Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr0052s0090 Medicago truncatula HOM05D006450 ORTHO05D001777 5.1e-47 190.7 92 100.0
arahy.Tifrunner.gnm1.ann1.IBA4PL Arachis hypogaea HOM05D006450 ORTHO05D001777 1.2e-32 142.9 125 63.2
Medtr0055s0140 Medicago truncatula HOM05D000099 ORTHO05D000205 1.8e-28 129.0 101 68.3
Nn061s42067 Nelumbo nucifera HOM05D006450 ORTHO05D001777 2.9e-26 121.7 119 58.0
Nn069s42367 Nelumbo nucifera HOM05D006450 ORTHO05D001777 2.9e-26 121.7 119 58.0
Nn098s43115 Nelumbo nucifera HOM05D006450 ORTHO05D001777 2.9e-26 121.7 119 58.0
Nn119s43472 Nelumbo nucifera HOM05D006450 ORTHO05D001777 2.9e-26 121.7 119 58.0
Nn139s43902 Nelumbo nucifera HOM05D006450 ORTHO05D001777 2.9e-26 121.7 119 58.0
Nn185s44669 Nelumbo nucifera HOM05D006450 ORTHO05D001777 2.9e-26 121.7 119 58.0
Nn208s45111 Nelumbo nucifera HOM05D006450 ORTHO05D001777 2.9e-26 121.7 119 58.0
Nn227s45449 Nelumbo nucifera HOM05D006450 ORTHO05D001777 2.9e-26 121.7 119 58.0
Nn247s45810 Nelumbo nucifera HOM05D006450 ORTHO05D001777 2.9e-26 121.7 119 58.0
Nn273s46056 Nelumbo nucifera HOM05D006450 ORTHO05D001777 2.9e-26 121.7 119 58.0
Nn5g28945 Nelumbo nucifera HOM05D006450 ORTHO05D001777 2.9e-26 121.7 119 58.0
LjContig00372g0003179 Lotus japonicus HOM05D006450 ORTHO05D001777 3.8e-26 121.3 90 72.2
LjContig00479g0011945 Lotus japonicus HOM05D006450 ORTHO05D001777 3.8e-26 121.3 90 72.2
LjContig00006g0004286 Lotus japonicus HOM05D006450 ORTHO05D001777 9.4e-25 116.7 89 70.8
unitig_102.g31719 Utricularia gibba HOM05D006450 ORTHO05D001777 9.4e-25 116.7 70 85.7
arahy.Tifrunner.gnm1.ann1.XK9GFX Arachis hypogaea HOM05D006450 ORTHO05D001777 3.0e-23 111.7 122 55.7
arahy.Tifrunner.gnm1.ann1.W08C9D Arachis hypogaea HOM05D006450 ORTHO05D001777 5.2e-23 110.9 122 54.9
arahy.Tifrunner.gnm1.ann1.U7NBP2 Arachis hypogaea HOM05D006450 ORTHO05D001777 8.8e-23 110.2 103 60.2
arahy.Tifrunner.gnm1.ann1.Y3V93U Arachis hypogaea HOM05D006450 ORTHO05D001777 8.8e-23 110.2 103 60.2
arahy.Tifrunner.gnm1.ann1.N4E4FQ Arachis hypogaea HOM05D006450 ORTHO05D001777 3.4e-22 108.2 103 59.2
arahy.Tifrunner.gnm1.ann1.IKKG03 Arachis hypogaea HOM05D006450 ORTHO05D001777 5.7e-22 107.5 103 59.2
Medtr0055s0050 Medicago truncatula HOM05D000099 ORTHO05D000205 5.7e-22 107.5 105 59.0
arahy.Tifrunner.gnm1.ann1.DBUY86 Arachis hypogaea HOM05D006450 ORTHO05D001777 4.8e-21 104.4 103 57.3
unitig_813.g34363 Utricularia gibba HOM05D006450 ORTHO05D001777 6.3e-21 104.0 103 58.3
