHO05D000017 2.6e-06 56.6 67 47.8
CAN.G162.144 Capsicum annuum HOM05D000007 ORTHO05D000017 3.4e-06 56.2 136 33.8
Glyma.13G114400 Glycine max HOM05D000007 ORTHO05D000017 3.4e-06 56.2 129 33.3
Medtr7g056570 Medicago truncatula HOM05D000007 ORTHO05D000017 3.4e-06 56.2 142 28.9
Psat1g057600 Pisum sativum HOM05D000007 ORTHO05D000017 3.4e-06 56.2 144 27.8
VMungo0464G0235 Vigna mungo HOM05D000007 ORTHO05D000017 3.4e-06 56.2 139 29.5
Medtr7g079160 Medicago truncatula HOM05D000007 ORTHO05D000017 4.5e-06 55.8 179 26.8
Peaxi162Scf00047g00844 Petunia axillaris HOM05D000007 ORTHO05D000017 4.5e-06 55.8 92 41.3
CAN.G337.168 Capsicum annuum HOM05D000007 ORTHO05D011077 5.9e-06 55.5 98 37.8
Medtr7g061012 Medicago truncatula HOM05D000007 ORTHO05D000017 5.9e-06 55.5 140 27.9
Medtr7g061050 Medicago truncatula HOM05D000007 ORTHO05D000017 5.9e-06 55.5 143 28.7
Peaxi162Scf00246g00812 Petunia axillaris HOM05D000007 ORTHO05D000017 5.9e-06 55.5 163 27.6
Medtr1g442850 Medicago truncatula HOM05D000007 ORTHO05D000017 7.7e-06 55.1 136 30.1
Oeu022123.1 Olea europaea HOM05D000007 ORTHO05D000017 7.7e-06 55.1 141 29.1
SGA_v2.0_scaffold104G30094 Striga asiatica HOM05D000007 ORTHO05D000017 7.7e-06 55.1 164 30.5
TPR.G18856 Trifolium pratense HOM05D000007 ORTHO05D000017 7.7e-06 55.1 138 31.9
arahy.Tifrunner.gnm1.ann1.J50TIT Arachis hypogaea HOM05D000007 ORTHO05D000017 1.0e-05 54.7 135 28.1
Medtr7g103140 Medicago truncatula HOM05D000007 ORTHO05D000017 1.0e-05 54.7 105 31.4
PSO478G0592 Papaver somniferum HOM05D000007 ORTHO05D000017 1.0e-05 54.7 137 29.2


User provided reference genes

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