BNapus_Darmor_BZH_scaffold_107p00140 Brassica napus HOM05D006450 ORTHO05D001777 5.4e-20 100.9 98 59.2
unitig_807.g34415 Utricularia gibba HOM05D006450 ORTHO05D001777 1.2e-19 99.8 103 54.4
Medtr0152s0090 Medicago truncatula HOM05D000099 ORTHO05D000205 1.6e-19 99.4 103 55.3
unitig_668.g29656 Utricularia gibba HOM05D006450 ORTHO05D001777 1.6e-19 99.4 103 56.3
A06p23620 Brassica napus HOM05D006450 ORTHO05D001777 4.5e-19 97.8 102 55.9
A06p23730 Brassica napus HOM05D006450 ORTHO05D001777 7.7e-19 97.1 111 53.2
arahy.Tifrunner.gnm1.ann1.4EJ54G Arachis hypogaea HOM05D006450 ORTHO05D001777 1.1e-17 93.2 96 55.2
arahy.Tifrunner.gnm1.ann1.FM2NH1 Arachis hypogaea HOM05D006450 ORTHO05D001777 1.1e-17 93.2 96 55.2
arahy.Tifrunner.gnm1.ann1.PJI1IR Arachis hypogaea HOM05D006450 ORTHO05D001777 1.1e-17 93.2 96 55.2
A06p24890 Brassica napus HOM05D006450 ORTHO05D001777 1.1e-17 93.2 98 59.2
Duzib093G0876 Durio zibethinus HOM05D006450 ORTHO05D001777 1.1e-17 93.2 103 52.4
A09p31040 Brassica napus HOM05D006450 ORTHO05D001777 1.9e-17 92.4 98 58.2
arahy.Tifrunner.gnm1.ann1.HX86U3 Arachis hypogaea HOM05D006450 ORTHO05D001777 2.5e-17 92.0 111 50.5
A09p31260 Brassica napus HOM05D006450 ORTHO05D001777 3.2e-17 91.7 112 50.0
A06p25420 Brassica napus HOM05D006450 ORTHO05D001777 4.2e-17 91.3 112 49.1
arahy.Tifrunner.gnm1.ann1.CY7VGA Arachis hypogaea HOM05D006450 ORTHO05D001777 9.5e-17 90.1 96 54.2
A06p24400 Brassica napus HOM05D006450 ORTHO05D001777 9.5e-17 90.1 118 46.6
arahy.Tifrunner.gnm1.ann1.GBJ0Q2 Arachis hypogaea HOM05D006450 ORTHO05D001777 1.6e-16 89.4 96 54.2
A06p25330 Brassica napus HOM05D006450 ORTHO05D001777 1.6e-16 89.4 110 50.0
arahy.Tifrunner.gnm1.ann1.JLZP6T Arachis hypogaea HOM05D006450 ORTHO05D001777 4.7e-16 87.8 95 52.6
A06p24520 Brassica napus HOM05D006450 ORTHO05D001777 6.1e-16 87.4 110 50.0
A05p22370 Brassica napus HOM05D006450 ORTHO05D001777 8.0e-16 87.0 116 45.7
A06p24320 Brassica napus HOM05D006450 ORTHO05D001777 8.0e-16 87.0 108 50.0
arahy.Tifrunner.gnm1.ann1.M1SIGC Arachis hypogaea HOM05D006450 ORTHO05D001777 1.4e-15 86.3 96 52.1
A06p24330 Brassica napus HOM05D006450 ORTHO05D001777 1.8e-15 85.9 106 50.9
arahy.Tifrunner.gnm1.ann1.59N28G Arachis hypogaea HOM05D006450 ORTHO05D007849 2.3e-15 85.5 39 100.0
arahy.Tifrunner.gnm1.ann1.DW5R15 Arachis hypogaea HOM05D006450 ORTHO05D007849 2.3e-15 85.5 39 100.0
Lj5g0003833 Lotus japonicus HOM05D007851 ORTHO05D007849 2.3e-15 85.5 39 100.0
LjContig00371g0016194 Lotus japonicus HOM05D000099 ORTHO05D000205 2.3e-15 85.5 39 100.0
LjContig00547g0007783 Lotus japonicus HOM05D007851 ORTHO05D007849 2.3e-15 85.5 39 100.0
unitig_124.g30877 Utricularia gibba HOM05D006450 ORTHO05D001777 2.3e-15 85.5 39 100.0
unitig_245.g35376 Utricularia gibba HOM05D006450 ORTHO05D007849 2.3e-15 85.5 39 100.0
unitig_579.g34820 Utricularia gibba HOM05D007851 ORTHO05D007849 2.3e-15 85.5 39 100.0
unitig_587.g34769 Utricularia gibba HOM05D007851 ORTHO05D007849 2.3e-15 85.5 39 100.0
unitig_644.g34716 Utricularia gibba HOM05D006450 ORTHO05D001777 2.3e-15 85.5 39 100.0
unitig_836.g33490 Utricularia gibba HOM05D011479 ORTHO05D007849 2.3e-15 85.5 39 100.0
unitig_96.g33467 Utricularia gibba HOM05D011479 ORTHO05D007849 2.3e-15 85.5 39 100.0
A07p06160 Brassica napus HOM05D006450 ORTHO05D001777 3.0e-15 85.1 109 45.9
Duzib093G0575 Durio zibethinus HOM05D006450 ORTHO05D001777 4.0e-15 84.7 103 48.5
A06p23720 Brassica napus HOM05D006450 ORTHO05D001777 8.8e-15 83.6 39 97.4
A06p23840 Brassica napus HOM05D006450 ORTHO05D001777 8.8e-15 83.6 39 97.4
A06p24610 Brassica napus HOM05D006450 ORTHO05D001777 8.8e-15 83.6 39 97.4
A09p30690 Brassica napus HOM05D006450 ORTHO05D001777 8.8e-15 83.6 39 97.4
BNapus_Darmor_BZH_scaffold_107p00070 Brassica napus HOM05D006450 ORTHO05D001777 8.8e-15 83.6 39 97.4
Cpa.g.sc2112.1 Carica papaya HOM05D007851 ORTHO05D007849 8.8e-15 83.6 39 97.4
Migut.A01237 Erythranthe guttata HOM05D006450 ORTHO05D001777 8.8e-15 83.6 39 97.4
RhsimUnG0208900 Rhododendron simsii HOM05D006450 ORTHO05D001777 8.8e-15 83.6 39 97.4
Sc14g0003720 Simmondsia chinensis HOM05D013320 ORTHO05D387512 8.8e-15 83.6 39 97.4
Sc14g0004240 Simmondsia chinensis HOM05D006450 ORTHO05D001777 8.8e-15 83.6 39 97.4
BNapus_Darmor_BZH_scaffold_192p00010 Brassica napus HOM05D006450 ORTHO05D001777 1.2e-14 83.2 38 97.4
arahy.Tifrunner.gnm1.ann1.Y74ICM Arachis hypogaea HOM05D006450 ORTHO05D001777 1.5e-14 82.8 38 100.0
A06p23660 Brassica napus HOM05D006450 ORTHO05D001777 2.6e-14 82.0 39 94.9
arahy.Tifrunner.gnm1.ann1.VCF5QC Arachis hypogaea HOM05D000099 ORTHO05D000205 4.4e-14 81.3 39 97.4
A06p23850 Brassica napus HOM05D006450 ORTHO05D001777 4.4e-14 81.3 39 94.9
A06p24630 Brassica napus HOM05D006450 ORTHO05D001777 9.8e-14 80.1 39 94.9
A09p30950 Brassica napus HOM05D006450 ORTHO05D001777 9.8e-14 80.1 39 92.3
A05p22240 Brassica napus HOM05D006450 ORTHO05D001777 2.2e-13 79.0 39 89.7
A06p24560 Brassica napus HOM05D006450 ORTHO05D001777 3.7e-13 78.2 45 82.2
Sed0026508 Sechium edule HOM05D003742 ORTHO05D001777 4.9e-13 77.8 37 94.6
unitig_8.g4071 Utricularia gibba HOM05D006450 ORTHO05D001777 4.9e-13 77.8 38 92.1
Cpa.g.sc121.11 Carica papaya HOM05D006450 ORTHO05D001777 2.4e-12 75.5 76 53.9
RhsimUnG0208400 Rhododendron simsii HOM05D000099 ORTHO05D000205 4.1e-12 74.7 34 97.1
Duzib093G1336 Durio zibethinus HOM05D006450 ORTHO05D001777 5.4e-12 74.3 38 86.8
CAN.G13509.1 Capsicum annuum HOM05D007851 ORTHO05D007849 9.2e-12 73.6 39 87.2
BNapus_Darmor_BZH_scaffold_181p00010 Brassica napus HOM05D006450 ORTHO05D001777 1.1e-09 66.6 88 47.7
arahy.Tifrunner.gnm1.ann1.FM8SZR Arachis hypogaea HOM05D006450 ORTHO05D001777 1.5e-09 66.2 96 41.7
Lj2g0016942 Lotus japonicus HOM05D000099 ORTHO05D000205 3.3e-09 65.1 29 100.0
LjContig00098g0020910 Lotus japonicus HOM05D000099 ORTHO05D000205 3.3e-09 65.1 29 100.0
Mapoly0011s0192 Marchantia polymorpha HOM05D006450 ORTHO05D001777 2.8e-08 62.0 38 76.3
Lj2g0005038 Lotus japonicus HOM05D000099 ORTHO05D000205 3.6e-08 61.6 53 62.3
Medtr0152s0120 Medicago truncatula HOM05D000099 ORTHO05D000205 4.7e-08 61.2 30 86.7
Medtr0055s0090 Medicago truncatula HOM05D000099 ORTHO05D000205 1.8e-07 59.3 90 44.4
SHI35529 Sapria himalayana HOM05D000099 ORTHO05D000205 1.8e-07 59.3 55 56.4
SHI35534 Sapria himalayana HOM05D000099 ORTHO05D000205 1.8e-07 59.3 55 56.4
SHI35537 Sapria himalayana HOM05D000099 ORTHO05D000205 1.8e-07 59.3 55 56.4
SHI38617 Sapria himalayana HOM05D000099 ORTHO05D000205 1.8e-07 59.3 55 56.4
SHI38620 Sapria himalayana HOM05D000099 ORTHO05D000205 1.8e-07 59.3 55 56.4
SHI39807 Sapria himalayana HOM05D000099 ORTHO05D000205 1.8e-07 59.3 55 56.4
SHI39842 Sapria himalayana HOM05D000099 ORTHO05D000205 1.8e-07 59.3 55 56.4
SHI41311 Sapria himalayana HOM05D000099 ORTHO05D000205 1.8e-07 59.3 55 56.4
Medtr0052s0150 Medicago truncatula HOM05D000099 ORTHO05D000205 6.8e-07 57.4 25 100.0
SHI27865 Sapria himalayana HOM05D000099 ORTHO05D000205 6.8e-07 57.4 54 57.4
unitig_813.g34373 Utricularia gibba HOM05D000099 ORTHO05D002059 2.0e-06 55.8 24 100.0
arahy.Tifrunner.gnm1.ann1.6AY1PL Arachis hypogaea HOM05D000099 ORTHO05D000205 4.4e-06 54.7 76 46.1
SHI17753 Sapria himalayana HOM05D000099 ORTHO05D000205 5.7e-06 54.3 28 89.3
Duzib147G1173 Durio zibethinus HOM05D000099 ORTHO05D000205 7.5e-06 53.9 37 67.6
Nn252s45879 Nelumbo nucifera HOM05D002905 ORTHO05D001777 7.5e-06 53.9 32 84.4
unitig_631.g33698 Utricularia gibba HOM05D006450 ORTHO05D001777 9.8e-06 53.5 78 44.9


User provided reference genes

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